AAA proteins
The basic recognition of proteins by AAAs is thought to occur through unfolded protein domains in the substrate protein. In ... disassembly of protein complexes and protein aggregates. Dyneins, one of the three major classes of motor protein, are AAA ... AAA proteins or ATPases Associated with diverse cellular Activities are a protein family sharing a common conserved module of ... This is a large, functionally diverse protein family belonging to the AAA+ protein superfamily of ring-shaped P-loop NTPases, ...
Proteins@home
"proteins@home". 2007-03-15. Archived from the original on 2007-03-15. Retrieved 2022-09-20. proteins@home archive v t e v t e ( ... proteins@home was a large-scale non-profit protein structure prediction project utilizing volunteer computing to perform ... This large-scale mapping of protein sequence space will have applications for predicting protein structure and function, for ... proteins@home was a volunteer computing project that used the BOINC architecture. The project was run by the Department of ...
PIN proteins
... are integral membrane proteins in plants that transport the anionic form of the hormone auxin across membranes. ... These PIN proteins regulate the partitioning of auxin within the cell. The PM-localized PIN proteins physically interact with a ... Most of the PIN proteins (e.g. PIN1/2/3/4/7 in the model plant Arabidopsis thaliana) localize at the plasma membrane (PM) where ... v t e v t e (Articles with short description, Short description matches Wikidata, Plant proteins, All stub articles, Plant ...
FOX proteins
Forkhead proteins are a subgroup of the helix-turn-helix class of proteins. Many genes encoding FOX proteins have been ... Many FOX proteins are important to embryonic development. FOX proteins also have pioneering transcription activity by being ... FOX (forkhead box) proteins are a family of transcription factors that play important roles in regulating the expression of ... The defining feature of FOX proteins is the forkhead box, a sequence of 80 to 100 amino acids forming a motif that binds to DNA ...
SIR proteins
Instead, it relies on other SIR proteins to find its appropriate silencing target. In the SIR protein complex, SIR2 removes ... Silent Information Regulator (SIR) proteins are involved in regulating gene expression. SIR proteins organize heterochromatin ... "Evidence that a complex of SIR proteins interacts with the silencer and telomere-binding protein RAP1". Genes & Development. 8 ... In yeast, SIR proteins bind sites on nucleosome tails and form a multimeric compound of SIR2,3,4 that condenses chromatin and ...
FANC proteins
... are a group of proteins associated with Fanconi anemia. They are involved in DNA replication and damage response ... Components include: core protein complex (FANCA, FANCB, FANCC, FANCE, FANCF, FANCG, FANCL, FANCM) other: FANCD1, FANCD2, FANCI ... v t e (Articles with short description, Short description matches Wikidata, DNA repair, Protein families, All stub articles, ... FANCJ, FANCN, FANCP FANC+Proteins at the U.S. National Library of Medicine Medical Subject Headings (MeSH) Naim V, Rosselli F ( ...
Notch proteins
... are a family of type-1 transmembrane proteins that form a core component of the Notch signaling pathway, which ... Notch-2 (Neurogenic locus notch homolog protein 2) is a protein that in humans is encoded by the NOTCH2 gene. NOTCH2 is ... These type 1 single pass transmembrane proteins fall into the Delta/Serrate/Lag-2 (DSL) family of proteins which is named after ... This article incorporates text from the public domain Pfam and InterPro: IPR000800 (Protein pages needing a picture, Protein ...
IFIT proteins
The IFIT proteins that are produced in humans and mice are 40%-45% similar. It is thought that the gene encoding IFIT proteins ... IFIT proteins (Interferon Induced proteins with Tetratricopeptide repeats) are produced in the human body and are supposed to ... Birds, marsupials, frogs and fish have been found to produce only IFIT5 type proteins. These proteins differ from each other in ... IFIT proteins are suggested to show anti viral activity in two ways; one, by binding specifically to viral nucleic acids and ...
Proteins (journal)
In addition, Proteins includes a section entitled "Section Notes", describing novel protein structures. Proteins is abstracted ... Proteins: Structure, Function, and Bioinformatics is a monthly peer-reviewed scientific journal published by John Wiley & Sons ... "Proteins: Structure, Function, and Bioinformatics". 2020 Journal Citation Reports. Web of Science (Science ed.). Thomson ... The journal covers research on all aspects protein biochemistry, including computation, function, structure, design, and ...
SIBLING proteins
The family of non-collagenous proteins known as SIBLING proteins, standing for small integrin-binding ligand, N-linked ... The following are categorized as SIBLING proteins: osteopontin (OPN) bone sialoprotein (BSP) dentin matrix protein 1 (DMP1) ... Qin, C.; Baba, O.; Butler, W.T. (2004). "Post-Translational Modifications of Sibling Proteins and Their Roles in Osteogenesis ... Evidence shows that these proteins play key roles in the mineralization of these tissues. ...
Duffy binding proteins
A duffy-binding-like domain is also found in proteins of the family Plasmodium falciparum erythrocyte membrane protein 1. ... This article incorporates text from the public domain Pfam and InterPro: IPR008602 (Protein pages needing a picture, Protein ... The other universal invasion protein is reticulocyte binding protein homologs. Both families are essential for cell invasion, ... The presence of duffy-binding-like domains defines the family of erythrocyte binding-like proteins (EBL), a family of cell ...
Complex lasso proteins
... (also called pierced lasso bundles or tadpoles) are proteins in which a covalent loop (portion of the ... In particular, the loops may pierce each other, forming a protein Hopf link. There are much less complex lassos in proteins ... and ester-based complex lasso proteins are known. Around 18% of proteins with disulfide bridges have complex lasso, however, ... On the other hand, the motif was shown to be functional in case of leptin - the obesity-related protein. The analysis of the ...
Iron-binding proteins
Heme proteins are proteins that contain a heme prosthetic group. The heme group consists of a porphyrin ring coordinated with ... Iron-binding proteins are carrier proteins and metalloproteins that are important in iron metabolism and the immune response. ... Iron-sulfur proteins are those with an iron structure that includes sulfur. There are a variety of forms iron and sulfur can ... These proteins act as electron shuttles by switching the oxidation state of the heme iron atom between ferrous (Fe2+) and ...
Bacteriophage scaffolding proteins
240 copies of protein D form the external scaffold, while 60 copies of protein B form the internal scaffold. The role of ... The assembly process is aided by scaffolding proteins, which act as chaperones. In bacteriophage, scaffolding proteins B and D ... In molecular biology, bacteriophage scaffolding proteins are proteins involved in bacteriophage assembly. The assembly of a ... scaffolding protein D is in the production of viral single-stranded RNA. Dokland T, McKenna R, Ilag LL, Bowman BR, Incardona NL ...
Toroid repeat proteins
Closed solenoids frequently function as protein-protein interaction modules: it is possible that all repeats must be present to ... A toroid repeat is a protein fold composed of repeating subunits, arranged in circular fashion to form a closed structure. In ... The following major sub-classes of toroid repeat proteins can be found: TIM barrel structures composed of eight units with ... Chen CK, Chan NL, Wang AH (October 2011). "The many blades of the β-propeller proteins: conserved but versatile". Trends ...
Thyroxine-binding proteins
Human proteins, Blood proteins, All stub articles, Protein stubs). ... A thyroxine-binding protein is any of several transport proteins that bind thyroid hormone and carry it around the bloodstream ... Examples include: Thyroxine-binding globulin Transthyretin Serum albumin Thyroxine-binding+proteins at the U.S. National ...
Tight junction proteins
Some of TJ proteins act as a scaffolds, that connect integral proteins with the actin in a cytoskeleton. Others have an ability ... TJ proteins could be divided in different groups according to their function or localization in tight junction. TJ proteins are ... Tight junction proteins (TJ proteins) are molecules situated at the tight junctions of epithelial, endothelial and myelinated ... JAM4 has a cell adhesion activity, which is conducted by MAGI-1. Protein 0 is a major myelin protein of the peripheral nervous ...
Polycomb-group proteins
... (PcG proteins) are a family of protein complexes first discovered in fruit flies that can remodel ... PcGs proteins are evolutionarily conserved and exist in at least two separate protein complexes; the PcG repressive complex 1 ( ... Aichinger E, Villar CB, Farrona S, Reyes JC, Hennig L, Köhler C (August 2009). "CHD3 proteins and polycomb group proteins ... PRC1 PRC2 PHC1 PHC2 Heterochromatin protein 1 (Cbx) BMI1 PCGF1, KDM2B PCGF2 (Polycomb group RING finger protein 2) ortolog Bmi1 ...
Tardigrade specific proteins
... are types of intrinsically disordered proteins specific to tardigrades. These proteins help ... These proteins are similar to late embryogenesis abundant proteins but are specific to tardigrades. The three families do not ... Tardigrade specific proteins are a type of intrinsically disordered proteins, which have no predetermined shape or task. These ... Unlike traditional proteins, intrinsically disordered proteins do not precipitate out of solution or denature during high heat ...
Major urinary proteins
... (Mups), also known as α2u-globulins, are a subfamily of proteins found in abundance in the urine and ... Along with other members of the lipocalin protein family, major urinary proteins can be potent allergens to humans. The reason ... February 2001). "Effect of polymorphisms on ligand binding by mouse major urinary proteins". Protein Science. 10 (2): 411-7. ... "Structural basis of pheromone binding to mouse major urinary protein (MUP-I)". Protein Science. 10 (5): 997-1004. doi:10.1110/ ...
Cyanobacterial clock proteins
The cyanobacterial clock proteins comprise three proteins: KaiA, KaiB and KaiC. The kaiABC complex may act as a promoter- ... The KaiA protein from Anabaena sp. (strain PCC 7120) lacks the N-terminal CheY-like domain. KaiB adopts an alpha-beta meander ... In both systems the circadian period is dependent on the interactions between proteins within the cell, and when the genes for ... Garces RG, Wu N, Gillon W, Pai EF (April 2004). "Anabaena circadian clock proteins KaiA and KaiB reveal a potential common ...
International Therapeutic Proteins
Corporate website: itproteins.com International Therapeutic Proteins Ltd 2010 "International Therapeutic Proteins - Tasmania, ... A dedicated protein separation facility is used for all antitoxin products. This consists of an upstream (pre viral ... International Therapeutic Proteins (known as ITP) was created in 2006. The company supplies antitoxins, antidotes to snake ... "International Therapeutic Proteins - IgG and F(ab) antitoxin production". itproteins.com. Retrieved 26 September 2022. "About ...
Intrinsically disordered proteins
... therefore includes proteins that contain IDRs as well as fully disordered proteins. The existence and kind of protein disorder ... of eukaryotic proteins, including certain disease-related proteins. Highly dynamic disordered regions of proteins have been ... Flexibility in structured proteins is bound to an equilibrium state, while it is not so in IDPs. Many disordered proteins also ... Disordered proteins have a low content of predicted secondary structure. Due to the disordered nature of these proteins, ...
List of proteins
... proteins Membrane protein Integral membrane protein Peripheral membrane protein Extracellular matrix proteins Blood protein ... Nuclear proteins Cytosolic proteins Cytoskeletal proteins Endoplasmic reticulum resident protein Mitochondrial DNA that encode ... all beta proteins (domains consisting of beta sheets), and mixed alpha helix/beta sheet proteins. While most proteins adopt a ... Proteins may be classified as to their three-dimensional structure (also known a protein fold). The two most widely used ...
Methuselah-like proteins
The Methuselah-like proteins are a family of G protein-coupled receptors found in insects that play a role in aging and ... Methuselah-like proteins are related to G protein-coupled receptors of the secretin receptor family. West AP, Llamas LL, Snow ... v t e (Articles with short description, Short description matches Wikidata, G protein-coupled receptors, Life extension, Aging- ... related proteins, All stub articles, Transmembrane receptor stubs). ...
Calmodulin-binding proteins
... are, as their name implies, proteins which bind calmodulin. Calmodulin can bind to a variety of ... Ca2+/calmodulin-dependent protein kinase II, etc. Proteins, such as neurogranin that plays a vital role in postsynaptic ... Calmodulin-Binding+Proteins at the U.S. National Library of Medicine Medical Subject Headings (MeSH) v t e (Articles with short ... Proteins each have their own unique affinities for calmodulin, that can be manipulated by Ca2+ concentrations to allow for the ...
Proteins in wine
Proteins are present in wine. The most common proteins include thaumatin-like proteins and chitinases and have a role in the ... Some of those proteins are considered nuisance. Some of them are grape pathogenesis-related proteins. Those proteins have been ... Waters, E. J.; Shirley, N. J.; Williams, P. J. (1996). "Nuisance Proteins of Wine Are Grape Pathogenesis-Related Proteins". ... "Thaumatin-like Proteins and Chitinases, the Haze-Forming Proteins of Wine, Accumulate during Ripening of Grape (Vitisvinifera) ...
Angiopoietin-like proteins
Angiopoietin-related protein 1, gene ANGPTL1 Angiopoietin-related protein 2, gene ANGPTL2 Angiopoietin-related protein 3, gene ... The Angiopoietin-like proteins are proteins structurally like the angiopoietins but which do not bind to the angiopoietin ... Angiopoietin-related protein 7, gene ANGPTL7 Angiopoietin-related protein 8, gene ANGPTL8, also known as lipasin because of its ... gene ANGPTL4 Angiopoietin-related protein 5, gene ANGPTL5, mainly expressed in adult human heart. Angiopoietin-related protein ...
Vesiculovirus matrix proteins
Viral structural proteins, Viral protein class, Protein families, Vesiculoviruses). ... The family of vesiculovirus matrix proteins consists of several matrix proteins of the vesicular stomatitis virus, also known ... These proteins play a major role in assembly and budding of VSIV virions. Their main role is to aid virus assembly. They starts ... The matrix (M) protein of the virus causes many of the cytopathic effects of VSV, including an inhibition of host gene ...
Penicillin-binding proteins
Proteins that have evolved from PBPs occur in many higher organisms and include the mammalian LACTB protein. PBPs are all ... Penicillin-binding proteins (PBPs) are a group of proteins that are characterized by their affinity for and binding of ... Presence of the protein penicillin binding protein 2A (PBP2A) is responsible for the antibiotic resistance seen in methicillin- ... Articles with short description, Short description matches Wikidata, Protein pages needing a picture, Bacterial proteins). ...