*  Defective Interfering Particles And Their Role In Disease Progression And Persistence
... are internal deletion mutants of viruses that replicate at the disbursement of the parent virus. This review article aim... ... Defective interfering particles (DIPs) are internal deletion mutants of viruses that replicate at the disbursement of the ... Fungal Genome Sequencing. *Fungal Hyphae. *Fungal Nail Infection. *Fungal Pathogens. *Gallbladder tuberculosis ...
  https://www.omicsonline.org/proceedings/defective-interfering-particles-and-their-role-in-disease-progression-and-persistence-65037.html
*  Replication error deficient and proficient colorectal cancer gene expression differences caused by 3'UTR polyT sequence...
Sequence analysis of the 3'UTRs of a selection of the most differentially expressed genes shows that they all contain deletions ... Analysis of the incidence of mononucleotide repeat sequences in the 3'UTRs, 5'UTRs, and coding sequences of those genes most ... are found in the 3'UTR sequence of most genes. The relevant sequences are typically A/U-rich elements or U repeats. Microarray ... These cancers are typically pseudodiploid, accumulate mutations in repetitive sequences as a result of their mismatch repair ...
  https://www.rdm.ox.ac.uk/publications/179140
*  CDH1 Sequencing and Deletion/Duplication - Quest Diagnostics Nichols Institute of Valencia
Sequencing and deletion/duplication analyses of the CDH1 gene will identify individuals at risk for CHD1-related cancers. ...
  http://www.specialtylabs.com/tests/details.asp?id=92568
*  Sequence Similarity - 1F0F: Cecropin A(1-8)-magainin 2(1-12) gig deletion modification in dodecylphosphocholine...
Structures of protein chains with identical sequences (sequence identity > 95%) are aligned, superimposed and clustered. ... Sequence Similarity Clusters for the Entities in PDB 1F0F Legend Entity #1 , Chains: A CECROPIN A-MAGAININ 2 HYBRID PEPTIDE ... Blast this sequence against all of PDB Archive.. Rank. In each cluster, the chains are sorted (i.e. ranked) according to the ... In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff. ...
  http://www.rcsb.org/pdb/explore/sequenceCluster.do?structureId=1F0F
*  Ultrasensitive Detection of Chimerism by Single-Molecule Molecular Inversion Probe Capture and High-Throughput Sequencing of...
... of Chimerism by Single-Molecule Molecular Inversion Probe Capture and High-Throughput Sequencing of Copy Number Deletion ... of Chimerism by Single-Molecule Molecular Inversion Probe Capture and High-Throughput Sequencing of Copy Number Deletion ... of Chimerism by Single-Molecule Molecular Inversion Probe Capture and High-Throughput Sequencing of Copy Number Deletion ... Methods: We designed a 159-smMIP panel targeting 40 autosomal regions of frequent homozygous deletion across human populations ...
  http://clinchem.aaccjnls.org/content/early/2018/03/16/clinchem.2017.284737
*  Mutation services, Point mutations deletion mutations. 100% sequence guarantee - From Bioneer
Send us your sequence, gene ID or an accession number. Let us know what you need and we will deliver! Bioneer also offers ... purify and sequence your gene of interest. If you like, our free codon optimization will increase protein expression rates and ... In as little as 2 weeks, you can have your gene cloned in hand and 100% sequence guaranteed. And with Bioneer's great pricing ... Automatic DNA sequencer (ABI 3730) 를 이용한 100% sequence guarantee. Applications. Protein 기능 향상. 단백질의 3차구조를 기반으로 특정부위의 아미노산들을 ...
  http://www.bioneer.co.kr/products/GeneSynthesis/Mutagenesis-overview.aspx
*  IKZF1 | Cancer Genetics Web
... in paediatric ALL patients with IKZF1 deletion, by mRNA sequencing. The patient with CSF2RA-CRLF2 also harboured IGH-EPOR. All ... sequence-specific DNA binding - sequence-specific DNA binding transcription factor activity - T cell differentiation - thymus ... conventional sequencing, likely to be replaced soon by ultra-deep sequencing. Mutations in genes other than BCR-ABL1 include ... were pooled to estimate the prognostic power of IKZF1 deletion. Pooled HRs suggested that IKZF1 deletion had a negative impact ...
  http://www.cancerindex.org/geneweb/IKZF1.htm
*  CDH11 | Cancer Genetics Web
Deletion of the VFEEE sequence from the Cad11 cytoplasmic domain (Cad11-cla-Δ5) leads to inhibition of Cad11 internalization ... Using deletion analysis, we identified a unique sequence motif, VFEEE, in the Cad11 membrane proximal region (amino acid ... Deletion analysis showed that the last C-terminal 10 amino acids in Cad11 cytoplasmic domain are required for Amot binding. ... Type II (atypical) cadherins are defined based on their lack of a HAV cell adhesion recognition sequence specific to type I ...
  http://www.cancerindex.org/geneweb/CDH11.htm
*  Helicobacter pylori perturbs iron trafficking in the epithelium to grow on the cell surface.
Sequence Deletion. Signal Transduction. Transcytosis / physiology*. Transferrin / metabolism. Grant Support. ID/Acronym/Agency ... B) CagA and VacA expression is not affected by deletion of vacA and cagA respectively. Lysates of Hp grown on Columbia blood ... An isogenic ΔvacA mutant of strain G27-MA was constructed by deletion of the vacA open reading frame (ORF) beginning from the ... or a rabbit anti-VacA antibody did not show significant differences in CagA or VacA expression resulting from deletion of vacA ...
  http://www.biomedsearch.com/nih/Helicobacter-pylori-Perturbs-Iron-Trafficking/21589900.html
*  SEMA3F | Cancer Genetics Web
A homozygous deletion in this region was detected in two MM primary cell cultures. A heterozygous deletion detected in nine ... In addition, two sequence-tagged site markers (NLJ-003 and NL3-001) located in the Alu-PCR clone 20 region (AP20) and lung ... We focused on 3p21 because this deletion was specific to the epithelioid type. Especially, a deletion in 3p21.1 region carrying ... Frequent deletion of 3p21.1 region carrying semaphorin 3G and aberrant expression of the genes participating in semaphorin ...
  http://www.cancerindex.org/geneweb/SEMA3F.htm
*  Identification of a locus involved in meningococcal lipopolysaccharide biosynthesis by deletion mutagenesis.
A novel method for insertion/deletion mutagenesis in meningococci was devised. This consisted of ligating a digest of total ... Molecular Sequence Data. Neisseria meningitidis / genetics*, metabolism. Sequence Deletion. Transformation, Bacterial. Chemical ... Base Sequence. Carbohydrate Sequence. Cloning, Molecular. DNA Primers. Glycosyltransferases / genetics. Lipopolysaccharides / ... A novel method for insertion/deletion mutagenesis in meningococci was devised. This consisted of ligating a digest of total ...
  http://www.biomedsearch.com/nih/Identification-locus-involved-in-meningococcal/8830268.html
*  Reduction of NADPH-oxidase activity ameliorates the cardiovascular phenotype in a mouse model of Williams-Beuren Syndrome.
Sequence Deletion. Williams Syndrome / genetics*, metabolism, pathology, physiopathology. Chemical. Reg. No./Substance: 0/ ... DD: distal deletion (from Limk1 to Trim50); PD: proximal deletion (from Gtf2i to Limk1); D/P: double heterozygous for DD and PD ... In WBS patients, deletions are almost identical in size and mediated by non allelic homologous recombination, but the deletion ... Primer sequences and PCR conditions for qRT-PCR and genotyping. The locus name, primer sequences, amplicon size, genomic ...
  http://www.biomedsearch.com/nih/Reduction-NADPH-Oxidase-Activity-Ameliorates/22319452.html
*  Assessment of hyperphagia in Prader-Willi syndrome.
Sequence Deletion. Grant Support. ID/Acronym/Agency: P30HD15052/HD/NICHD NIH HHS; R01HD135681/HD/NICHD NIH HHS ...
  http://www.biomedsearch.com/nih/Assessment-hyperphagia-in-Prader-Willi/17636101.html
*  ACVR1 | Cancer Genetics Web
Sequence Deletion. *Ovarian Cancer. *Histones. Tag cloud generated 12 December, 2014 using data from PubMed, MeSH and ... However, deletion of Trp53 alone increased the number of fiber cells that failed to withdraw from the cell cycle. Trp53(CKO) ... Transcriptome sequencing of malignant pleural mesothelioma tumors.. Proc Natl Acad Sci U S A. 2008; 105(9):3521-6 [PubMed] Free ... Deletion of Trp53 rescued the Acvr1(CKO) cell death phenotype in embryos and reduced Acvr1-dependent apoptosis in postnatal ...
  http://www.cancerindex.org/geneweb/ACVR1.htm
*  HLA-DQB1 | Cancer Genetics Web
The genotype of HLA-A, HLA-B, HLA-DR, and HLA-DQ alleles was typed by means of PCR sequence-specific priming.. RESULTS: HLA-B* ... We isolated cfDNA from plasma or serum of donors, treated the cfDNA with bisulfite, PCR-amplified the cfDNA, and sequenced it ... Identification of a novel HLA-DQB1 allele, HLA-DQB1*06:148, by sequence-based typing in a Chinese individual.. Tissue Antigens ... However, existing methods rely on differences in DNA sequences in source tissues, so that cell death cannot be identified in ...
  http://www.cancerindex.org/geneweb/HLA-DQB1.htm
*  getDeletionTolerance.Sequence: Get the deletion tolerance site-process specific parameter... in phylosim: Flexible Simulations...
This method does some error checking and the calls getParameterAtSites(this=this,process=process,id='deletion.tolerance',index= ... Get the deletion tolerance site-process specific parameter for a collection of Site objects aggregated by a Sequence object. ... getAncestral.Sequence: Get the ancestral object of a Sequence object getCodonFreqs.GY94: Get codon frequencies PhyloSim: The ... Get the deletion tolerance site-process specific parameter for a collection of Site objects aggregated by a Sequence object. ...
  https://rdrr.io/cran/phylosim/man/getDeletionTolerance.Sequence.html
*  mediaTUM - Medien- und Publikationsserver
Sequence Deletion; Species Specificity; Ustilago/genetics/physiology «. Autophagy; Caspase 3/genetics/metabolism; Cell Death; ... By contrast, the epidermal cell death response triggered by pep1 deletion mutants was not impaired by BI-1. Hypersensitive- ...
  http://mediatum.ub.tum.de/1379819
*  Wac: a new Augmin subunit required for chromosome alignment but not for acentrosomal microtubule assembly in female meiosis. -...
Molecular Sequence Data; Multiprotein Complexes; RNA Interference; Sequence Deletion. ... We found that a wac deletion mutant is viable but female sterile and shows only a mild impact on somatic mitosis. Unexpectedly ... Amino Acid Sequence; Animals; Carrier Proteins; Cell Proliferation; Cell Survival; Cells, Cultured; Centrosome; Chromosome ...
  http://eprints.whiterose.ac.uk/108199/
*  Is the rate of insertion and deletion mutation male-biased? - Molecular evolutionary analysis of avian and primate sex...
Molecular evolutionary analysis of avian and primate sex chromosome sequence.. Sundström, H., Webster, M.T. & Ellegren, H. ... Is the rate of insertion and deletion mutation male-biased? - ...
  http://uu.diva-portal.org/smash/record.jsf?pid=diva2:76309
*  acute myeloblastic leukaemia without maturation 2005:2010[pubdate] *count=100 - BioMedLib™ search engine
MeSH-major] Gene Deletion. Leukemia, Myeloid, Acute / genetics. Oligonucleotide Array Sequence Analysis / methods. fms-Like ... Lu G, Yin CC, Medeiros LJ, Abruzzo LV: Deletion 15q as the sole abnormality in acute myeloid leukemia: report of three cases ... Title] Deletion 15q as the sole abnormality in acute myeloid leukemia: report of three cases and review of the literature. ... Deletions within the long arm of chromosome 15, a recurrent abnormality in myeloid malignancies, have been reported previously ...
  http://www.bmlsearch.com/?kwr=acute+myeloblastic+leukaemia+without+maturation+2005:2010%5Bpubdate%5D&cxts=100&stmp=b0
*  Complex Mutations & Subpopulations of Deletions at Exon 19 of EGFR in NSCLC Revealed by Next Generation Sequencing: Potential...
Comparison of data obtained by Sanger Sequencing and Next Generation Sequencing analysis on cases carrying complex deletions. ... Among the 28 deletions of 18 bp in this series, 17 (61%) were double deletions, whereas only 2 (3%) of 74 deletions of 15 bp ... All the samples with deletions at SS were found to be positive for exon 19 deletions with NGS. No deletions were observed in ... were subjected to deep next generation sequencing (NGS). All samples with deletions at SS showed deletions with NGS. No ...
  http://pubmedcentralcanada.ca/pmcc/articles/PMC3407088/?lang=en-ca
*  Medical Genetics Test Details - Baylor Genetics Laboratories - Baylor College of Medicine, Houston, Texas
Deletion/Duplication Analysis. MCEE Deletion/Duplication Analysis. Test Code: 3398 Sequence & Deletion/Duplication Analysis. ... MCEE Comprehensive - Sequence & Deletion/Duplication Analysis. Test Code: 3399 Sequence Analysis. MCEE Sequence Analysis. Test ... MCEE Sequence Analysis. Test Code: 3396. This test can only be performed if there is a previously identified familial mutation. ... MCEE Sequence Analysis. Test Code: 3397. We require that the referring center consult with our laboratory genetic counselors ...
  https://www.bcm.edu/research/medical-genetics-labs/test_detail.cfm?testcode=3395&show=1
*  Medical Genetics Test Details - Baylor Genetics Laboratories - Baylor College of Medicine, Houston, Texas
Deletion/Duplication Analysis. YARS2 Deletion/Duplication Analysis. Test Code: 3958 Sequence & Deletion/Duplication Analysis. ... YARS2 Comprehensive - Sequence & Deletion/Duplication Analysis. Test Code: 3959 Sequence Analysis. YARS2 Sequence Analysis. ... YARS2 Comprehensive - Sequence & Deletion/Duplication Analysis Test Information:. Confirmation of Clinical Diagnosis, Carrier ... Sequence analysis is performed in both forward and reverse directions and deletion/duplication analysis performed using a ...
  https://www.bcm.edu/research/medical-genetics-labs/test_detail.cfm?testcode=3959&show=1
*  Medical Genetics Test Details - Baylor Genetics Laboratories - Baylor College of Medicine, Houston, Texas
Deletion/Duplication Analysis. ATP5E Deletion/Duplication Analysis. Test Code: 3293 Sequence & Deletion/Duplication Analysis. ... ATP5E Comprehensive - Sequence & Deletion/Duplication Analysis. Test Code: 3294 Sequence Analysis. ATP5E Sequence Analysis. ... Sequencing of the region(s) containing the familial alteration(s). Special Notes:. We require that the referring center consult ... ATP5E Sequence Analysis. Test Code: 3291. This test can only be performed if there is a previously identified familial mutation ...
  https://www.bcm.edu/research/medical-genetics-labs/test_detail.cfm?testcode=3292&show=1