*  Mehrschichtige Folien aus Seidenprotein - Dokument EP1852470
... could correlate assembly properties and stabilities of assembled structures directly with the amino acid sequences of the silk ... is where the authentic nucleic acid sequence is modified in order to adapt said sequence to the expression in a host without ... The authentic sequences are preferably derived from the amino terminal non-repetitive region (flagelliform proteins) and/or the ... It is primarily composed of the amino acids glycine, valine, alanine and proline. Elastin is made by linking many soluble ...
  http://patent-de.com/20071220/EP1852470.html
*  Patent US20130136779 - Method of producing nano- and microcapsules of spider silk protein - Google Patents
... and microcapsules from spider silk proteins The invention is further directed to nano- or microcapsules obtainable by this ... nucleic acids encoding one or more amino acids in a spider silk protein by a lysine or cysteine encoding nucleic acid sequence ... the synthetic repetitive sequence is derived from ADF-3 and comprises one or more repeats of the amino acid sequence of SEQ ID ... the formed microcapsule-like structures continued to fluoresce indicating that the protein shell of these structures did not ...
  http://www.google.ca/patents/US20130136779
*  Localization of the bioadhesive precursors of the sandcastle worm, Phragmatopoma californica (Fewkes) | Journal of Experimental...
... low complexity sequences and highly repetitive primary structures - were identified by sequencing random clones from a ... The authors also noted the similarities in amino acid composition to the underwater adhesive silk of caddisfly larvae ( ... Taking into account serine phosphorylation, nearly 50% of the amino acids in the sandcastle worm glue are charged. The first ... was used to create specific nucleic acid and antibody probes to better understand the molecular organization of the sandcastle ...
  http://jeb.biologists.org/content/215/2/351
*  JoVE | Peer Reviewed Scientific Video Journal - Methods and Protocols
On-chip Isotachophoresis for Separation of Ions and Purification of Nucleic Acids ... If the sample (especially biomaterials, such as human head hair, spider silk, and silkworm silk) is not conductive, it will be ... species to visualize the separation and perform quantitation of amino acids. ... The pH buffer (typically a 50 mM sodium acetate or 50 mM Tris buffer), is chosen for the buffer's particular acid dissociation ...
  https://www.jove.com/visualize/abstract/23935886/a-preliminary-study-of-the-heating-effect-of-the-tibetan-plateau
*  JoVE | Peer Reviewed Scientific Video Journal - Methods and Protocols
The PDZ motif within CFTR that is recognized by PDZ scaffold proteins is the last four amino acids at the C terminus (i.e., ... Here, a bispecific purification tag with two different binding sites on a 46 amino acid, small protein domain has been ... Fortunately, the oligosaccharide structures, which are critical for binding with GM-CSF, are more similar to the structures of ... The recombinant sGMRα was contained in the hydrophilic sericin layers of silk threads without being fused to the silk proteins ...
  https://www.jove.com/visualize/abstract/24594699/soluble-prokaryotic-overexpression-purification-bioactive-human
*  JoVE | Peer Reviewed Scientific Video Journal - Methods and Protocols
The aim of de novo protein design is to find the amino acid sequences that will fold into a desired 3-dimensional structure ... Solid-state nanopores have emerged as a versatile tool for the characterization of single biomolecules such as nucleic acids ... A rank-ordered list of the sequences for each step of the process, along with relevant designed structures, provides the user ... Designing Silk-silk Protein Alloy Materials for Biomedical Applications. Authors: Xiao Hu, Solomon Duki, Joseph Forys, Jeffrey ...
  https://www.jove.com/visualize/abstract/20711447/coulomb-interactions-between-cytoplasmic-electric-fields
*  Gene and genon concept: coding versus regulation
... between the chemical compositions of amino acids and polypeptides on one hand and triplets or nucleic acid sequences on the ... and from which the non-repetitive sequence length, in terms of (known) RNA-sequence, might be calculated. However, such data ... These are assembled by interaction with other proteins or cellular structures as, for instance, at the level of the nuclear ... which actively express many genes and predominantly those at the basis of silk secretion. By order of magnitude, in Drosophila ...
  http://pubmedcentralcanada.ca/pmcc/articles/PMC2242853/?lang=en-ca
*  Method for recombinant microorganism expression and isolation of collagen-like polypeptides - Patent application
... use a nucleic acid sequence encoding an amino acid sequence free of the sequence MGPR (SEQ ID NO:14) even though it is present ... The spacers are 33 amino acids and 25 amino acids in length. Thus the repetitive GPP portion of the polymer which is 24 amino ... specifically repeating groups such as silk are disclosed. Collagen is suggested as one of the structures capable of providing a ... nucleic acid sequences. Thus the mutations should always result in an amino acid sequence with more than 4 different amino ...
  http://www.patentsencyclopedia.com/app/20090264625
*  Protocols and Video Articles Authored by Ming Chen
... causing a change in the amino acid sequence (Gly104â†'Arg). This amino acid alteration is predicted to disrupt a highly ... PmiRKB: a Plant MicroRNA Knowledge Base Nucleic Acids Research. Jan, 2011 , Pubmed ID: 20719744 MicroRNAs (miRNAs), one type of ... monodon genome were obtained for repetitive and protein-coding sequence analyses. ... We found that the five genes of silk proteins secreted from PSG including fibroin heavy (H) and light (L) chains, P25, seroin 1 ...
  https://www.jove.com/author/Ming_Chen
*  Patent US6620917 - Method for the purification and aqueous fiber spinning of spider silks and ... - Google Patents
Bacterial proteins are hydrolyzed while the silk protein remains intact. Silk proteins remain soluble as they are concentrated ... Specifically, the lysis of bacteria and purification of silk proteins occur in a single solution of organic acid. ... 3 presents the nucleic acid sequence of a recombinant silk protein (SEQ ID NO: 3) designated pQE[(SP1)4/(SP2)1]4. ... The resulting 30 amino acids of N-terminal sequence led to the identification of E. coli outer membrane protein, ompF. This ...
  http://www.google.com/patents/US6620917?dq=5,960,411
*  Biomolecule - Wikipedia
They are also known as fatty acids Amino acids contain both amino and carboxylic acid functional groups. (In biochemistry, the ... The particular series of amino acids that form a protein is known as that protein's primary structure. This sequence is ... Biomolecules include large macromolecules (or polyanions) such as proteins, carbohydrates, lipids, and nucleic acids, as well ... These complex structures are facilitated by the fact that RNA backbone has less local flexibility than DNA but a large set of ...
  https://en.wikipedia.org/wiki/Biomolecule
*  APPENDIX C: CHRONOLOGY | Kickoff
R. M. Schwartz and M. O. Dayhoff compare sequence data for a variety of proteins and nucleic acids from an evolutionarily ... of the proteins that have been studied in humans and chimpanzees have identical amino acid sequences. They conclude that the ... S. Perdix-Gillot reports giant nuclei that are over 1 million-ploid in the cells of the silk gland of Bombyx mori. B. G. ... A. Klug receives the Nobel Prize for his contributions to the analysis of crystal- line structures of biological importance, ...
  http://fx.damasgate.com/appendix-c-chronology-6/
*  Patent US6558944 - High throughput screening assay systems in microscale fluidic devices - Google Patents
... complementary nucleic acids, nucleic acid associating proteins and their nucleic acid ligands. A large number of specifically ... polyaminemethylvinylether maleic acid copolymer, amino acid copolymer, ethylene-maleic acid copolymer, nylon, silk, etc., ... Apparatus and methods for sequencing nucleic acids in microfluidic systems. US5959291. Jun 25, 1998. Sep 28, 1999. Caliper ... Examples of microfluidic structures are described in, e.g., U.S. Pat. Nos. 5,271,724, 5,277,556, 5,171,132, and 5,375,979. See ...
  http://www.google.com/patents/US6558944?dq=5,742,768
*  Patent US20040110439 - Native protein mimetic fibers, fiber networks and fabrics for medical use - Google Patents
This elastin mimetic protein contains 39 repeats ofthe amino acid sequence (Val-Pro-Gly-Val-Gly)4(Val-Pro-Gly-Lys-Gly) (SEQ ID ... I and II, IRL Press, Oxford, UK; Hames and Higgins (eds.) (1985) Nucleic Acid Hybridization, IRL Press, Oxford, UK; and Setlow ... Characteristically, it is composed of two α1(I) chains and one α2(I) chain, each slightly more than 1000 amino acids long, that ... have electrospun a series of silk-like protein polymers from formic acid and investigated their capacity to modify the cell ...
  http://www.google.co.uk/patents/US20040110439
*  Errors of National Science Academy | Abiogenesis | Natural Selection
Similar family histories have been obtained from the three-dimensional structures and amino acid sequences of other proteins, ... in question are simple organic compounds such as amino-acids or nucleic acids, and it is impossible for these to turn into such ... M. E. Fotaki and K. Iatrou, 1993, Silk moth chorion pseudogenes: hallmarks of genomic evolution by sequence duplication and ... M. Hamada, A newly isolated family of short interspersed repetitive elements . (SINEs) in Coregonid fishes, Genetics 146:363- ...
  https://www.scribd.com/document/5889234/Errors-of-National-Science-Academy
*  JoVE | Peer Reviewed Scientific Video Journal - Methods and Protocols
The aim of de novo protein design is to find the amino acid sequences that will fold into a desired 3-dimensional structure ... The viral concentrate is used for the extraction of viral nucleic acids and the specific adenoviruses and polyomaviruses of ... A rank-ordered list of the sequences for each step of the process, along with relevant designed structures, provides the user ... Designing Silk-silk Protein Alloy Materials for Biomedical Applications. Authors: Xiao Hu, Solomon Duki, Joseph Forys, Jeffrey ...
  https://www.jove.com/visualize/abstract/21640569/mylodon-darwinii-dna-sequences-from-ancient-fecal-hair-shafts
*  Question Bank for High School Science/Biology/CBSEPMT2007 - Wikibooks, open books for an open world
A person who is on a long hunger strike and is surviving only on water, will have (a) less amino acids in his urine (b) more ... Telomere repetitive DNA sequences control the function of eukaryotic chromosomes because they (a) are RNA transcription ... nucleic acids (d) ATP in small stepwise units.. 74. Adaptive radiation refers to (a) evolution of different species from a ... Which one of the following pairs is mismatched? (a) Apis indica - honey (b) Kenia lacca - lac (c) Bombyx mori - silk (d) Pi la ...
  https://en.wikibooks.org/wiki/Question_Bank_for_High_School_Science/Biology/CBSEPMT2007
*  De novo characterization of the gene-rich transcriptomes of two color-polymorphic spiders, Theridion grallator and T....
... an updated online resource for spider toxin sequences and structures. Nucleic Acids Res. 2011, 39 (Database issue): D653-D657. ... model using the WAG amino-acid-substitution matrix [89]. To find the most likely tree topology, 1000 random addition sequence ( ... Fragmentation is likely to be common for highly-repetitive silk genes, for example and we have demonstrated that short contigs ... Sequences less than 100 amino acids in length were removed, and any alignments with missing taxa were deleted. The 352 trimmed ...
  https://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-14-862
*  Protocols and Video Articles Authored by Andrea Lim
The C-terminus of DicA shows significant amino acid sequence similarity to the DNA-binding domains of RovA and SlyA, regulators ... nucleic acids and glycogen groups etc. The differences in terms of classification accuracy and interpretability of resulting ... Our approach can be used as a simple protocol for evaluating the grain boundaries of other two-dimensional layered structures, ... Using RNA interference, knockdowns of CIWI and CILI resulted in the increased expression of Chicken Repetitive 1 (CR1) Elements ...
  https://www.jove.com/author/Andrea_Lim
*  Tol1 FACTOR TRANSPOSASE AND DNA INTRODUCTION SYSTEM USING THE SAME - Patent application
As a deduced amino acid sequence encoded by the ORF, the amino acid sequence of SEQ ID NO: 2 (851 amino acids) was obtained. ... Nucleic Acids Res 31: 6873-6881 [0260]15. O'Hare K., Rubin G. M. (1983) Structures of P transposable elements and their sites ... rearrangement within the Antheraea pernyi silk fibroin gene is associated with four types of repetitive units. J. Mol. Evol. 51 ... the amino acid sequence of SEQ ID No: 1 or (b) a protein having an amino acid sequence homologous to the amino acid sequence of ...
  http://www.patentsencyclopedia.com/app/20100129914
*  JoVE | Peer Reviewed Scientific Video Journal - Methods and Protocols
... acid is subjected to density gradient ultracentrifugation and subsequent gradient fractionation to separate nucleic acids of ... Fibrous proteins display different sequences and structures that have been used for various applications in biomedical fields ... This allows for selective addition of methacrylamide groups to the N-termini of the peptides while amino acids with reactive ... Designing Silk-silk Protein Alloy Materials for Biomedical Applications. Authors: Xiao Hu, Solomon Duki, Joseph Forys, Jeffrey ...
  https://www.jove.com/visualize/abstract/25197799/probing-cellular-mechanoadaptation-using-cell-substrate-de-adhesion
*  Annelise E. Barron | Stanford Medicine Profiles
Positively charged arginines were deliberately introduced at regular intervals into the amino acid sequence to increase the ... repetitive secondary structures. It is now possible to investigate sequence-structure relationships and the driving forces for ... This subtle but "unfortunate" property of highly charged polyelectrolytes makes it impossible to separate nucleic acids by free ... A tunable silk-alginate hydrogel scaffold for stem cell culture and transplantation. Biomaterials Ziv, K., Nuhn, H., Ben-Haim, ...
  https://med.stanford.edu/profiles/annelise-barron
*  PLANTS AND SEEDS OF CORN VARIETY CV431223 - Patent application
Simple Sequence Length Polymorphisms (SSLPs) (Williams et al., Nucleic Acids Res., 18:6531-6535, 1990), Randomly Amplified ... acid metabolism, abiotic stress resistance, altered seed amino acid composition, site-specific genetic recombination, and ... 0048] Ear-Silk Color: The color of the silk observed 2 to 3 days after silk emergence scored as green-yellow, yellow, pink, red ... The PCR® detection is done by use of two oligonucleotide primers flanking the polymorphic segment of repetitive DNA. Repeated ...
  http://www.patentsencyclopedia.com/app/20120272383
*  Do Alu repeats drive the evolution of the primate transcriptome? | Genome Biology | Full Text
Kimura RH, Choudary PV, Schmid CW: Silk worm Bm1 SINE RNA increases following cellular insults. Nucleic Acids Res. 1999, 27: ... and other distributional features of repetitive sequences in the human genome estimated from 430 megabases of genomic sequence ... Vansant G, Reynolds WF: The consensus sequence of a major Alu subfamily contains a functional retinoic acid response element. ... Lercher MJ, Urrutia AO, Pavlicek A, Hurst LD: A unification of mosaic structures in the human genome. Hum Mol Genet. 2003, 12: ...
  https://genomebiology.biomedcentral.com/articles/10.1186/gb-2008-9-2-r25
*  Compositions and methods for therapeutic delivery with frozen particles - Patent application
... nucleic acid, amino acid, peptide, protein, glycopeptide, proteoglycan, glycoprotein, glycolipid, sphingolipid, ... alpha-linolenic acid, omega-3 fatty acids, yeast, bacteria, algae, other microorganisms, plant products, or animal products. In ... silk, rayon, acetate, modacrylic, olefin, acrylic, polyester, aromatic polyester, poly-lactic acid, vinyon, saran, spandex, ... partial or whole genetic sequence; partial or whole proteomic sequence; medical history; or blood condition. [0060]In the at ...
  http://www.patentsencyclopedia.com/app/20100111843