*  The Institute for Creation Research
These alleged ancient viral sequences are thought to have entered the genome via viral infection, initially served no purpose ... over the past 100 million years of mammalian evolution-with their viral-like DNA proliferating across creatures' genomes.1 ... the great ongoing myths of evolution is that the genomes of animals and humans are littered with vast amounts of genomic viral ... So, where do viruses come from that essentially share the same sequences as those found in their host genomes? Perhaps the ...
  http://www.icr.org/article/8661
*  Bioinformatics Tools: Reconstruction of bacterial and viral genomes from multiple metagenomes
A total 1156 bacterial genomes belonging to 219 bacterial families and, 279 viral genomes belonging to 84 viral families could ... More than 80% complete draft genome sequences could be reconstructed for a total of 126 bacterial and 11 viral genomes. ... unix Upper case urea url Velvet Venn diagram venny VER viral genome web resources on tuberculosis weight WGS whole genome ... purification Q-SiteFinder QIIME Ray RDP classifier reads reconstruction of bactieral genome reconstruction of viral genome ...
  http://bioinformatictools.blogspot.com/2016/05/reconstruction-of-bacterial-and-viral.html
*  Frontiers | Kaposi's Sarcoma-Associated Herpesvirus Genome Replication, Partitioning, and Maintenance in Latency | Microbiology
Among the latently expressing viral factors, LANA seems to play pivotal roles in viral genome replication, partitioning, and ... Among the latently expressing viral factors, LANA seems to play pivotal roles in viral genome replication, partitioning, and ... The viral genome replicates according to the host cell cycle by recruiting the host cellular replication machinery. ... On the other hand, there are few reports about the partitioning and maintenance of the viral genome. It has been reported that ...
  https://www.frontiersin.org/articles/10.3389/fmicb.2012.00007/full
*  UBP1 Gene - GeneCards | UBIP1 Protein | UBIP1 Antibody
viral genome replication. TAS. 8114710. Genes that share ontologies with UBP1: view ...
  http://www.genecards.org/cgi-bin/carddisp.pl?gene=UBP1
*  Frontiers | Kaposi's Sarcoma Herpesvirus Genome Persistence | Microbiology
In order to persist in proliferating tumor cells, the viral genome replicates once per cell cycle and then segregates to ... LANA serves as a molecular tether, bridging the viral genome to mitotic chromosomes to ensure that KSHV DNA reaches progeny ... In order to persist in proliferating tumor cells, the viral genome replicates once per cell cycle and then segregates to ... LANA serves as a molecular tether, bridging the viral genome to mitotic chromosomes to ensure that KSHV DNA reaches progeny ...
  https://www.frontiersin.org/articles/10.3389/fmicb.2016.01149/full
*  Phosphoprotein - Measles morbillivirus
br>,/br>These range from a single component such as Viral genomes to several components as in the case of eukaryotic ... They may also represent different stages in a genome project and include components such as contigs, scaffolds or Whole Genome ... of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.,p>,a href='/help/ ... Shotgun (WGS) master records.,p>,a href='/help/proteome_component' target='_top'>More...,/a>,/p> Componenti: Genome ...
  http://www.uniprot.org/uniprot/Q83623
*  Robust HPV-18 production in organotypic cultures of primary human keratinocytes. - NextBio article
DNA, Viral Genome, Viral Human papillomavirus 18 Humans Keratinocytes Mice Plasmids Real-Time Polymerase Chain Reaction ...
  http://www.nextbio.com/b/search/article.nb?id=25348300
*  August 24th, 2011 - Volume 25 - Issue 13 : AIDS
Virus-inhibitory peptide: a natural HIV entry inhibitor in search for a formal target in the viral genome. QuiƱones-Mateu, ... Development and validation of systems for rational use of viral load testing in adults receiving first-line ART in sub-Saharan ...
  http://journals.lww.com/aidsonline/toc/2011/08240
*  Discovery of endogenous viruses | Philosophical Transactions of the Royal Society B: Biological Sciences
With complete host genomes available for analysis, we can now see the great extent of viral invasion into the genomes of ... the full replication cycle occurs via non-integrated circular viral genomes, whereas viral integration into host DNA usually ... 2012 An endogenous foamy-like viral element in the Coelacanth genome. PLoS Pathog. 8, e1002790. (doi:10.1371/journal.ppat. ... Nowadays, the notion that viral genetic sequences are present in host genomes is commonplace [1,2]. Conversely, many host genes ...
  http://rstb.royalsocietypublishing.org/content/368/1626/20120494
*  CTBP2 (human)
... viral genome replication; white fat cell differentiation ...
  https://www.phosphosite.org/proteinAction.action?id=8921
*  Transcriptome Sequencing (RNA-Seq) | SpringerLink
Single-molecule DNA sequencing of a viral genome. Science. 2008;320:106-9.PubMedGoogle Scholar ... The pediatric cancer genome project. Nat Genet. 2012;44(6):619-22.PubMedPubMedCentralGoogle Scholar ... Accurate whole human genome sequencing using reversible terminator chemistry. Nature. 2008;456:53-9.PubMedPubMedCentralGoogle ... What are we learning from the cancer genome? Nat Rev Clin Oncol. 2012;9(11):621-30 (Review on NGS in cancer).PubMedGoogle ...
  https://link.springer.com/chapter/10.1007/978-1-4939-0727-4_3
*  Plant virus - Wikipedia
Some viral families, such as the Bromoviridae instead opt to have multipartite genomes, genomes split between multiple viral ... In the presence of the viral genome, the discs are stacked, then a tube is created with room for the nucleic acid genome in the ... The structure of a virus is given by its coat of proteins, which surround the viral genome. Assembly of viral particles takes ... The resulting capped leader RNA is used to prime transcription on the viral genome. However some plant viruses do not use cap, ...
  https://en.wikipedia.org/wiki/Plant_virus
*  Ppia - Peptidyl-prolyl cis-trans isomerase A - Mus musculus (Mouse) - Ppia gene & protein
br>,/br>These range from a single component such as Viral genomes to several components as in the case of eukaryotic ... Genome annotation databases. Ensembl eukaryotic genome annotation project. More...Ensembli. ENSMUST00000132846; ... Genome annotation databases. Ensembl eukaryotic genome annotation project. More...Ensembli. ENSMUST00000132846; ... They may also represent different stages in a genome project and include components such as contigs, scaffolds or Whole Genome ...
  http://www.uniprot.org/uniprot/P17742
*  APOBEC3C Gene - GeneCards | ABC3C Protein | ABC3C Antibody
viral process. IEA. --. GO:0045071. negative regulation of viral genome replication. IDA. 21632763. ... The resultant detrimental levels of mutations in the proviral genome, along with a deamination-independent mechanism that works ... The resultant detrimental levels of mutations in the proviral genome, along with a deamination-independent mechanism that works ... it can induce the conversion of cytosine to uracil in the minus-sense single-strand viral DNA, leading to G-to-A hypermutations ...
  http://www.genecards.org/cgi-bin/carddisp.pl?id_type=entrezgene&id=27350
*  BIO 114
Viral Genome and Bioinformatics (0, 4). 2 credits.. A computer-based laboratory experience, designed for students completing ... Students will learn to identify genes in a viral genome, compare the predicted proteins with known proteins in databases, ... Viral Discovery (0, 4). 2 credits.. An exploratory laboratory experience, designed for incoming freshmen. Students will learn ... An advanced biology course designed for students to learn about the structure and function of genomes, to develop facility in ...
  http://www.jmu.edu/catalog/15/courses/BIO.shtml
*  ILF3 Gene - GeneCards | ILF3 Protein | ILF3 Antibody
Human Genome Epidemiology Navigator (HuGE) ATLAS of Genetics and Cytogenetics in Oncology and Haematology ... Upon viral infection, ILF3 accumulates in the cytoplasm and participates in the innate antiviral response (PubMed:21123651). ... Upon viral infection, ILF3 accumulates in the cytoplasm and participates in the innate antiviral response (PubMed:21123651). ... In turn, unbound ILF3 molecules are able to interact with and thus inhibit viral mRNAs (PubMed:21123651, PubMed:28625552). * ...
  http://www.genecards.org/cgi-bin/carddisp.pl?gene=ILF3
*  Tissue expression of CXCR6 - Summary - The Human Protein Atlas
GO:0019079 [viral genome replication]. GO:0019958 [C-X-C chemokine binding]. GO:0070098 [chemokine-mediated signaling pathway] ...
  http://www.proteinatlas.org/ENSG00000172215-CXCR6/tissue/vulva%252Fanal+skin
*  Expression of VCP in cancer - Summary - The Human Protein Atlas
GO:0019079 [viral genome replication]. GO:0019903 [protein phosphatase binding]. GO:0019904 [protein domain specific binding]. ... generated by the The Cancer Genome Atlas (TCGA). RNA cancer tissue category is calculated based on mRNA expression levels ... RNA category is calculated separately for The Cancer Genome Atlas (TCGA) data from cancer tissues and internally generated ... RNA expression overview shows RNA-seq data from The Cancer Genome Atlas (TCGA). ...
  http://www.proteinatlas.org/ENSG00000165280-VCP/pathology
*  Ellen F Foxman, MD, PhD > Laboratory Medicine | Yale School of...
... during viral genome replication. Cells are also stained with Mitotracker red to reveal the location of mitochondria, the ...
  https://medicine.yale.edu/labmed/sections/virology/ellen_foxman.profile
*  The Detection of Drug-Resistant HIV-1 in Taiwan - Full Text View - ClinicalTrials.gov
Two strategies will be used to amplify viral genome. The first one will be amplification of a nearly full-length viral genome. ... If this strategy does not work, the second strategy will be to amplify two fragments of viral genome and to assemble these two ... The plasma viral RNA is more representative of the replicating virus pool at any time point than the cell-associated proviral ... In order to study the relationship of the complete HIV-1 genome to phenotypic resistance, we choose to focus on plasma virions ...
  https://clinicaltrials.gov/show/NCT00690001?order=247
*  "Calling Cards" for DNA-Binding Proteins in Mammalian Cells |...
2008 Single-molecule DNA sequencing of a viral genome. Science 320: 106-109. ... Before using our method to record the visits of DNA-binding proteins to the genome, we sought to determine the genome-wide ... 2009 Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 10: R25. ... 2002 The human genome browser at UCSC. Genome Res. 12: 996-1006. ... G3: Genes , Genomes , Genetics. *Genes to Genomes: The GSA Blog ...
  http://www.genetics.org/content/190/3/941
*  Julie Parsonnet | Stanford Medicine Profiles
Phylogenetic analysis of the nearly complete viral genome (7961 bp) revealed that this virus belongs to the Theiler's murine ... of a novel picornavirus genome. The complete genome was subsequently cloned and found to share 52.3% nucleotide pairwise ... The complete genome of klassevirus - a novel picornavirus in pediatric stool VIROLOGY JOURNAL Greninger, A. L., Runckel, C., ... No bacterial, mycobacterial, viral, or parasitic agents known to be enteropathogenic were detected in stools or implicated ...
  https://med.stanford.edu/profiles/julie-parsonnet
*  CCL5 - C-C motif chemokine - Sus scrofa (Pig) - CCL5 gene & protein
br>,/br>These range from a single component such as Viral genomes to several components as in the case of eukaryotic ... Genome annotation databases. Ensembl eukaryotic genome annotation project. More...Ensembli. ENSSSCT00000033821; ... Genome annotation databases. Ensembl eukaryotic genome annotation project. More...Ensembli. ENSSSCT00000033821; ... They may also represent different stages in a genome project and include components such as contigs, scaffolds or Whole Genome ...
  http://www.uniprot.org/uniprot/Q2EN89
*  Nr5a2 - Nuclear receptor subfamily 5 group A member 2 - Rattus norvegicus (Rat) - Nr5a2 gene & protein
positive regulation of viral genome replication Source: RGDInferred from sequence orthologyi*19264593 ... br>,/br>These range from a single component such as Viral genomes to several components as in the case of eukaryotic ... Genome annotation databases. Ensembl eukaryotic genome annotation project. More...Ensembli. ENSRNOT00000000812; ... Genome annotation databases. Ensembl eukaryotic genome annotation project. More...Ensembli. ENSRNOT00000000812; ...
  http://www.uniprot.org/uniprot/Q9QWM1