*  Protein consensus sequence motifs | SpringerLink
The large number of protein consensus sequences that may be recognized without computer analysis are reviewed. These include ... and consensus sequences that may be carried out on the internet.. Index Entries. Protein consensus sequences motifs protein- ... The large number of protein consensus sequences that may be recognized without computer analysis are reviewed. These include ... Aitken, A. (1995) Protein chemistry methods, posttranslational modification, consensus sequences, in Proteins Labfax (Price, N ...
  https://link.springer.com/article/10.1385%2FMB%3A12%3A3%3A241
*  Consensus sequence - Biology-Online Dictionary
Consensus sequence Of a series of related dna, rna or protein sequences, the sequence that reflects the most common choice of ... The generation of consensus sequences has been subjected to intensive mathematical analysis. ... Retrieved from "https://www.biology-online.org/dictionary/index.php?title=Consensus_sequence&oldid=10105" ...
  https://www.biology-online.org/dictionary/Consensus_sequence
*  Consensus sequence - Wikipedia
... can also be considered as consensus sequences. Thus a consensus sequence is a model for a putative DNA binding site: it is ... The conserved sequence motifs are called consensus sequences and they show which residues are conserved and which residues are ... Any mutation allowing a mutated nucleotide in the core promoter sequence to look more like the consensus sequence is known as ... A protein binding site, represented by a consensus sequence, may be a short sequence of nucleotides which is found several ...
  https://en.wikipedia.org/wiki/Consensus_sequence
*  Kozak consensus sequence - Wikipedia
The Kozak consensus sequence, Kozak consensus or Kozak sequence is a sequence which occurs on eukaryotic mRNA and has the ... The Kozak consensus sequence plays a major role in the initiation of the translation process. The sequence was named after the ... consensus, the nucleotides at positions +4 (i.e. G in the consensus) and -3 (i.e. either A or G in the consensus) relative to ... Lmx1b is an example of a gene with a weak Kozak consensus sequence. For initiation of translation from such a site, other ...
  https://en.wikipedia.org/wiki/Kozak_consensus_sequence
*  Consensus sequence | Article about consensus sequence by The Free Dictionary
An average nucleotide sequence; each nucleotide is the most frequent at its position in the sequence Explanation of consensus ... Looking for consensus sequence? Find out information about consensus sequence. ... consensus sequence. Also found in: Dictionary, Thesaurus, Medical, Legal, Wikipedia. consensus sequence. [kən′sen·səs ‚sē·kwəns ... Then comparisons were made between the consensus sequence and the entries in the MicroSeq database.. DNA sequencing by Microseq ...
  http://encyclopedia2.thefreedictionary.com/consensus+sequence
*  A highly conserved G-rich consensus sequence in hepatitis C virus core gene represents a new anti-hepatitis C target | Science...
A highly conserved G-rich consensus sequence in hepatitis C virus core gene represents a new anti-hepatitis C target ... A highly conserved G-rich consensus sequence in hepatitis C virus core gene represents a new anti-hepatitis C target ... A highly conserved G-rich consensus sequence in hepatitis C virus core gene represents a new anti-hepatitis C target ... A highly conserved G-rich consensus sequence in hepatitis C virus core gene represents a new anti-hepatitis C target ...
  http://advances.sciencemag.org/content/2/4/e1501535
*  Whole-genome consensus sequence analysis of a South African rotavirus SA11 sample reveals a mixed infection with two close...
"Whole-genome consensus sequence analysis of a South African rotavirus SA11 sample reveals a mixed infection with two close ... Determination of the whole-genome consensus sequence of the prototype DS-1 rotavirus using sequence-independent genome ... Whole-genome consensus sequence analysis of a South African rotavirus SA11 sample reveals a mixed... Mlera, Luwanika; O'Neill, ... Whole-genome consensus sequence analysis of a South African rotavirus SA11 sample reveals a mixed infection with two close ...
  https://www.deepdyve.com/lp/springer_journal/whole-genome-consensus-sequence-analysis-of-a-south-african-rotavirus-l2Ykhqwm3c
*  Microsatellite detection and consensus sequence verification by virtual PCR and machine learning
... ... Microsatellites, or simple sequence repeats, are genetic loci where several nucleotide bases are repeated in tandem. Since they ... or a shotgun-sequencing database without the overhead required to perform PCR chemically with human intervention. Moreover, a ... a program that detects and then verifies microsatellites by modeling PCR digitally from an Expressed Sequence Tag (EST) ...
  https://athenaeum.libs.uga.edu/handle/10724/21091
*  Secondary structure prediction and consensus sequence o | Open-i
Secondary structure prediction and consensus sequence of PelD and PleD. A. Secondary structure predication was made using the ... B. Consensus sequence of PelD and PleD was based on Phyre alignment of 20 and 100 homologues respectively. Residues required ... B. Consensus sequence of PelD and PleD was based on Phyre alignment of 20 and 100 homologues respectively. Residues required ... fig05: Secondary structure prediction and consensus sequence of PelD and PleD. A. Secondary structure predication was made ...
  https://openi.nlm.nih.gov/detailedresult.php?img=PMC2170427_mmi0065-1474-f5&req=4
*  Vol 15: The utility of PacBio circular consensus sequencing for characterizing complex gene families in non-model organisms. -...
Vol 15: The utility of PacBio circular consensus sequencing for characterizing complex gene families in non-model organisms ... Descargar gratis o leer online en formato PDF el libro: Vol 15: The utility of PacBio circular consensus sequencing for ... Here we investigate the utility of Pacific Biosciences single molecule real-time SMRT circular consensus sequencing CCS as an ... Results: We generated 34,088 high quality circular consensus sequences of two diverse V1R subfamilies here referred to as V1RI ...
  http://libros.duhnnae.com/2017/jun3/149691418984-Vol-15-The-utility-of-PacBio-circular-consensus-sequencing-for-characterizing-complex-gene-families-in-non-model-organisms-Larsen-Peter-A-Heilma.php
*  DNA, Chromosomes and the Genomes
Consensus Sequence in DNA Attached is a file I need to use to answer some questions. The DNA is 5' to 3' These questions refer ... DNA Sequence Variation, Epigenetics, and Gel Electrophoresis. Question 1: Describe DNA sequence variations that can be often ... 2. What are the three main types of RNA, and what are their roles? 3. Using the following DNA template strand sequence, answer ... 1. By how many nucleotides do the first six nucleotides (on the 5' end) of the first intron differ from their consensus seque. ...
  https://brainmass.com/biology/dna-chromosomes-and-genomes
*  Quantifying the Impact of Human Immunodeficiency Virus-1 Escape From Cytotoxic T-Lymphocytes
Cohort consensus sequence. For each gene in the HIV-1 genome, all viral amino acid sequences in the cohort were aligned using ... save that the individual's viral nucleotide sequence is compared with the cohort consensus nucleotide sequence and only non- ... To obtain the nucleotide consensus, the amino acid sequence was used as an alignment guide for the program tranalign (available ... were taken from the K37 HLA-epitope list and compared to the epitope in the cohort consensus amino acid sequence. Any deviation ...
  http://pubmedcentralcanada.ca/pmcc/articles/PMC2973816/
*  PCR amplification of cDNAs of fish hemoglobin β chains using a consensus primer: cDNA-derived amino acid sequences of β chains...
To obtain the complete amino acid sequence, a 20-meric redundant consensus primer based on the N-terminal amino acid sequences ... PCR amplification of cDNAs of fish hemoglobin β chains using a consensus primer: cDNA-derived amino acid sequences of β chains ... were identified by the chemical amino acid sequencing of internal peptides. Thus this PCR methodology using the consensus ... Hemoglobin amino acid sequence catfish (Parasilurus asotus) scad (Decapterus maruadsi) This is a preview of subscription ...
  https://link.springer.com/article/10.1007/BF01886865
*  CONSORF: a consensus prediction system for prokaryotic coding sequences - Semantic Scholar
Then, it fills the empty genomic regions with the CDSs supported by consensus ab initio predictions. From those consensus ... It first predicts the CDSs supported by consensus alignments. The alignments are derived from multiple genome-to-proteome ... CONSORF is a fully automatic high-accuracy identification system that provides consensus prokaryotic CDS information. ... CONSORF: a consensus prediction system for prokaryotic coding sequences. *. Sungsoo Kang, Sung-Jin Yang, Sangsoo Kim, Jong Bhak ...
  https://www.semanticscholar.org/paper/CONSORF-a-consensus-prediction-system-for-prokaryo-Kang-Yang/eac3504a554c3b8c1a63000e18c4dd91bdab7412
*  Overlapping RNA and DNA binding d... preview & related info | Mendeley
Base Sequence. *Binding Sites. *Consensus Sequence. *DNA-Binding Proteins/chemistry/genetics/*metabolis ... Our findings suggest potential cellular RNA target sequences for WT1 and provide tools for studying the structural and ... Mutational analysis pinpointed ribonucleotide sequences critical for binding. Analysis of truncated WT1 proteins demonstrated ...
  https://www.mendeley.com/research-papers/overlapping-rna-dna-binding-domains-wt1-tumor-suppressor-gene-product-1/
*  Viruses | Free Full-Text | HIV-1 Subtype C Phylodynamics in the Global Epidemic
To address inter-patient viral evolution over time, a set of 653 unique HIV-1 subtype C gag sequences were retrieved from the ... consensus sequence; amino acid frequency; Gag; gag phylogeny; CTL epitopes; time of MRCA HIV-1 subtype C; consensus sequence; ... gag sequences was 8.7% (7.7%; 9.8%). Despite the heterogeneous origins of analyzed sequences, the gamut and frequency of amino ... To address inter-patient viral evolution over time, a set of 653 unique HIV-1 subtype C gag sequences were retrieved from the ...
  http://www.mdpi.com/1999-4915/2/1/33
*  Toxins | Free Full-Text | Consequences and Utility of the Zinc-Dependent Metalloprotease Activity of Anthrax Lethal Toxin |...
Klimpel, K.R.; Arora, N.; Leppla, S.H. Anthrax toxin lethal factor contains a zinc metalloprotease consensus sequence which is ... Table 1. Alignment of MEK/MKK amino acid sequences flanking the LF cleavage sites. MEK/MKK amino acid sequences (single-letter ... Table 1. Alignment of MEK/MKK amino acid sequences flanking the LF cleavage sites. MEK/MKK amino acid sequences (single-letter ... protein sequence HEFGHAV) containing a motif characteristic of metalloproteases (HEXXH, where X is any amino acid) [30]. ...
  http://www.mdpi.com/2072-6651/2/5/1038/htm
*  Viruses | Free Full-Text | HIV-1 Subtype C Phylodynamics in the Global Epidemic | Notes
To address inter-patient viral evolution over time, a set of 653 unique HIV-1 subtype C gag sequences were retrieved from the ... consensus sequence. amino acid frequency. Gag. gag phylogeny. CTL epitopes. time of MRCA. ...
  http://www.mdpi.com/1999-4915/2/1/33/notes
*  Patent US6153421 - Cloned genomes of infectious hepatitis C viruses and uses thereof - Google Patents
... and polypeptides encoded by all or part of these sequences, in the development of vaccines and diagnostics for HCV and in the ... The present invention discloses nucleic acid sequences which encode infectious hepatitis C viruses and the use of these ... consensus sequence of the indicated strain. Dot: identity with consensus sequence. Capital letter: different from the consensus ... Determination of the Consensus Sequence of HC-J4 in the Plasma Pool. The consensus sequence of nucleotides 156-9371 of HC-J4 ...
  http://www.google.com/patents/US6153421?dq=5179747
*  GSC Gene - GeneCards | GSC Protein | GSC Antibody
Consensus sequence: RGGATTAR Submotif: canonical Cell Type: FrogEmbryos miRNA Products. * Search ViGene Biosciences for GSC ... Sequence Context. AA Info. Type. rs587777288. Pathogenic. 94,769,804(+). CCGCG(-/GCCGGGAGGCCCGCGCC)GCCGG. upstream-variant-2KB ... Suggested Antigen Peptide Sequences for GSC Gene. GenScript: Design optimal peptide antigens:. *Homeobox protein goosecoid (GSC ... transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding. IEA. --. ...
  http://www.genecards.org/cgi-bin/carddisp.pl?gene=GSC&phen=17&rf=/home/genecards/current/website/carddisp.pl
*  PITX1 Gene - GeneCards | PITX1 Protein | PITX1 Antibody
Consensus sequence: TAATCCCN Submotif: canonical Cell Type: Chicken GEO ID: GSE38910 miRNA Products. * Search ViGene ... Sequence Context. AA Info. Type. rs121909109. Pathogenic, Clubfoot, congenital, with or without deficiency of long bones and/or ... Suggested Antigen Peptide Sequences for PITX1 Gene. GenScript: Design optimal peptide antigens:. *Paired-like homeodomain ... Sequence-specific transcription factor that binds gene promoters and activates their transcription. May play a role in the ...
  http://www.genecards.org/cgi-bin/carddisp.pl?gene=PITX1&origene_sirna_func=2
*  NR4A1 Gene - GeneCards | NR4A1 Protein | NR4A1 Antibody
Consensus sequence: TGACCTTTNCNT Submotif: canonical Cell Type: K562 GEO ID: GSE31363 miRNA Products. * Search ViGene ... GO annotations related to this gene include transcription factor activity, sequence-specific DNA binding and sequence-specific ... Suggested Antigen Peptide Sequences for NR4A1 Gene. GenScript: Design optimal peptide antigens:. *cDNA FLJ55987, highly similar ... No data available for CIViC summary , PharmGKB 'VIP' Summary , fRNAdb sequence ontologies and piRNA Summary for NR4A1 Gene ...
  http://www.genecards.org/cgi-bin/carddisp.pl?id_type=entrezgene&id=3164
*  POU3F1 Gene - GeneCards | PO3F1 Protein | PO3F1 Antibody
Consensus sequence: WATGCAAATGAG Submotif: canonical Cell Type: NPC GEO ID: GSE35496 miRNA Products. * Search ViGene ... transcription factor activity, sequence-specific DNA binding. IEA,TAS. --. GO:0043565. sequence-specific DNA binding. IDA. ... fRNAdb sequence ontologies for POU3F1 Gene * nc_conserved_region: Non-coding region of sequence similarity by descent from a ... Suggested Antigen Peptide Sequences for POU3F1 Gene. GenScript: Design optimal peptide antigens:. *POU domain transcription ...
  http://www.genecards.org/cgi-bin/carddisp.pl?gene=POU3F1&snp=43&rf=/home/genecards/current/website/carddisp.pl
*  POU1F1 Gene - GeneCards | PIT1 Protein | PIT1 Antibody
Specifically binds to the consensus sequence 5-TAAAT-3. Activates growth hormone and prolactin genes (PubMed:22010633, PubMed: ... Specifically binds to the consensus sequence 5-TAAAT-3. Activates growth hormone and prolactin genes (PubMed:22010633, PubMed: ... Suggested Antigen Peptide Sequences for POU1F1 Gene. GenScript: Design optimal peptide antigens:. *Growth hormone factor 1 ( ... Sequence Context. AA Info. Type. rs104893755. Pathogenic, Pituitary hormone deficiency, combined, 1 (CPHD1) [MIM:613038]. ...
  http://www.genecards.org/cgi-bin/carddisp.pl?gene=POU1F1&genscript_clones_seq=2