*  PLOS Genetics: Histone H2A C-Terminus Regulates Chromatin Dynamics, Remodeling, and Histone H1 Binding
We show here that it can interact with the linker histone H1 that is important for higher order chromatin structure. We also ... The N-terminal tails of histones stick out from the nucleosomes, the building blocks of chromatin, and are involved in the ... The C-terminal H2A tail has also an important function in regulating the activity of chromatin remodelers, enzymes that can ... Together our results reflect a key function of the H2A C-terminus in chromatin biology. ...
  http://journals.plos.org/plosgenetics/article/authors?id=10.1371/journal.pgen.1001234&imageURI=info:doi/10.1371/journal.pgen.1001234.g004
*  The PBAP remodeling complex is required for histone H3.3 replacement at chromatin boundaries and for boundary functions |...
GAGA factor induces chromatin remodeling at chromatin boundaries (Nakayama et al., 2007) and, hence, we presumed that an ATP- ... Thus, chromatin is essential for the determination of cell identity. Two strategies are used to modulate a chromatin ... Model for H3.3 replacement at the chromatin boundary. GAGA factor recruits FACT and PBAP to a chromatin boundary harboring a ... GAGA factor recruits PBAP complex and HIRA to chromatin boundaries. If PBAP complex functions at chromatin boundaries, it ...
  http://dev.biologists.org/content/139/24/4582
*  Differential Salt Fractionation of Nuclei to Analyze Chromatin-associated Proteins from Cultured Mammalian Cells -BIO-PROTOCOL
Proteins such as chromatin remodelers, transcription factors, and DNA repair proteins interact dynamically with chromatin to ... The extent of association with chromatin changes rapidly in response to stresses, such as immune activation, oxidative stress, ... To elucidate changes in the composition of proteins associated with chromatin under different conditions, we adapted existing ... or viral infection, resulting in downstream effects on chromatin conformation and transcription of target genes. ...
  http://www.bio-protocol.org/cn/e2175
*  A statistical framework for modeling gene expression using chromatin features and application to modENCODE datasets | Genome...
Chromatin feature patterns. (a,b) Signal pattern (a) and correlation pattern (b) of each chromatin feature in the 160 bins ... The chromatin model was trained using the chromatin and expression data of protein-coding genes at the EEMB stage. The model ... The chromatin model is developmental stage-specific. We have previously constructed an integrative model using chromatin ... All the other chromatin features were profiled using ChIP-chip experiments. These chromatin features include histone H3 ...
  https://genomebiology.biomedcentral.com/articles/10.1186/gb-2011-12-2-r15
*  Genes | Free Full-Text | RNF20-SNF2H Pathway of Chromatin Relaxation in DNA Double-Strand Break Repair
Moreover, the connection between H2B ubiquitylation and the chromatin remodeling activity of SNF2H has been elucidated. In this ... Rapid progress in the study on the association of histone modifications with chromatin remodeling factors has broadened our ... understanding of chromatin dynamics in DNA transactions. In DNA double-strand break (DSB) repair, the well-known mark of ... This article belongs to the Special Issue Chromatin Dynamics) View Full-Text , Download PDF [422 KB, uploaded 14 July 2015] , ...
  http://www.mdpi.com/2073-4425/6/3/592
*  Biology | Free Full-Text | Myogenic Differential Methylation: Diverse Associations with Chromatin Structure | HTML
For LSP1, alternative promoter usage and active promoter-type chromatin were linked to highly specific myogenic or lymphogenic ... DMRs co-localized with a variety of chromatin structures, as deduced from ENCODE whole-genome profiles. Myogenic ... For example, MARVELD2 exhibited myogenic hypermethylation in transcription-type chromatin that overlapped a silenced promoter ... Both myogenic hypermethylation and hypomethylation often overlapped weak transcription-type chromatin and Polycomb-repressed- ...
  http://mdpi.com/2079-7737/3/2/426/htm
*  SMARCB1 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 - Homo sapiens (Human) ...
Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and the neuron-specific chromatin ... The BAF complex is able to create a stable, altered form of chromatin that constrains fewer negative supercoils than normal. ... This ATP-dependent chromatin-remodeling complex plays important roles in cell proliferation and differentiation, in cellular ... remodeling complex (nBAF complex). During neural development a switch from a stem/progenitor to a postmitotic chromatin ...
  http://www.uniprot.org/uniprot/Q12824
*  User:David Dreher/Notebook/Chromatin controlled cell pattern - OpenWetWare
Chromatin describes the complex of DNA and proteins that packs DNA into condensed structures. But this is not its only function ... Especially since the chromatin state can be passed on to progenies allowing for a fixed gene expression over multiple ... User:David Dreher/Notebook/Chromatin controlled cell pattern. From OpenWetWare. , User:David Dreher‎ , Notebook. Revision as of ... Therefore chromatin engineering yields the possibility to further understand and manipulate cell patterns in mammalian cells. ...
  https://openwetware.org/wiki/?title=User:David_Dreher/Notebook/Chromatin_controlled_cell_pattern&curid=129695&oldid=674400
*  A high‐throughput ChIP‐Seq for large‐scale chromatin studies | Molecular Systems Biology
A new approach provides a rapid and accurate genome‐wide overview of the chromatin status of multiple yeast chromatin‐ ... Nguyen UTT, Bittova L, Ller MMMU, Fierz B, David Y, Houck‐Loomis B, Feng V, Dann GP, Muir TW (2014) Accelerated chromatin ... Hon GC, Hawkins RD, Ren B (2009) Predictive chromatin signatures in the mammalian genome. Hum Mol Genet 18: R195-R201. ... A high‐throughput ChIP‐Seq for large‐scale chromatin studies. Christophe D Chabbert, Sophie H Adjalley, Bernd Klaus, Emilie S ...
  http://msb.embopress.org/content/11/1/777
*  BOL: ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such ... ChromHMM is based on a multivariate Hidden Markov Model that explicitly models the presence or absence of each chromatin mark. ... ChromHMM also produces files with genome-wide maps of chromatin state annotations that can be directly visualized in a genome ...
  http://bioinformaticsonline.com/bookmarks/view/32187/chromhmm-chromatin-state-discovery-and-characterization
*  Biomolecules | Free Full-Text | Chromatin Remodeling and Transcriptional Control in Innate Immunity: Emergence of Akirin2 as a...
... and chromatin modifiers. The growing evidence for involvement of chromatin in the regulation of gene expression in innate ... conserved novel nuclear protein Akirin2 in macrophages and its emergence as an essential link between NF-κB and chromatin ... immune cells, has uncovered an evolutionarily conserved role of microbial sensing and chromatin remodeling. Toll-like receptors ... and chromatin modifiers. The growing evidence for involvement of chromatin in the regulation of gene expression in innate ...
  http://www.mdpi.com/2218-273X/5/3/1618
*  Three-dimensional analysis of the arrangement of compact chromatin in the nucleus of G0rat lymphocytes | SpringerLink
... was studied in three-dimensional reconstructions of the ensemble of the chromatin and of individual compact chromatin bodies. ... The arrangement of compact chromatin of G0 lymphocytes ... The arrangement of compact chromatin of G0 lymphocytes was ... It is concluded that: (a) the individualized compact chromatin bodies do not correspond to an entire chromosome or to a pair of ... Comings DE (1968) The rationale for an order arrangement of chromatin in interphase nucleus. Am J Genet 20:440-460Google ...
  https://link.springer.com/article/10.1007%2FBF01696155
*  Genes | Free Full-Text | Impact of Chromatin on HIV Replication
This review highlights critical host factors that influence chromatin structure and organization and that also impact HIV ... Furthermore, recent attempts to target chromatin associated factors to reduce the HIV proviral load are discussed. ... Chromatin influences Human Immunodeficiency Virus (HIV) integration and replication. ... Keywords: HIV; chromatin; integration; transcription; latency HIV; chromatin; integration; transcription; latency ►▼ Figures ...
  http://www.mdpi.com/2073-4425/6/4/957
*  Difference between revisions of "User:David Dreher/Notebook/Chromatin controlled cell pattern" - OpenWetWare
Chromatin describes the complex of DNA and proteins that packs DNA into condensed structures. But this is not its only function ... Chromatin describes the complex of DNA and proteins that packs DNA into condensed structures. But this is not its only function ... Especially since the chromatin state can be passed on to progenies allowing for a fixed gene expression over multiple ... Especially since the chromatin state can be passed on to progenies allowing for a fixed gene expression over multiple ...
  https://openwetware.org/wiki/?title=User:David_Dreher/Notebook/Chromatin_controlled_cell_pattern&curid=129695&diff=674398&oldid=671634
*  Medizin: Chromatin
Chromatin. Klinisches W rterbuch von Otto Dornbl th. Definition und Bedeutung im historischen Lexikon der medizinischen ...
  http://www.textlog.de/12344.html
*  Chromatin nucleolus definition | Drugs.com
Definition of chromatin nucleolus. Provided by Stedman's medical dictionary and Drugs.com. Includes medical terms and ...
  https://www.drugs.com/dict/chromatin-nucleolus.html
*  chromatin condensation and cleavage
The question is: does chromatin cleavage occur earlier or later than chromatin ,condensation during apoptosis? ,Is there any ... chromatin condensation and cleavage. LOCKSHIN, RICHARD A YPRLBIO at sjumusic.stjohns.edu Mon Aug 14 09:13:16 EST 1995 *Previous ... difference between chromatin condensation of an apoptotic cell and ,of a normal cell cycle? ,Thanks. , ,Lihua He ,University of ...
  http://www.bio.net/bionet/mm/cellbiol/1995-August/002656.html
*  Meeting Theme: Transcription/Chromatin
Transcription/Chromatin. Session: Structural Transitions in Chromatin - An Exploration of Mechanisms. • DNA Accessibility in ... The "Transcription/Chromatin" annual meeting theme will contain sessions titled: "Structural Transitions in Chromatin - An ... A session titled "Alternative Chromatin Structures" will illuminate the fact that nucleosome and chromatin structure is ... functions in the context of chromatin and is regulated by its multilayered structural organization. Likewise, chromatin ...
  http://www.asbmb.org/asbmbtoday/asbmbtoday_article.aspx?id=8364
*  Understanding chromatin's cancer connection | EurekAlert! Science News
New live-cell imaging technique allows Northwestern University researchers to study chromatin's dynamic processes, including ... Understanding chromatin's cancer connection New nanoscale imaging technique allows researchers to study chromatin in live cells ... understanding-chromatins-cancer-connection.. html More in Technology & Engineering. * New UTSA study shows wearable technology ... "We know that chromatin is a major player in complex diseases," Backman said. "We just haven't had the techniques to study it. ...
  https://www.eurekalert.org/pub_releases/2016-10/nu-ucc100416.php
*  Chromatin Deregulation in Cancer [image] | EurekAlert! Science News
The image depicts six broad categories of chromatin regulatory mechanisms, which are all known to be altered via mutations in ... The image depicts six broad categories of chromatin regulatory mechanisms, which are all known to be altered via mutations in ... New book on Chromatin Deregulation in Cancer from CSHLPress. Cold Spring Harbor Laboratory ...
  https://eurekalert.org/multimedia/pub/142526.php?from=361416
*  Midwest Chromatin and Epigenetics Meeting | EurekAlert! Science News
... chromatin and epigenetics. The event will feature invited talks from 31 speakers, including a keynote address from Dr. Robert ... The 2016 Midwest Chromatin and Epigenetics Meeting (MCEM) will bring together more than 200 scientists who study transcription ...
  https://www.eurekalert.org/pub_releases/2016-02/pub-mca020216.php
*  Chromatin Remodeling and Pregnancy-Induced Differentiation | SpringerLink
Mello ML, Vidal BC, Russo IH, Lareef MH, Russo J (2007) DNA content and chromatin texture of human breast epithelial cells ... Golob JL, Paige SL, Muskheli V, Pabon L, Murry CE (2008) Chromatin remodeling during mouse and human embryonic stem cell ... Russo J., Russo I.H. (2013) Chromatin Remodeling and Pregnancy-Induced Differentiation. In: Role of the Transcriptome in Breast ... Pregnancy-induced chromatin remodeling in the breast of postmenopausal women. Int J Cancer 131(5):1059-1070. doi: 10.1002/ijc. ...
  https://link.springer.com/chapter/10.1007/978-1-4614-4884-6_7
*  Webpage devoted to Chromatin Structure Info
... James R. Bone jrbone at odin.mdacc.tmc.edu Sat Jan 25 14:37:19 EST 1997 *Previous ... with emphasis on the proteins that modify chromatin structure, and the effects that these modifications have on cell function. ... Thanks, Jim bone Chromatin Structure and Function Page http://rampages.onramp.net/~jrbone/chrom.html ... message is to announce the creation of a new WWW resource deidicated to spreading information regarding the study of chromatin ...
  http://www.bio.net/bionet/mm/bionews/1997-January/003607.html
*  Chromatin Archives - Rainbow Grocery
Miscellaneous: Chromatin, DNA, Histone deacetylase inhibitors, Histone deacetylation, Oncology, Trichostatin A, Valproic acid ( ... As a result, the chromatin* fibers of DNA become more open to chemical changes. These changes occur due to methylation ( ...
  https://www.rainbow.coop/nutritional-library/miscellaneous/chromatin/