RCSB PDB - 1GVP: GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN) Macromolecule Annotations Page
... of the gene V protein from Ff phage by X-ray crystallography. ... GENE V PROTEIN (1GVP:A) * DNA Binding * Single Stranded DNA ... All beta proteins OB-fold Nucleic acid-binding proteins Phage ssDNA-binding proteins Gene V protein Enterobacteria phage M13, ... Protein Family Annotation Pfam Database Homepage. Chains. Pfam Accession. Pfam Identifier. Pfam Description. Type. Source. ... GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN). Display Files *FASTA Sequence ...http://www.rcsb.org/pdb/explore/derivedData.do?structureId=1GVP
RCSB PDB - 1AE3: MUTANT R82C OF GENE V PROTEIN (SINGLE-STRANDED DNA BINDING PROTEIN) Literature Report Page
... of the gene V protein from Ff phage by X-ray crystallography. ... MUTANT R82C OF GENE V PROTEIN (SINGLE-STRANDED DNA BINDING ... GENE V PROTEIN A 86 Escherichia coli Mutation: R82C Gene Name(s): V ...http://www.rcsb.org/pdb/explore/litView.do?structureId=1AE3
RCSB PDB - Protein Feature View - Single-stranded DNA-binding protein DdrB - Q9RY80 (DDRB DEIRA)
The PDB archive contains information about experimentally-determined structures of proteins, nucleic acids, and complex ... ssDNA-binding protein that contributes to the ionizing radiation resistance of D.radiodurans. Plays a role in DNA repair and ... Homopentamer arranged in a ring-structure; DNA binds between subunits and along the top of the ring. The pentamers self- ... The disordered C-terminus of DdrB may mediate interactions with other proteins important for DNA damage recovery. UniProt ...http://www.rcsb.org/pdb/protein/Q9RY80
SSBP2 - Single-stranded DNA-binding protein 2 - Homo sapiens (Human) - SSBP2 gene & protein
... single-stranded DNA binding, transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA ... binding, positive regulation of transcription by RNA polymerase II, regulation of transcription, DNA-templated ... RNA polymerase II proximal promoter sequence-specific DNA binding, ... Cluster: Single-stranded DNA-binding protein 4. 355. P81877-3. Q9BWW4. Q9D032. K7C1B4. H9Z778. K9IJI4. A0A2K5UU13. A0A2J8V926. ...http://www.uniprot.org/uniprot/P81877
Single-strand DNA-binding protein - Wikipedia
Single-strand DNA-binding protein (SSB) is a protein found in Escherichia coli (E. coli) bacteria, that binds to single- ... It has a structure of three beta-strands to a single six-stranded beta-sheet to form a protein dimer. DNA-binding protein ... "Crystal structure of the homo-tetrameric DNA binding domain of Escherichia coli single-stranded DNA-binding protein determined ... As well as stabilizing this single-stranded DNA, SSB proteins bind to and modulate the function of numerous proteins involved ...https://en.wikipedia.org/wiki/Single-strand_DNA-binding_protein
Bacillus subtilis single-stranded DNA-binding protein SsbA is phosphorylated at threonine 38 by the serine/threonine...
... repair of DNA damage, to natural competence in species such as... ... all stages of DNA metabolism that involve single-stranded DNA, ... Background and purpose: Single-stranded DNA-binding proteins participate in ... Single-stranded DNA-binding proteins participate in all stages of DNA metabolism that involve single-stranded DNA, from ... B. subtilis single-stranded DNA-binding proteins have previously been found to be phosphorylated on tyrosine and arginine ...https://hrcak.srce.hr/index.php?show=clanak&id_clanak_jezik=261717
Sequence Similarity - 1PFS: SOLUTION NMR STRUCTURE OF THE SINGLE-STRANDED DNA BINDING PROTEIN OF THE FILAMENTOUS...
... similarity to other proteins binding to single-stranded nucleic acids. ... Solution structure of the single-stranded DNA binding protein of the filamentous Pseudomonas phage Pf3: ... PF3 SINGLE-STRANDED DNA BINDING PROTEIN protein, length: 78 (BLAST) Sequence Similarity Cutoff. Rank. Chains in Cluster. ... SOLUTION NMR STRUCTURE OF THE SINGLE-STRANDED DNA BINDING PROTEIN OF THE FILAMENTOUS PSEUDOMONAS PHAGE PF3, MINIMIZED AVERAGE ...http://www.rcsb.org/pdb/explore/sequenceCluster.do?structureId=1PFS&entity=1&seqid=95
Phylogenetic and complementation analysis of a single-stranded DNA binding protein family from lactococcal phages indicates a...
Phylogenetic and complementation analysis of a single-stranded DNA binding protein family from lactococcal phages indicates a ... The single-stranded-nucleic acid binding (SSB) protein superfamily includes proteins encoded by different organisms from ... However, as other proteins involved in DNA replication, bacterial SSB proteins are clearly different from those found in ... Recently new SSB proteins encoded by the virulent lactococcal bacteriophages (Orf14(bIL67)-like proteins) have been identified ...https://www.sigmaaldrich.com/catalog/papers/22073223
DNA synthesis determines the binding mode of the human mitochondrial single-stranded DNA-binding protein
... Morin, José A; Cerrón ...http://tampub.uta.fi/handle/10024/101794
Structural dynamics of E. coli single-stranded DNA binding protein reveal DNA wrapping and unwrapping pathways | eLife
... coli single-stranded DNA binding proteins and the energy landscape of the nucleo-protein complex. ... Single-molecule force and fluorescence spectroscopy reveal the structural states and dynamics of E. ... coli single-stranded DNA binding protein regulate cooperative binding to single-stranded DNA * AG Kozlov ... Role of tryptophan 54 in the binding of E. coli single-stranded DNA-binding protein to single-stranded polynucleotides * MI ...https://elifesciences.org/articles/08193
Genetic analysis of RPA single-stranded DNA binding protein in Haloferax volcanii - Nottingham ePrints
Replication protein A (RPA) is a single-stranded DNA-binding protein that is present in all three domains of life. The roles of ... Stroud, A. L. (2012) Genetic analysis of RPA single-stranded DNA binding protein in Haloferax volcanii. PhD thesis, University ... Genetic analysis of RPA single-stranded DNA binding protein in Haloferax volcanii ... To achieve this, RPA uses an oligosaccharide-binding fold (OB fold) to bind single- stranded DNA.. Haloferax volcanii encodes ...http://eprints.nottingham.ac.uk/12623/
Identification of essential and non-essential single-stranded DNA-binding proteins in a model archaeal organism - University of...
Single-stranded DNA-binding proteins (SSBs) play vital roles in all aspects of DNA metabolism in all three domains of life and ... Identification of essential and non-essential single-stranded DNA-binding proteins in a model archaeal organism. Research ... Consistent with a role for RpaC in DNA repair, elevated expression of this protein leads to enhanced resistance to DNA damage. ... PCNA-binding proteins in the archaea: novel functionality beyond the conserved core. MacNeill, S. A. Aug 2016 In : Current ...https://risweb.st-andrews.ac.uk/portal/en/researchoutput/identification-of-essential-and-nonessential-singlestranded-dnabinding-proteins-in-a-model-archaeal-organism
Single-stranded DNA-binding protein 3
May be involved in transcription regulation of the alpha 2(I) collagen gene where it binds to the single-stranded ... Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development. ... Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein ... Immunoaffinity enrichment and mass spectrometry analysis of protein methylation.. 23186163. 2013. Toward a comprehensive ...https://pharos.nih.gov/idg/targets/Q9BWW4
High-affinity RNA binding by a hyperthermophilic single-stranded DNA-binding protein
Single-stranded DNA-binding proteins (SSBs), including replication protein A (RPA) in eukaryotes, play a central role in DNA ... High-affinity RNA binding by a hyperthermophilic single-stranded DNA-binding protein. ... High-affinity RNA binding by a hyperthermophilic single-stranded DNA-binding protein ' Extremophiles , vol 21 , no. 2 , pp. 369 ... SSBs utilise an oligonucleotide/oligosaccharide-binding (OB) fold domain to bind DNA, and typically oligomerise in solution to ...https://research-repository.st-andrews.ac.uk/handle/10023/10082
Characterization and application to the detection of single-stranded DNA binding protein of fluorescent DNA-templated copper...
Characterization and application to the detection of single-stranded DNA binding protein of fluorescent DNA-templated copper/ ...https://www.growkudos.com/publications/10.1039%25252Fc1an15258k/reader
A Single-Stranded-DNA Binding-Protein Required for Mitochondrial-DNA Replication in Saccharomyces-Cerevisiae Is Homologous to...
DNA REPLICATION Mitochondrial DNA Replication SINGLE-STRANDED DNA single stranded DNA BINDING PROTEIN binding protein YEAST ... Van Dyck, E., Foury, F., Stillman, B., Brill, S. J. (1992) A Single-Stranded-DNA Binding-Protein Required for Mitochondrial-DNA ... A Single-Stranded-DNA Binding-Protein Required for Mitochondrial-DNA Replication in Saccharomyces-Cerevisiae Is Homologous to ... The primary structure of he RIM1 protein is homologous to the single-stranded DNA binding protein (SSB) from Escherichia coli ...http://repository.cshl.edu/25123/
Biochemical and Structural Investigation of the Sequence-Specific Binding Interaction between the Yeast Protein Cdc13p and...
Investigation of the Sequence-Specific Binding Interaction between the Yeast Protein Cdc13p and Single-Stranded Telomeric DNA. ... Cdc13p binds the single-stranded S. cerevisiae telomeric overhangs with high affinity (Kd=0.3 nM) and sequence specificity. We ... Telomeric DNA is composed of a non-coding, repetitive sequence, which ends in a single-stranded TG-rich overhang. In the model ... and structural methods to study the determinants of interaction between the isolated domain and single-stranded telomeric DNA. ...http://www.jbsdonline.com/c3009/c4009/biochemical-and-structural-investigation-sequence-specific-binding-interaction-between-yeast-protein-cdc13p-and-single-stranded-telomeric-dna-p10224.html
SSBP2 Gene - GeneCards | SSBP2 Protein | SSBP2 Antibody
Protein Coding), Single Stranded DNA Binding Protein 2, including: function, proteins, disorders, pathways, orthologs, and ... highly similar to Single-stranded DNA-binding protein 2 (B7Z1J2_HUMAN). *Sequence-specific single-stranded-DNA-binding protein ... Single Stranded DNA Binding Protein 2) is a Protein Coding gene. GO annotations related to this gene include single-stranded ... Protein Symbol:. P81877-SSBP2_HUMAN. Recommended name:. Single-stranded DNA-binding protein 2 Protein Accession:. P81877. ...http://www.genecards.org/cgi-bin/carddisp.pl?gene=SSBP2
Single-Stranded DNA Binding Proteins
A leader in DNA sequencing services and consumables. We are committed to providing the best services and products to ... Single-Stranded DNA Binding Protein (SSB) preferentially binds single-stranded DNA, forming a tetramer of four identical 18.9 ... Extreme Thermostable SSB is a single-stranded DNA binding protein isolated from a hyperthermophilic microorganism, which ... RecA Protein (E. coli) is necessary for genetic recombination, reactions involving DNA repair and UV-induced mutagenesis. RecA ...https://www.mclab.com/Single-stranded-DNA-Binding-Proteins/
Cell Based Assays / In vitro > Consumables Laboratory Product Directory and Equipment Reviews on...
Single-Stranded DNA Binding Protein,. Agilent Technologies. The single-stranded DNA binding protein is useful in the study of ... Agilent Protein 230 Reagents. Agilent Technologies. The Agilent Protein kit portfolio provides a fast and flexible way for the ... Agilent Protein 80 Reagents. Agilent Technologies. The Agilent Protein kit portfolio provides a fast and flexible way for the ... Agilent DNA 1000 Reagents. Agilent Technologies. The DNA kits together with the Agilent 2100 Bioanalyzer, are ideal for ...http://www.selectscience.net/cell-based-assays-+-in-vitro/product-directory/consumables/?catID=1750&u=C21EA488-EF5F-4042-9D7A-71723644D01C
KEGG PATHWAY: eoc03440
ssb; single-stranded DNA-binding protein [KO:K03111]. CE10_4345 recF; gap repair protein [KO:K03629] ... HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, ... recA; DNA strand exchange and recombination protein with protease and nuclease activity [KO:K03553] ... followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch ...http://www.genome.jp/dbget-bin/www_bget?pathway+eoc03440
Is this a single-stranded DNA binding protein? What is the difference with , USB's single-stranded DNA binding protein or GP 32 ...http://www.bio.net/bionet/mm/methods/1992-September/002105.html
damaged DNA binding. single-stranded DNA binding. protein binding. metal ion binding. nucleic acid binding. DNA binding. ... replication protein A1, 70kDa; RF-A protein 1; RP-A; RP-A p70; RPA70; Single-stranded DNA-binding protein ... Protein Aliases: HSSB; MST075; MSTP075; REPA1; Replication factor A protein 1; Replication protein A 70 kDa DNA-binding subunit ... DNA incision, 5'-to lesion nucleotide-excision repair, DNA gap filling mismatch repair DNA recombination protein sumoylation ...https://www.thermofisher.com/antibody/product/RPA-70-kDa-subunit-Antibody-Polyclonal/PA5-21976
Structure of the CRISPR Interference complex CSM reveals key similarities with Cascade - University of St Andrews
High-affinity RNA binding by a hyperthermophilic single-stranded DNA-binding protein. Morten, M. J., Gamsjaeger, R., Cubeddu, L ... DNA‐Interacting characteristics of the archaeal Rudiviral protein SIRV2_Gp1. Peeters, E., Boon, M., Rollie, C. J. C., Willaert ... DNA repair in the Archaea - an emerging picture. White, M. F. & Allers, T. 5 May 2018 In : FEMS Microbiology Reviews. Advance ... Direct observation of DNA distortion by the RSC complex. Lia, G., Praly, E., Ferreira, H., Stockdale, C., Tse-Dinh, Y. C., ...https://risweb.st-andrews.ac.uk/portal/en/researchoutput/structure-of-the-crispr-interference-complex-csm-reveals-key-similarities-with-cascade
Geoff Kneale - University of Portsmouth
Gene 5 Protein, tetraplex DNA and prions. Single-stranded DNA-binding proteins play a key role in DNA replication. The gene 5 ... protein (g5p) of filamentous bacteriophage fd is responsible for the switch from double-stranded to single-stranded viral DNA ... Using DNA footprinting and gel retardation assays (EMSA), we identified the binding sites for the C protein at the promoters ... Earlier work in our lab showed that the g5p preferentially binds to a specific 4-stranded (tetraplex) DNA structure that forms ...http://www.port.ac.uk/institute-of-biological-and-biomedical-sciences/molecular-biophysics/geoff-kneale/