*  Mouse TCR Profiling
DNA-based approaches, by contrast, do not identify TCR sequences in their translated forms, and will unavoidably yield many ... Following sequencing, read files were downsampled to 400,000 reads per sample based on the read saturation points identified ... Sequencing mRNA rather than genomic DNA specifically allows for the identification of expressed TCR sequences that have ... while still yielding sequence information for the beta chain. The TCR sequences identified were attributed to CD4+ T cells, ...
  http://www.clontech.com/US/Products/cDNA_Synthesis_and_Library_Construction/NGS_Learning_Resources/Technical_Notes/Mouse_TCR_Profiling?sitex=10020:22372:US&PEBCL1=8YMtyTMirwI3ubwu3SR3ygo7EC&PEBCL1_pses=ZGE81BB9AD9B711DEEEF71A4A84BC7988DBB572E793CBC6155A9C62D1C92FD6838647251BC98433D2FD7E7091BAEEE79845D7B323303A2C72F
*  DNA - Stock Image G110/0642 - Science Photo Library
The autoradiograms depict DNA base sequences, each band (dark blue) representing an individual base. - Stock Image G110/0642 ... The sequence of the 4 base groups (adenine, cytosine, guanine and thymine; coloured rods) along the DNA helix is unique for ... which consist of a sugar phosphate and a base group. Complementary pairing between the base groups of nucleotides on opposite ... Computer artwork of a DNA (deoxyribonucleic acid) double helix seen against autoradiograms of genetic sequences (upper right). ...
  http://www.sciencephoto.com/media/210102/view
*  Transcriptome Profiling Using Single-Molecule Direct RNA Sequencing | SpringerLink
Highly integrated single-base resolution maps of the epigenome in Arabidopsis, Cell 133, 523- 536.PubMedCrossRefGoogle Scholar ... RNA sequencing Single-molecule sequencing Transcriptome profiling Polyadenylation site mapping Springer Nature is developing a ... We have developed a direct RNA sequencing (DRS) approach, in which, unlike other technologies, RNA is sequenced directly ... Southern, E. M., Maskos, U., and Elder, J. K. (1992) Analyzing and comparing nucleic acid sequences by hybridization to arrays ...
  https://link.springer.com/protocol/10.1007%2F978-1-61779-089-8_4
*  RACE for 5' and 3' cDNA ends, even for GC-rich transcripts
If you are working with only a few genes, RACE is more economical than Next-Generation Sequencing (NGS) for this purpose. ... SD Base * Yeast Media-One Hybrid * Yeast Media Two-Hybrid * YPDA & YPD Rich Media ... As such, it is important to have 5'- and 3'-sequence information in order to learn more about the different transcripts that ... Researchers often rely on Rapid Amplification of cDNA Ends (RACE) to acquire full-length sequence of RNA transcripts. ...
  http://www.clontech.com/US/Products/cDNA_Synthesis_and_Library_Construction/RACE_Rapid_Amplification_of_cDNA_Ends/RACE_Overview?sitex=10020:22372:US&PEBCL1=suphWgtkLuiwQDG0gCLXVRGQzV&PEBCL1_pses=ZG758E3CEF3953A99FA57F664ADFADF91C2C45283788F9F2473AD4AAA0A881D5B2BEB7F37271BB7FFB8076011C9558A77872DC88C2C19E4D62
*  Patent US4675283 - Detection and isolation of homologous, repeated and amplified nucleic acid ... - Google Patents
This approach permits detection of selectively amplified DNA sequences and identification of the DNA sequences that have been ... the DNA is denatured in situ and allowed to reanneal within the gel so that homologous DNA sequences present within restriction ... A novel method for detecting and isolating DNA sequences commonly held by different DNA preparations or repeated or amplified ... a non-repeated sequence of a few hundred thousand to a few million base pairs in sequence. The chromosomes of eukaryotes, being ...
  http://www.google.com/patents/US4675283?dq=5754119
*  Genetics of cosQ, the DNA-Packaging Termination Site of Phage λ: Local Suppressors and Methylation Effects | Genetics
... sequence from base pairs 48,473 to 48,479, containing two mutations, and the sequence 5′-GGGCCCT-3′ from base pairs 48,474 to ... Sequence designations: All references to λ sequence are based on the numbering convention described by Daniels et al. (1983). ... T base pair or a T:A base pair between cosQ base pairs 48,475 and 48,476 (see Wieczoreket al. 2002, Table 2). That is, Rev12 of ... we found a second cosQ-related sequence in base pairs 48,474-48,480: 5′-GGTTCCT-3′. This second cosQ sequence is shifted 1 bp ...
  http://www.genetics.org/content/165/1/11
*  THE EVOLUTION LIST: March 2010
... assuming a three-base reading frame), then that the DNA sequence does indeed contain "meaningful" information: it is encoded in ... If the DNA sequence ACA is located in the template strand of an actively transcribed DNA sequence (i.e. a DNA sequence ... If, for example, this sequence is part of a longer sequence of nucleotides in a longer DNA molecule, then there are several ... 2) the DNA nucleotide sequence ACA could be hydrogen bonded to the complementary sequence TGT (i.e. "thymine-guanine-thymine") ...
  http://evolutionlist.blogspot.co.nz/2010/03/
*  A Molecular Biology Glossary
... the sequence of a DNA is a buzz word for the structure of a DNA molecule, in terms of the sequence of bases it contains. As a ... See also Shotgun sequencing.. Shotgun sequencing: A way of determining the sequence of a large DNA fragment which requires ... Consensus sequence: A nominal sequence inferred from multiple, imperfect examples. Multiple lanes of shotgun sequence can be ... in bases or base pairs). See "Gel Electrophoresis". This is the gel of choice for DNA or RNA in the range of thousands of bases ...
  http://seqcore.brcf.med.umich.edu/sites/default/files/html/educ/dnapr/mbglossary/mbgloss.html
*  BiO BB] Web Based Sequence Manipulations
... hz5 at njit.edu hz5 at njit.edu Tue Jun 11 13:35:46 EDT 2002 *Previous message (by ... I am hoping that your collective brains can help me find a web based , software suite to do some simple DNA sequence ... We will complete the class by cloning and sequenceing a gene, , and , we would like to do some sequence analysis with the ... Simply , looking at the sequence, translation, rev/comp sorts of things. , However, , we don't really want to install software ...
  http://bioinformatics.org/pipermail/bbb/2002-June/000729.html
*  Base Sequence Analysis
... A method, sometimes automated, for determining the base sequence.. Selected base sequence analysis ...
  http://healthboard.com/Encyclopedia/Biotech/term/base_sequence_analysis.html
*  A DNA sequence-based identification checklist for Taiwanese chondrichthyans
... Dataset homepage. Citation. Naylor G J P (2012). A ... DNA sequence-based identification checklist for Taiwanese chondrichthyans. Plazi.org taxonomic treatments database. Checklist ... This dataset contains the digitized treatments in Plazi based on the original journal article Straube, Nicolas, White, William ... T., Ho, Hsuan-Ching, Rochel, Elisabeth, Corrigan, Shannon, Li, Chenhong, Naylor, Gavin J. P. (2013): A DNA sequence-based ...
  https://www.gbif.org/dataset/0486185a-4e5f-4536-8486-78389f2699d7
*  Reduced Representation Libraries from DNA Pools Analysed with Next Generation Semiconductor Based-Sequencing to Identify SNPs...
The identification of polymorphisms was based on the construction and sequencing of two RRLs generated from DNA pools of pigs ... Ion Torrent Sequencing. Sequencing of the two RRLs was obtained using 200 ng of DNA that was purified by agarose gel ... Sequencing Data and Identification of SNPs. A total of 3,390,796 and 3,731,776 sequenced reads were obtained from the two RRLs ... Reduced Representation Libraries from DNA Pools Analysed with Next Generation Semiconductor Based-Sequencing to Identify SNPs ...
  https://www.hindawi.com/journals/ijg/2015/950737/
*  US Patent # 5,405,747. Method for rapid base sequencing in DNA and RNA with two base labeling - Patents.com
Bases modified to accept fluorescent labels are used ... Method for rapid-base sequencing in DNA and RNA with two-base ... Method for rapid base sequencing in DNA and RNA with two base labeling Abstract. Method for rapid-base sequencing in DNA and ... Bases modified to accept fluorescent labels are used to replicate a single DNA or RNA strand to be sequenced. The bases are ... For three bases, three sequences of two bases each are required. FIG. 3a illustrates two fluorescent dyes attached through ...
  http://patents.com/us-5405747.html
*  Sequence Based Gene Expression Analysis | Springer for Research & Development
Matukumalli L.K., Schroeder S.G. (2009) Sequence Based Gene Expression Analysis. In: Edwards D., Stajich J., Hansen D. (eds) ... Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence. Nature ... Boguski MS, Lowe TM, Tolstoshev CM (1993) dbEST - database for "expressed sequence tags". Nat Genet 4:332-333CrossRefPubMed ... Camargo AA, Samaia HP, Dias-Neto E, Simao DF, Migotto IA, Briones MR et al (2001) The contribution of 700,000 ORF sequence tags ...
  https://rd.springer.com/chapter/10.1007/978-0-387-92738-1_9
*  Training Sequence Based Frequency-Domain Channel Estimation for Indoor Diffuse Wireless Optical Communications - TechRepublic
Based on the Training Sequence (TS), this paper ... ... Based on the Training Sequence (TS), this paper develops three ... Training Sequence Based Frequency-Domain Channel Estimation for Indoor Diffuse Wireless Optical Communications. ...
  https://www.techrepublic.com/resource-library/whitepapers/training-sequence-based-frequency-domain-channel-estimation-for-indoor-diffuse-wireless-optical-communications/
*  PGP to Select Participants for Sequencing Based on Phenotype; Will Include Microbiome Data | GenomeWeb
PGP to Select Participants for Sequencing Based on Phenotype; Will Include Microbiome Data. Oct 12, 2010 ... Home » PGP to Select Participants for Sequencing Based on Phenotype; Will Include Microbiome Data ... Harvard Medical School's Personal Genome Project will choose participants for whole-genome sequencing based on their phenotype ... A trial upgrade to GenomeWeb Premium gives you full site access, interest-based email alerts, access to archives, and more. ...
  https://www.genomeweb.com/sequencing/pgp-select-participants-sequencing-based-phenotype-will-include-microbiome-data
*  Plus it
Clonal Variation in Pinot noir Revealed by S-SAP Involving Universal Retrotransposon-Based Sequences Eva Wegscheider, Andrej ... Clonal Variation in Pinot noir Revealed by S-SAP Involving Universal Retrotransposon-Based Sequences Eva Wegscheider, Andrej ... Clonal Variation in Pinot noir Revealed by S-SAP Involving Universal Retrotransposon-Based Sequences. Eva Wegscheider, Andrej ... Clonal Variation in Pinot noir Revealed by S-SAP Involving Universal Retrotransposon-Based Sequences ...
  http://www.ajevonline.org/content/60/1/104
*  Chaos based PN sequence generator for cryptographic applications - IEEE Conference Publication
Strength of cryptographic cipher depends on the statistical performance of its generated keystream. Generation of high quality keystream is a challenging t
  http://ieeexplore.ieee.org/document/6150443/?reload=true
*  Assembly of DNA Rotaxanes for AFM Based DNA Sequencing
... ability to detect piconewton scale forces in order to read off sequencing information based on the interaction of nucleotides ... Many new sequencing technologies are being developed to achieve these goals. Our technique takes advantage of the atomic force ... We have successfully completed two of the major pieces needed to sequence DNA with an AFM. The problem of nonspecific adhesion ... The desire to sequence DNA is fueled by the knowledge that the information locked inside of genomes can help fields as varied ...
  http://www.nsti.org/Nanotech2006/showabstract.html?absno=864
*  Sequenced based data supports a single Nostoc strain in coralloid roots of cycads
... Costa, José Luis Uppsala University, ... The sequence alignment of the Nostoc tRNALeu (UAA) introns reveals great sequence similarity with size variation only found in ...
  http://uu.diva-portal.org/smash/record.jsf?pid=diva2:165070
*  Biology | Free Full-Text | Sequence-Based Analysis of Structural Organization and Composition of the Cultivated Sunflower ...
Here we report on the sequencing, assembly, and analyses of 96 randomly chosen BACs from sunflower to provide additional ... Sequence-Based Analysis of Structural Organization and Composition of the Cultivated Sunflower (Helianthus annuus L.) Genome. ... Sequence-Based Analysis of Structural Organization and Composition of the Cultivated Sunflower (Helianthus annuus L.) Genome. ... "Sequence-Based Analysis of Structural Organization and Composition of the Cultivated Sunflower (Helianthus annuus L.) Genome." ...
  http://mdpi.com/2079-7737/3/2/295/xml
*  sequor: A sequence labeler based on Collins's sequence perceptron.
... The sequor package. [ Tags: bsd3, library, natural-language- ... sequor 0.2.2 AUTHOR: Grzegorz Chrupała ,gchrupala@lsv.uni-saarland.de, Sequor is a sequence labeler based on Collins's sequence ... If passed a sequence they are applied to each of its elements. For example (Suffix 3 (Row 0)) will return the sequence of ... array (,=0.2), base (,=3 && ,5), binary (,=0.5), bytestring (,=0.9), containers (,=0.2), mtl (,=1.1), pretty (,=1.0), text (,= ...
  http://hackage.haskell.org/package/sequor-0.2.3
*  Intermediary Metabolism in Protists: a Sequence-based View of Facultative Anaerobic Metabolism in Evolutionarily Diverse...
The sequence-based predictions (Fritz-Laylin et al. 2010; Hug et al. 2010) and experimental validation (Dubini et al. 2009; Mus ... Retention and loss of amino acid biosynthetic pathways based on analysis of whole-genome sequences. Eukaryot Cell. 2006;5:272- ... Since genomic sequencing has so far only touched the surface of protist diversity, it is anticipated that sequences of ... Intermediary Metabolism in Protists: a Sequence-based View of Facultative Anaerobic Metabolism in Evolutionarily Diverse ...
  http://pubmedcentralcanada.ca/pmcc/articles/PMC3021972/?lang=en-ca
*  A rules of thumb-based design sequence for diffuse daylight
... Reinhart, C. F.; LoVerso, V. R. M.; Scartezzini, Jean-Louis; ... This paper proposes and validates a daylighting design sequence for sidelit spaces. Since the design sequence uses the daylight ... The sequence interconnects and refines earlier proposed rules of thumb and is intended to be used during the earliest design ... Step four provides a more accurate estimate of the required glazing area for each zone based on the Lynes daylight factor ...
  https://infoscience.epfl.ch/record/169826