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*  "pH-Dependent Expression of Periplasmic Proteins and Amino Acid Catabol" by Joan Slonczewski, Lauren M. Stancik et al.
pH modulated the expression of several periplasmic and outer membrane proteins: acid induced YcdO and YdiY; base induced OmpA, ... At low pH, several acetate-induced proteins were elevated (LuxS, Tpx, and YfiD), whereas acetate-repressed proteins were ... MalE, and YceI; and either acid or base induced OmpX relative to pH 7. Two pH-dependent periplasmic proteins were redox ... High pH induced amino acid metabolic enzymes (TnaA and CysK) as well as lac fusions to the genes encoding AstD and GabT. These ...
  https://digital.kenyon.edu/biology_publications/134/
*  NAVER Academic | In Saccharomyces cerevisiae a short amino acid sequence facilitates excretion in the growth medium of...
... facilitating the crossing of the yeast cell wall in vivo and facilitating extraction of periplasmic proteins by non-disruptive ... other factors besides molecular sieving may play a role in partitioning of periplasmic proteins. By using several complementary ... galactosidase in vivo and facilitate extraction of periplasmic proteins in vitro. Immunological data obtained by flow cytometry ... This amino acid sequence may define a novel type of topogenic sequence, ...
  https://academic.naver.com/article.naver?doc_id=139583372
*  Frontiers | The Subtleties and Contrasts of the LeuO Regulator in Salmonella Typhi: Implications in the Immune Response |...
pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli. J Bacteriol (2002) 184(15):4246- ... A large family of bacterial activator proteins. Proc Natl Acad Sci U S A (1988) 85(18):6602-6. doi:10.1073/pnas.85.18.6602 ... Global analysis of proteins synthesized during phosphorus restriction in Escherichia coli. J Bacteriol (1996) 178(15):4344-66. ... LeuO protein delimits the transcriptionally active and repressive domains on the bacterial chromosome. J Biol Chem (2005) 280( ...
  https://www.frontiersin.org/articles/10.3389/fimmu.2014.00581/full
*  Student research
pH-Dependent Expression of Periplasmic Proteins and Amino Acid Catabolism in Escherichia coli. Journal of Bacteriology, in ... Global induction of proteins by benzoate at low pH in Escherichia coli. J.Bacteriol. 179:7595-7599. *Sheridan, S.L.*, K.A. ... pH-Dependent protein profiles of Helicobacter pylori analyzed by two-dimensional gels. Helicobacter 5:240-247. *Itagaki, H. and ... Beck*, C. A., J. J. DePowell* and W. H. Powell (2002) Characterization of aryl hydrocarbon signaling proteins from Xenopus ...
  http://biology.kenyon.edu/stures/pubs.htm
*  Joan L. Slonczewski C.V.
pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli. J. Bacteriol. 184:4246-4258. PDF ... Periplasmic acid stress increases cell division asymmetry (polar aging) of Escherichia coli. PLoS ONE 10:e0144650.. Harden, M. ... Global induction of proteins by benzoate at low pH in Escherichia coli. J. Bacteriol. 179:7595-7599. ... pH-Dependent protein profiles of Helicobacter pylori analyzed by two-dimensional gels. Helicobacter 5:240-247. ...
  http://biology.kenyon.edu/slonc/jls-cv.htm
*  ASMscience | Regulatory RNAs in Virulence and Host-Microbe Interactions
... summarizes our current understanding of the contribution of the different classes of regulatory RNAs and RNA-binding proteins ... pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli. J Bacteriol 184:4246-4258. [ ... Grad-seq guides the discovery of ProQ as a major small RNA-binding protein. Proc Natl Acad Sci U S A 113:11591-11596. [PubMed] ... RNA- and protein-mediated control of Listeria monocytogenes virulence gene expression. RNA Biol 14:460-470. [PubMed]. ...
  http://www.asmscience.org/content/journal/microbiolspec/10.1128/microbiolspec.RWR-0002-2017
*  YceI protein domain - Wikipedia
... "pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli". J. Bacteriol. 184 (15): 4246-58 ... In molecular biology, Yce-I protein domain is a putative periplasmic protein. This entry represents the lipid-binding protein ... "Crystal structure of a novel polyisoprenoid-binding protein from Thermus thermophilus HB8". Protein Sci. 14 (4): 1004-10. doi: ... Both of these proteins share a common domain with an 8-stranded beta-barrel fold. This resembles the lipocalin fold, although ...
  https://en.wikipedia.org/wiki/YceI_protein_domain
*  Natural Selection in Virulence Genes of Francisella tularensis | SpringerLink
... pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli. J Bacteriol 184(15):4246-4258. ... Hormoz S (2013) Amino acid composition of proteins reduces deleterious impact of mutations. Scientific Reports. doi: 10.1038/ ... Sengupta D, Kundu S (2012) Do topological parameters of amino acids within protein contact networks depend on their physico- ... energetic and conformational properties of amino acid residues in globular proteins. J Theor Biol 80(4):485-504. doi: 10.1016/ ...
  https://link.springer.com/article/10.1007%2Fs00239-016-9743-y
*  IJMS | Free Full-Text | Branched-chain Amino Acid Biosensing Using Fluorescent Modified Engineered Leucine/Isoleucine/Valine...
... was developed based on engineered leucine/isoleucine/valine-binding proteins (LIVBPs)conjugated with environmentally sensitive ... A novel fluorescence sensing system for branched-chain amino acids (BCAAs) ... valine-binding protein (LIVBP); branched-chain amino acid (BCAA) Periplasmic binding proteins (PBPs); biosensor; fluorescence; ... Branched-chain Amino Acid Biosensing Using Fluorescent Modified Engineered Leucine/Isoleucine/Valine Binding Protein. Sakura ...
  http://www.mdpi.com/1422-0067/8/6/513
*  US5719041A - DNA encoding ecotin homologs - Google Patents
Ecotin refers to that E. coli periplasmic protein having the 142 amino acid residue sequence reported by McGrath, et al., J. ... the protein resulting from the substitution of an amino acid in the ecotin amino acid sequence by a conservative amino acid ... The term amino acid or amino acid residue, as used herein, refers to naturally-occurring L α-amino acids or residues, unless ... however bacterial proteins are used to treat acute indications. An example of such a protein is streptokinase, a protein ...
  https://patents.google.com/patent/US5719041?oq=patent%3A5992892
*  Top-Down Characterization of the Post-Translationally Modified Intact Periplasmic Proteome from the Bacterium Novosphingobium...
... "pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli," Journal of Bacteriology, vol. ... A. Chi, L. Valenzuela, S. Beard et al., "Periplasmic proteins of the extremophile acidithiobacillus ferrooxidans: a high ... X. Liu, Y. Sirotkin, Y. Shen et al., "Protein identification using top-down," Molecular and Cellular Proteomics, vol. 11, no. 6 ... D. Missiakas and S. Raina, "Protein folding in the bacterial periplasm," Journal of Bacteriology, vol. 179, no. 8, pp. 2465- ...
  https://www.hindawi.com/journals/ijpro/2013/279590/ref/
*  Periplasmic Binding Transport Protein CBCRY22 - Creative BioMart
DEBP(DEBP, Periplasmic Binding Transport Protein) can be used for N/A. ... Purified Periplasmic Binding Transport Protein from Creative Biomart. ... Glutamic acid; 2-amino-2-hydroxymethyl-propane-1,3-diol. Reference:. Hu, Y.L., Fan, C.-P., Fu, G.S., Zhu, D.Y., Jin, Q., Wang, ... Periplasmic Binding Transport Protein. Download Datasheet See All DEBP Products. Bring this labeled protein directly to your ...
  https://www.creativebiomart.net/description_553_23.htm
*  Influence of pH control in the formation of inclusion bodies during production of recombinant sphingomyelinase-D in Escherichia...
IBs have been considered as non-usable proteins, but recently they are being used as functional materials, catalytic particles ... However, few studies have been made to understand how culture conditions affect the protein aggregation and the physicochemical ... Particularly, uncontrolled pH conditions favored the protein aggregation and sphingomyelinase-D IB formation. The evidence may ... drug delivery agents, immunogenic structures, and as a raw material in recombinant therapeutic protein purification. ...
  https://microbialcellfactories.biomedcentral.com/articles/10.1186/s12934-014-0137-9
*  napA - Periplasmic nitrate reductase - Escherichia coli 113303 - napA gene & protein
Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction ... p>This subsection of the 'Function' section describes the interaction between a single amino acid and another chemical entity. ... to allow unambiguous identification of a protein.,p>,a href='/help/protein_names' target='_top'>More...,/a>,/p>Protein namesi. ... PROSITE; a protein domain and family database. More...PROSITEi. View protein in PROSITE. PS51669 4FE4S_MOW_BIS_MGD, 1 hit. ...
  https://www.uniprot.org/uniprot/U9XF55
*  napA - Periplasmic nitrate reductase precursor - Salmonella agona (strain SL483) - napA gene & protein
Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction ... p>This subsection of the 'Function' section describes the interaction between a single amino acid and another chemical entity. ... Protein. Similar proteins. Organisms. Length. Cluster ID. Cluster name. Size. B5EYU5. Q57M92. B5R233. B4TAT3. B4SYT3. Q8ZNH6. ... to allow unambiguous identification of a protein.,p>,a href='/help/protein_names' target='_top'>More...,/a>,/p>Protein namesi. ...
  http://www.uniprot.org/uniprot/B5EYU5
*  Network Portal - Gene MMP0210
amino acid ABC transporter periplasmic protein 81, 140. MMP0554. SAM-binding motif-containing protein 129, 140. ... hypothetical protein MMP0788 58, 117. MMP0865. aminotransferase (subgroup II) adenosylmethionine-8-amino-7-oxononanoate ... hypothetical protein MMP0999 95, 140. MMP1068. K+-dependent Na+/Ca+ exchanger related-protein:Sodium/calcium exchanger membrane ...
  http://networks.systemsbiology.net/mmp/gene/MMP0210
*  napA - Periplasmic nitrate reductase precursor - Escherichia coli O9:H4 (strain HS) - napA gene & protein
Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction ... p>This subsection of the 'Function' section describes the interaction between a single amino acid and another chemical entity. ... Protein. Similar proteins. Organisms. Length. Cluster ID. Cluster name. Size. A8A268. Q8CVW4. B1IY66. B7N5G7. B6I1A4. B7LJU7. ... to allow unambiguous identification of a protein.,p>,a href='/help/protein_names' target='_top'>More...,/a>,/p>Protein namesi. ...
  http://www.uniprot.org/uniprot/A8A268
*  napA - Periplasmic nitrate reductase precursor - Vibrio fischeri (strain ATCC 700601 / ES114) - napA gene & protein
Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction ... p>This subsection of the 'Function' section describes the interaction between a single amino acid and another chemical entity. ... Protein. Similar proteins. Organisms. Length. Cluster ID. Cluster name. Size. Q5E3J6. UPI0007C4FD75. B5FGW1. A0A1B9P522. B7VRL0 ... to allow unambiguous identification of a protein.,p>,a href='/help/protein_names' target='_top'>More...,/a>,/p>Protein namesi. ...
  http://www.uniprot.org/uniprot/Q5E3J6
*  napA - Periplasmic nitrate reductase precursor - Vibrio cholerae serotype O1 (strain M66-2) - napA gene & protein
Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction ... p>This subsection of the 'Function' section describes the interaction between a single amino acid and another chemical entity. ... Protein. Similar proteins. Organisms. Length. Cluster ID. Cluster name. Size. C3LVU3. A5EZX9. Q9KLR4. A0A0H7BW39. A0A0H3Q1R7. ... Protein. Similar proteins. Organisms. Length. Cluster ID. Cluster name. Size. C3LVU3. A5EZX9. Q9KLR4. A0A0H7BW39. A0A0H3Q1R7. ...
  http://www.uniprot.org/uniprot/C3LVU3
*  napA - Periplasmic nitrate reductase precursor - Cupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CIP 107171 / LMG...
Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction ... Protein. Similar proteins. Organisms. Length. Cluster ID. Cluster name. Size. B3R8B4. P39185. UPI0002045333. Q46RX3. A0A2A4M6Q1 ... p>This subsection of the 'Function' section describes the interaction between a single amino acid and another chemical entity. ... to allow unambiguous identification of a protein.,p>,a href='/help/protein_names' target='_top'>More...,/a>,/p>Protein namesi. ...
  http://www.uniprot.org/uniprot/B3R8B4
*  Control of NMDA Receptor Function by the NR2 Subunit Amino-Terminal Domain | Journal of Neuroscience
The periplasmic amino acid binding proteins as a group are shorter than the amino-terminal domain of the NR2 subunit, raising ... The ATD of the NR2 subunits is a bilobed structure similar to the bacterial periplasmic amino acid binding proteins and the ... The ATD of the NR2 subunit shows weak homology with bacterial periplasmic amino acid binding proteins and mGluR1, whose atomic ... Amino acid numbering is done according to full-length protein, including the signal peptide. The vector pCI-neo was used for ...
  http://www.jneurosci.org/content/29/39/12045
*  Forex scalper price action
The cpDNA-encoded proteins in- Page 542 trn rpl21 trn 5S Forex scalper price action. CreA is a 157-amino-acid periplasmic ... protein effects forex scalper price action was. Forex scalper price action have pointed. are scalper price action forex edge ... 65, these proteins would be logical candidates for the integration of PTS- dependent signals. L Veenstra, G. 1 0. Abilities and ... Aggregation is favored by conditions such as elevated temperature and high protein concentration. 206. Stir to forex scalper ...
  http://retzepti.ru/forex-scalper-price-action.html
*  Frontiers | Defining the metabolic requirements for the growth and colonization capacity of Campylobacter jejuni | Frontiers in...
... identified the putative amino acid transporter Cj0903c and the periplasmic binding protein LivJ of the LIV branched-chain amino ... jejuni and shows best homologies to various periplasmic binding proteins of ABC-type amino acid transporters (Pawelec et al., ... one ATP-binding protein and one periplasmic substrate-binding protein Peb1A (Cj0921c). The latter has been first described as ... three additional periplasmic proteins that belong to the family 3 of solute-binding proteins, which might also facilitate the ...
  https://www.frontiersin.org/articles/10.3389/fcimb.2014.00137/full
*  David B. McKay | Stanford Medicine Profiles
The periplasmic molecular chaperone protein SurA facilitates correct folding and maturation of outer membrane proteins in Gram- ... ATPASE KINETICS OF RECOMBINANT BOVINE 70 KDA HEAT-SHOCK COGNATE PROTEIN AND ITS AMINO-TERMINAL ATPASE DOMAIN BIOCHEMISTRY Ha, J ... SurA is a periplasmic chaperone protein that facilitates maturation of integral outer membrane proteins (OMPs). Short peptides ... Kinetics of protein substrate degradation by HslUV 5th International Conference on AAA(plus) Proteins Kwon, A. R., Trame, C. B ...
  https://med.stanford.edu/profiles/david-mckay
*  Plus it
... reminiscent of bacterial periplasmic binding proteins that function to sense nutrients (including ions and amino acids) for ... l-2-amino-4-phosphonobutyric acid. 3,4-DCPG. (S)3,4-dicarboxyphenyl glycine. AMPA. α-amino-3-hydroxy-5-methyl-4- ... Koerner and Cotman (1981) initially described that the diacidic amino acid analog l-2-amino-4-phosphonobutyric acid (l-AP4) ... G-protein-coupled receptors. CNS. central nervous system. GABA. γ-aminobutyric acid. EPSP. excitatory postsynaptic potential. ...
  http://jpet.aspetjournals.org/content/299/1/12