Frontiers | A calibrated chronology of biochemistry reveals a stem line of descent responsible for planetary biodiversity |...
Superkingdom-specific domain repertoires emerged ~2.1 Gy-ago delimiting fully diversified Bacteria. Repertoires specific to ... Superkingdom-specific domain repertoires emerged ~2.1 Gy-ago delimiting fully diversified Bacteria. Repertoires specific to ... to the early emergence of Archaea to superkingdom-specific innovations compatible with a tree of life rooted in Bacteria. ... to the early emergence of Archaea to superkingdom-specific innovations compatible with a tree of life rooted in Bacteria. ...https://www.frontiersin.org/articles/10.3389/fgene.2014.00306/full
... to the Metazoa was confirmed by comparative analyses of ribosomal RNA (Kim et al., 1999; Wainright et al., 1993), and the basal ... Symbiotic bacteria (one is indicated by the arrow) coat the surface of a devescovinid flagellate (a member of the parabasalids ... The close proximity of partners in symbiosis creates opportunities for coevolution of genomes and for the lateral transfer of ... to carry out aerobic respiration. The benefit is that this association allowed oxygen to be used as a terminal electron ...http://tolweb.org/Eukaryotes/3/2000.09.08
Photobacterium profundum - Wikipedia
... this was the first time this pathway has been identified in an aerobic bacterium. Two complete F1F0 ATP synthase pathways (one ... Campanaro et al. showed that there are 544 ORF's divergent or missing from the 3TCK genome and 562 ORF's divergent or missing ... Results obtained from RNA-seq experiments revealed a complex expression pattern with a group of 22 genes having expression ... Laterally transferred elements and high pressure adaptation in Photobacterium profundum strains. BMC Genomics, 2005. 6: p. 122 ...https://en.wikipedia.org/wiki/Photobacterium_profundum
General and Applied Aspects of Halophilic Microorganisms | SpringerLink
Is the Na+-Activated NADH-Quinone-Acceptor Oxidoreductase in Marine Bacteria and Moderate Halophiles a Primary Electrogenic Na+ ... Physical Mapping and Gene Transfer Methods for Halobacterium (Haloferax) Volcanii W. Ford Doolittle, Robert L. Charlebois, Leo ... Kamel Ben-Mahrez, Irène Sorokine, Dominique Thierry, Toshiyuki Kawasumi, Shunsuke Ishii, Remy Salmon et al. ... Phylogeny of DNA-Dependent RNA Polymerases: Testimony for the Origin of Eukaryotes ...https://link.springer.com/book/10.1007%2F978-1-4615-3730-4
Frontiers | Identification and Characterization of c-di-GMP Metabolic Enzymes of Leptospira interrogans and c-di-GMP...
Cyclic di-GMP (c-di-GMP) is a special secondary messenger in bacteria, which can respond to the environment and regulate ... Cyclic di-GMP (c-di-GMP) is a special secondary messenger in bacteria, which can respond to the environment and regulate ... The most common species, Leptospira interrogans, can transfer from contaminated soil or water to the human body. It is able to ... The most common species, Leptospira interrogans, can transfer from contaminated soil or water to the human body. It is able to ...https://www.frontiersin.org/articles/10.3389/fmicb.2018.00764/full
Testing Darwinism versus Cosmic Ancestry. by Brig Klyce
20 Sep 2012: Richard Lenski's research group has analysed the evolution of aerobic citrate metabolism among cloned bacteria.. ... 5. Photosynthesis evolved by gene transfer, a What'sNEW article about a recent analysis by Jason Raymond et al., 24 Nov 2002.. ... 3 Apr 2008: What is the origin of eukaryotic RNA polymerases?. Elliott H. Margulies and Ewan Birney, "Approaches to comparative ... 6. Additional instances of horizontal gene transfer are noted on the CA webpage Viruses and Other Gene Transfer Mechanisms.. 7 ...https://panspermia.org/threetests.htm
Burkholderia - Wikipedia
Weinberg Z, Barrick JE, Yao Z, et al. (2007). "Identification of 22 candidate structured RNAs in bacteria using the CMfinder ... obligately aerobic, rod-shaped bacteria that are motile by means of single or multiple polar flagella, with the exception of ... and transfer of seven species of the genus Pseudomonas homology group II to the new genus, with the type species Burkholderia ... The conserved RNA structure Anti-hemB RNA motif is found in all known bacteria in this genus. Due to their antibiotic ...https://en.wikipedia.org/wiki/Burkholderia
Environmental effects of laundry wastewater - Wikipedia
P is needed for energy transfer, the formation of DNA, RNA and many other intermediary metabolites. Only P in orthophosphate ... Bacteria thriving in this process consume oxygen. With the depletion of oxygen, fishes die and anaerobic bacteria produce ... A complete biodegradation under aerobic conditions consists of two steps, primary biodegradation and ultimate biodegradation. ... citrates et al. Steber, J., & Wiebel, F. Laundry Detergents, 4. Ecology and Toxicology. Ullmann's Encyclopedia of Industrial ...https://en.wikipedia.org/wiki/Environmental_effects_of_laundry_wastewater
Bacteria as Plant Pathogens
Molecular characterization of 16S ribosomal RNA also may distinguish bacteria from one another. Ribosomes are coded by a highly ... Cao et al. 2001). There are even a few strains of bacteria that cross kingdoms: they can infect both plants and humans. The ... Horizontal transfer, the passage of DNA from one bacterial cell to another, may be accomplished in the laboratory and is ... Some can grow slowly at 10-12°C (50-54°F). Most are aerobic, some are facultative anaerobes (i.e. they can grow with or without ...https://www.apsnet.org/edcenter/intropp/PathogenGroups/Pages/Bacteria.aspx
Frontiers | Recoding of the stop codon UGA to glycine by a BD1-5/SN-2 bacterium and niche partitioning between Alpha- and...
Quast, C., Pruesse, E., Yilmaz, P., Gerken, J., Schweer, T., Yarza, P., et al. (2013). The SILVA ribosomal RNA gene database ... Many of these bacteria are known to be facultative aerobic chemolithoautotrophs that can use inorganic electron donors such as ... Transfer-RNAs were identified with Aragorn (Laslett and Canback, 2004). Genome completeness was estimated for each bin by ... Baker et al., 2010; Wrighton et al., 2012) and, in some cases, complete genomes (e.g., Albertsen et al., 2013; Castelle et al ...https://www.frontiersin.org/articles/10.3389/fmicb.2014.00231/full
Sunlight-mediated inactivation of health-relevant microorganisms in water: a review of mechanisms and modeling approaches -...
Biological weighting functions for bacteria are from Silverman et al. (2016) and for MS2 was modified from Fisher et al. (2011 ... is distinct from the mechanisms that exacerbate oxidative stress is that UVA wavelengths cause direct damage to transfer RNA, ... cause less inactivation of viruses and bacteria with increasing wavelength.54,55 In bacteria irradiated under aerobic ... Despite some differences in the modeling approaches used by Kohn et al. and Silverman et al., the Kohn et al. model was able to ...https://pubs.rsc.org/en/content/articlehtml/2018/em/c8em00047f
... aerobic and anaerobic bacteria present.7-9 However, the anaerobes generally outnumber the aerobic bacteria by a factor of three ... Barclay reported that if bacteria involved in mixed odontogenic infections are isolated in pure culture and transferred to ... 39 Heimdahl et al and Witcher et al reported on a series of patients failing penicillin therapy due to -lactamase producing P. ... Macrolides are bacteriostatic agents that inhibit bacterial RNA-dependent protein synthesis.18 Erythromycin has adequate ...https://www.cda-adc.ca/jcda/vol-64/issue-7/antimicrobial-t.html
NCIMB 9368 Strain Passport - StrainInfo
Smith NR, et al. Aerobic spore forming bacteria. US Dep Agric Monogr 16, 1-148, 1952 ... Paenibacillus macerans strain JCM2500 DNA for 16S ribosomal RNA, partialsequence. JCM 2500 T ... Transfer of Bacillus alginolyticus, Bacillus chondroitinus, Bacillus curdlanolyticus, Bacillus glucanolyticus, Bacillus ... and of Bacillus peoriae (Montefusco et al. 1993) as Paenibacillus peoriae comb. nov., and emended descriptions of P. lautus and ...http://www.straininfo.net/strains/4826
Bacterium | definition of bacterium by Medical dictionary
... bacterium explanation free. What is bacterium? Meaning of bacterium medical term. What does bacterium mean? ... Looking for online definition of bacterium in the Medical Dictionary? ... bacterial (-al), adjective See: table Characteristics. Shape: There are three principal forms of bacteria. Spherical or ovoid ... Double-stranded RNA. Pseusdomonas phaseolica Bacterium. A microscopic one-celled organism. Haemophilus influenzae is a specific ...http://medical-dictionary.thefreedictionary.com/bacterium
Muller 222 Strain Passport - StrainInfo
Blastobacter denitrificans 16S ribosomal RNA gene, partial sequence;tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ... nov., a strictly aerobic bacterium isolated from an anaerobic digester. Int J Syst Evol Microbiol 53(5), 1247-1251, 2003 ... Aeschynomene indica) with Blastobacter denitrificans and to transfer Blastobacter denitrificans (Hirsch and Muller, 1985) to ... Bradyrhizobium denitrificans RNA pseudouridine synthase A (truA) gene, partial cds. LMG 8443 T ...http://www.straininfo.net/strains/5538
Corynebacterium renale (Migula) Ernst ATCC ® 19412™
Skerman VB, et al. Approved lists of bacterial names. Int J Syst Bacteriol 30: 225-420, 1980. ... Nucleotide (GenBank) : M29553 C. renale 16S ribosomal RNA. Nucleotide (GenBank) : X81909 C. renale 16S rRNA gene (CIP 103421T) ... Atmosphere: Aerobic. Name of Depositor NCTC Chain of Custody ATCC <-- NCTC <-- B Weitz strain Charita-a ...https://www.atcc.org/Products/Cells_and_Microorganisms/Bacteria/Preceptrol_Cultures/19412.aspx
Frontiers | HigB of Pseudomonas aeruginosa Enhances Killing of Phagocytes by Up-Regulating the Type III Secretion System in...
We further demonstrate that wild type bacteria that survived ciprofloxacin treatment contain higher levels of T3SS proteins and ... We further demonstrate that wild type bacteria that survived ciprofloxacin treatment contain higher levels of T3SS proteins and ... Bacteria were grown to an OD600 of 1.0, followed by total RNA isolation. The mRNA levels of exsC, exsA, pcrV, and exoU were ... Kim et al., 2011; Germain et al., 2013; Maisonneuve et al., 2013; Helaine et al., 2014; Verstraeten et al., 2015). Toxins can ...https://www.frontiersin.org/articles/10.3389/fcimb.2016.00125/full
Alphaproteobacteria - Wikipedia
... scientists often use this species to transfer foreign DNA into plant genomes. Aerobic anoxygenic phototrophic bacteria, such as ... Chilton MD, Drummond MH, Merio DJ, Sciaky D, Montoya AL, Gordon MP, Nester EW (1977). "Stable incorporation of plasmid DNA into ... The All-Species Living Tree' Project."16S rRNA-based LTP release 106 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA ... The basal group is Magnetococcidae, which is composed by a large diversity of magnetotactic bacteria, but only one is described ...https://en.wikipedia.org/wiki/Alphaproteobacteria
Replies to Cosmic Ancestry, 2012. by Brig Klyce
The evolution of aerobic citrate metabolism among cloned bacteria., What'sNEW, 19 Sep 2012. From: Mike Behe , 24 Sep , 10:12 AM ... Inter-Kingdom Horizontal DNA Transfer in all directions: Infectious bacteria evolve by acquiring protein domains from ... the evolution of aerobic citrate metabolism (Lenski et al.) , to Michael Behe , 21 Sep 2012 ... The RNA World... is the local webpage about origin-of-life theories, with a link to another of Mulkidjanian's articles, posted ...https://panspermia.org/replies15.htm
Non-contiguous finished genome sequence and description of Bartonella florenciae sp. nov.
B. florenciae is an aerobic, rod-shaped, Gram-negative bacterium. Here we describe the features of this organism, together with ... and a vector that transfers the bacteria from the reservoir to a susceptible host. Thus, bartonellae may be identified and ... The prediction of RNAs genes, i.e., rRNAs, tRNAs and other RNAs was carried out using RNAmmer  and ARAGORN  algorithms ... In this study, we used both the genetic criteria of La Scola et al. and the genome sequence, as well as the main phenotypic ...http://standardsingenomics.org/content/9/1/185/
Geobacillus caldoxylosilyticus (Ahmad et al.) Fortina et al. ATCC ®
nov., an obligately thermophilic, xylose-utilizing, endospore-forming bacterium. Int. J. Syst. Evol. Microbiol. 50: 517-523, ... Nucleotide (GenBank) : AF067651 Bacillus caldoxylolyticus 16S ribosomal RNA gene, partial sequence. Basic Documentation Product ... Geobacillus caldoxylosilyticus (Ahmad et al.) Fortina et al. (ATCC® 700356™) Strain Designations: S.1812 [DSM 12041] / Type ... Geobacillus caldoxylosilyticus (Ahmad et al.) Fortina et al. ATCC® 700356™ freeze-dried ...https://www.atcc.org/en/Products/Cells_and_Microorganisms/Bacteria/Alphanumeric_Genus__Species/700356.aspx
Frontiers | Bacterial Active Community Cycling in Response to Solar Radiation and Their Influence on Nutrient Changes in a High...
In total, our results reveal that both the structure and the diversity of the active bacteria community was extremely dynamic ... We did not detect ammonia or nitrite oxidizing bacteria in-situ, but both functional groups (Nitrosomona and Nitrospira) ... by a high level of nitrate accumulation during hours of high radiation and temperature associated with nitrifying bacteria ... to pyrolibraries by Cyanobacteria and an increase of Proteobacteria and other initially low frequently and rare bacteria phyla ...https://www.frontiersin.org/articles/10.3389/fmicb.2016.01823/full
Haloferax volcanii - Wikipedia
Hartman, AL; Norais, C; Badger, JH; Delmas, S; Haldenby, S; Madupu, R; Robinson, J; Khouri, H; Ren, Q; Lowe, TM; Maupin-Furlow ... It is primarily aerobic, but is capable of anaerobic respiration under anoxic conditions. Recently an isolate of this species ... This practice is similar to that of other Archaea and, indeed, that of bacteria. H. volcanii cells have no cell wall and, like ... H. volcanii undergoes prolific horizontal gene transfer through a mechanism of "mating"- cell fusion. Reproduction among H. ...https://en.wikipedia.org/wiki/Haloferax_volcanii
Binary options platforms australia
... and has homologs in virtually all aerobic bacteria as well as in eukaryotes. ... Direct gene transfer into mouse muscle in vivo. 384, 399 Crespi, Opt. Opt. History of Chinese thoughts on logic. 274, 825832. ... Asakura, and Binary options platforms australia. Binary trading platform australia digoxigenin-labeled RNA on the membrane ... Brodsky GL, Muntoni F, Miocic S et al.. USA 97894449 115. The locations of the tangential Binary options platforms australia ...http://imbc-med.ru/binary-options-platforms-australia.html
Protocols and Video Articles Authored by Juan Yao
It is a red-pigmented, gram-negative, strictly aerobic and rod-shaped bacterium and shows resistance to UV radiation. Here, we ... The mutation caused an improperly aminoacylated tRNA(Ala), as suggested by aberrantly aminoacylated tRNA(Ala) and slower ... Transfer of Classical Eyeblink Conditioning with Electrical Stimulation of MPFC or Tone As Conditioned Stimulus in Guinea Pigs ... Establishment of a Colorectal Cancer Cell Line with PRL-3 and CDH22 Gene Knock-down by Lentivirus-mediated RNA Interference] ...https://www.jove.com/author/Juan_Yao