*  Octamer transcription factor - Wikipedia
An octamer transcription factor is a transcription factor which binds to the "ATTTGCAT" sequence. Examples include: Oct-1 - ... Octamer transcription factors at the US National Library of Medicine Medical Subject Headings (MeSH). ... "Characterization of chicken octamer-binding proteins demonstrates that POU domain-containing homeobox transcription factors ... POU2F1 Oct-2 - POU2F2 Oct-3/4 - POU5F1 Oct-6 - POU3F1 Oct-7 - POU3F2 Oct-8 - POU3F3 Oct-9 - POU3F4 Oct-11 - POU3F4 Petryniak B ...
  https://en.wikipedia.org/wiki/Octamer_transcription_factor
*  POU3F1 - Wikipedia
Octamer transcription factor GRCh38: Ensembl release 89: ENSG00000185668 - Ensembl, May 2017 "Human PubMed Reference:". Tobler ... "High mobility group protein 2 functionally interacts with the POU domains of octamer transcription factors". The EMBO Journal. ... POU domain, class 3, transcription factor 1 (also known as Oct-6) is a protein that in humans is encoded by the POU3F1 gene. ... "Entrez Gene: POU3F1 POU domain, class 3, transcription factor 1". Monuki ES, Kuhn R, Weinmaster G, Trapp BD, Lemke G (Sep 1990 ...
  https://en.wikipedia.org/wiki/POU3F1
*  Oct-4 - Wikipedia
Oct-4 (octamer-binding transcription factor 4) also known as POU5F1 (POU domain, class 5, transcription factor 1) is a protein ... the etymology for the naming of the octamer transcription factor. Oct-4 transcription factor is initially active as a maternal ... Enhancer Histone Nanog (transcription factor) Pribnow box RNA polymerase Transcription factors Gene regulatory network Induced ... assembly factor, MAT1, targets and enhances CAK activity on the POU domains of octamer transcription factors". The Journal of ...
  https://en.wikipedia.org/wiki/Oct-4
*  POU2F1 - Wikipedia
Sp1 transcription factor, and TATA binding protein. Octamer transcription factor GRCh38: Ensembl release 89: ENSG00000143190 - ... assembly factor, MAT1, targets and enhances CAK activity on the POU domains of octamer transcription factors". J. Biol. Chem. ... "Recruitment of octamer transcription factors to DNA by glucocorticoid receptor". Mol. Cell. Biol. 18 (6): 3416-30. PMC 108923 ... "Recruitment of Octamer Transcription Factors to DNA by Glucocorticoid Receptor". Mol. Cell. Biol. 18 (6): 3416-30. PMC 108923 ...
  https://en.wikipedia.org/wiki/POU2F1
*  Octamer-binding factor 6 (Oct-6/Pou3f1) is induced by interferon and contributes to dsRNA-mediated transcriptional responses |...
Stat1 induces transcription of interferon regulatory factor 1 (Irf1), a transcription factor that can bind to ISREs and is ... Stat1/Stat2 together with IFN regulatory factor 9 (Irf9) form the transcription factor complex IFN-stimulated gene factor 3 ( ... Consequently, POU-domain transcription factors recognise a common motif, the octamer consensus motif (ATGCAAAT; [12]). Members ... Octamer-binding factor 6 (Oct-6, Pou3f1, SCIP, Tst-1) is a transcription factor of the Pit-Oct-Unc (POU) family. POU proteins ...
  https://bmccellbiol.biomedcentral.com/articles/10.1186/1471-2121-11-61
*  Yahli Lorch | Stanford Medicine Profiles
... general transcription factors, and Mediator in a approximately 3 MDa transcription initiation complex. X-ray crystallography ... ISOLATION OF THE YEAST HISTONE OCTAMER PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA Lorch, Y ... NEAR-ZERO LINKING DIFFERENCE UPON TRANSCRIPTION FACTOR-IID BINDING TO PROMOTER DNA MOLECULAR AND CELLULAR BIOLOGY Lorch, Y., ... Binding of yeast transcription factor IID (TFIID) to the adenoviral major late promoter in circular DNA molecules caused a ...
  https://med.stanford.edu/profiles/yahli-lorch
*  Retinoid X receptor alpha - Wikipedia
"Selective binding of steroid hormone receptors to octamer transcription factors determines transcriptional synergism at the ... The protein encoded by this gene is a member of the steroid and thyroid hormone receptor superfamily of transcription factors. ... "Adipocyte-specific transcription factor ARF6 is a heterodimeric complex of two nuclear hormone receptors, PPAR gamma and RXR ... "Adipocyte-specific transcription factor ARF6 is a heterodimeric complex of two nuclear hormone receptors, PPAR gamma and RXR ...
  https://en.wikipedia.org/wiki/Retinoid_X_receptor_alpha
*  Plus it
A novel octamer binding transcription factor is differentially expressed in mouse embryonic cells. Cell 1990;60:461-72. ... A POU-domain transcription factor in early stem cells and germ cells of the mammalian embryo. Nature 1990;345:686-92. ... These transcription factors are now used to identify germ cell tumors (25-27). However, OCT3/4 and NANOG do not help with the ... Embryonic stem cell transcription factor signatures in the diagnosis of primary and metastatic germ cell tumors. Am J Surg ...
  http://clincancerres.aacrjournals.org/content/16/10/2751
*  POU3F2 - Wikipedia
Octamer transcription factor GRCh38: Ensembl release 89: ENSG00000184486 - Ensembl, May 2017 GRCm38: Ensembl release 89: ... a nervous-system specific POU domain transcription factor binding to the octamer DNA motif". Nucleic Acids Research. 21 (2): ... which occurs in several mammalian transcription factors, including the octamer-binding proteins Oct1 (POU2F1; MIM 164175) and ... POU domain, class 3, transcription factor 2 is a protein that in humans is encoded by the POU3F2 gene. N-Oct-3 is a protein ...
  https://en.wikipedia.org/wiki/POU3F2
*  Gene Report for G00000652 - Genes2Cognition Neuroscience Research Programme
Chromosomal locations have been assigned for the octamer transcription factor, Otf, gene family (previously named the octamer- ... Chromosomal location of the octamer transcription factors, Otf-1, Otf-2, and Otf-3, defines multiple Otf-3-related sequences ... Four cDNAs are novel while two clones are fragments of Nrf2 (NF-E2 related factor 2) transcription factor and Aplp1 (amyloid ... The gene encoding the transcription factor Spi-B maps to mouse chromosome 7.. Peters LL, Ciciotte SL, Su GH and Simon MC ...
  http://www.genes2cognition.org/db/gene/G00000652
*  benign myoepithelioma of salivary gland 2005:2010[pubdate] *count=100 - BioMedLib™ search engine
Octamer Transcription Factor-3; 0 / Oncogene Proteins, Fusion; 0 / POU5F1 protein, human; 0 / Proto-Oncogene Proteins; 0 / RNA- ... Transcription Factors; 0 / Tumor Suppressor Proteins; 0 / tumor suppressor protein p73 ... Risk Factors. Salivary Gland Neoplasms / epidemiology. Salivary Gland Neoplasms / ultrasonography. *[Email] Email this result ... Here we report the identification of the WNT inhibitory factor 1 (WIF1) gene as a novel HMGA2 fusion partner in a salivary ...
  http://www.bmlsearch.com/?kwr=benign+myoepithelioma+of+salivary+gland+2005:2010%5Bpubdate%5D&cxts=100&stmp=b0
*  Patent US5910487 - Cationic amphiphiles and plasmids for intracellular delivery of therapeutic ... - Google Patents
... tumor necrosis factor "TNF" and potentially transcription factors such as NF-kB, AP-1, NF-IL6 and octamer binding protein). It ... c) antisense polynucleotides, whether RNA or DNA, that are useful to inactivate transcription products of genes and which are ... Dosages of the pharmaceutical compositions of the invention will vary, depending on factors such as half-life of the ... Such factors are capable of determination by those skilled in the art. ...
  http://www.google.com/patents/US5910487
*  Recombinant Protein Complex Expression in E. coli - Current Protocols
Reconstitution of the transcription factor TFIIH: Assignment of functions for the three enzymatic subunits, XPB, XPD, and cdk7 ... A histone fold TAF octamer within the yeast TFIID transcriptional coactivator. Nat. Struct. Biol. 8: 695‐700. ... Regulation of yeast NRD1 expression by premature transcription termination. Mol. Cell 21: 641‐651. ... Bio/Technology 6: 291‐294. Selleck, W., Fortin, I., Sermwittayawong, D., Cote, J., and Tan, S. 2005. The Saccharomyces ...
  http://www.currentprotocols.com/WileyCDA/CPUnit/refId-ps0521.html?quicktabs_cp=abstract
*  CBFα3 (AML2) Is Induced by TGF-β1 to Bind and Activate the Mouse Germline Ig α Promoter | The Journal of Immunology
The core-binding factor (CBF) family of transcription factors plays a key role in hematopoiesis and bone ossification. The ... Rapid detection of octamer proteins with 'mini-extracts,' prepared from a small number of cells. Nucleic Acids Res. 17: 6419. ... In this report we show that a TGF-β1-inducible complex binds the TβRE and contains the transcription factor core-binding factor ... Regulation of transcription of the germline Igα constant region gene by an ATF element and by novel transforming growth factor- ...
  http://www.jimmunol.org/content/161/12/6751
*  IJMS | Free Full-Text | Chromatin Dynamics during Nucleotide Excision Repair: Histones on the Move | HTML
... nucleosome remodeling factors, and histone chaperones function to mobilize histones during repair. ... In particular, we discuss how NER factors and central players in chromatin dynamics such as histone modifiers, ... ATP-dependent chromatin remodeling by the Cockayne syndrome B DNA repair-transcription-coupling factor. Mol. Cell. Biol 2000, ... These data highlight that UV damage itself can cause changes in DNA wrapping around the histone octamer in vitro, which ...
  http://www.mdpi.com/1422-0067/13/9/11895/htm
*  Differential Regulation of Mouse Germline Ig γ1 and ε Promoters by IL-4 and CD40 | The Journal of Immunology
Binding sites for transcription factors C/EBP, CREB/activating transcription factor (ATF), or AP-1 are underlined. Stat6 ... 3 Abbreviations used in this paper: GL, germline; L, ligand; bZip, basic region leucine zipper; CS, consensus; Oct, octamer- ... The transcription factor BSAP (NF-HB) is essential for immunoglobulin germ-line ε transcription. J. Immunol. 152: 2904. ... Transcription factors NF-IL6 and NF-κB synergistically activate transcription of the inflammatory cytokines, IL-6 and IL-8. ...
  http://www.jimmunol.org/content/167/3/1522
*  LIF-Dependent Signaling: New Pieces in the Lego
Homeobox transcription factor Nanog. NFKb. Nuclear Factor Kappa-B. N-Myc. v-myc avian myelocytomatosis viral-related oncogene, ... OCTamer 3/4. OSM. Oncostatin M. Pem. Placenta and embryonic expression protein. PI3K. PhosphatidylInositol 3-Kinase. PIAS. ... Signal Transducer and Activator of Transcription. Susd2. Sushi domain containing 2. Tcfcp2l1. Transcription factor CP2-like 1. ... Kruppel-Like Factor 4/5. KO. Knock-Out. KRT42. Keratin 42. LIF. Leukemia Inhibitory Factor. Lifind. LIF-induced. LIFR. LIF ...
  http://pubmedcentralcanada.ca/pmcc/articles/PMC3285761/?lang=en-ca
*  Cancers | Free Full-Text | BRCA1 and Oxidative Stress | HTML
... induces GADD45α transcription through interaction with transcription factors such as the octamer-binding transcription factor-1 ... Table 1. Transcription factors that bind to BRCA1.. Transcription factor. Region in BRCA1 (aa). Assays. References. ... BRCA1 also modulates transcriptional activity of diverse transcription factors including the activating transcription factor 1 ... BRCA1 augments transcription by the NF-κB transcription factor by binding to the Rel domain of the p65/RelA subunit. J. Biol. ...
  http://www.mdpi.com/2072-6694/6/2/771/htm
*  The PBAP remodeling complex is required for histone H3.3 replacement at chromatin boundaries and for boundary functions |...
2001). Dual functions of largest NURF subunit NURF301 in nucleosome sliding and transcription factor interactions. Mol. Cell 8 ... 1999). Histone octamer transfer by a chromatin-remodeling complex. Cell 96, 389-392. ... This means that at least two GAGA factor-binding sites, one for the GAGA factor-FACT complex and the other for the GAGA factor- ... it is most likely that GAGA factor-FACT, GAGA factor-PBAP and GAGA factor-HIRA are distinct complexes. ...
  http://dev.biologists.org/content/139/24/4582
*  Frontiers | Mechanisms underlying the tissue-specific and regulated activity of the Gnrhr promoter in mammals | Endocrinology
Octamer-binding transcription factor 1 (OCT1, formally POU2F1) belongs to the other members of homeodomain transcription ... transcription factors might be involved in tissue-specific promoter activity. b/HLH transcription factors (124 in numbers in ... Homeobox transcription factors. Several homeobox factors further participate in the combinatorial code that directs gonadotrope ... Subsequent study considering E-box transcription factors has demonstrated the involvement of two other b/HLH transcription ...
  https://www.frontiersin.org/articles/10.3389/fendo.2012.00162/full
*  Epigenetics in stem-cell differentiation - Wikipedia
"A novel octamer binding transcription factor is differentially expressed in mouse embryonic cells". Cell. 60: 461-472. doi: ... DNA methylation can modulate the binding affinities of transcription factors by recruiting repressors such as MeCP2 which ... Leukemia inhibitory factor (LIF) was removed from all the cell lines. LIF inhibits cell differentiation, and its removal allows ... Differentiation was triggered by the removal of Leukemia inhibitory factor (LIF) which inhibits differentiation. Representative ...
  https://en.wikipedia.org/wiki/Epigenetics_in_stem-cell_differentiation
*  Microbiology Society Journals | Functional interaction of Oct transcription factors with the family of repeats in Epstein-Barr...
Here, it was shown that Cp could also be activated by octamer-binding factor (Oct) proteins. Physical binding to the FR by the ... cellular transcription factors Oct-1 and Oct-2 was demonstrated by using an electrophoretic mobility-shift assay. Furthermore, ... that controls transcription of six different latent nuclear proteins following interaction with the EBV nuclear protein EBNA1. ... Oct-1 in combination with co-regulator Bob.1, or Oct-2 alone, could drive transcription of a heterologous thymidine kinase ...
  http://jgv.microbiologyresearch.org/content/journal/jgv/10.1099/vir.0.80620-0
*  Daniel Tenen | Harvard Catalyst Profiles | Harvard Catalyst
The macrophage transcription factor PU.1 directs tissue-specific expression of the macrophage colony-stimulating factor ... Octamer binding factors and their coactivator can activate the murine PU.1 (spi-1) promoter. J Biol Chem. 1996 Jun 28; 271(26): ... Role of transcription factors C/EBPalpha and PU.1 in normal hematopoiesis and leukemia. Int J Hematol. 2005 Jun; 81(5):368-77. ... Absence of the transcription factor CCAAT enhancer binding protein alpha results in loss of myeloid identity in bcr/abl-induced ...
  https://connects.catalyst.harvard.edu/Profiles/display/Person/63164
*  A role for methyl-CpG binding domain protein 2 in olfactory neuronal development - UBC Library Open Collections
The majority of transcription factors require contact with cytosine residues; however, transcription factors are known that can ... Guschin D, Wade PA, Kikyo N, Wolffe AP (2000) ATP-Dependent histone octamer mobilization and histone deacetylation mediated by ... In the direct mechanism (Fig 4B), DNA methylation prevents transcription by excluding transcription factors that contact ... In the direct mechanism, DNA methylation prevents transcription by excluding transcription factors, the majority of which ...
  https://open.library.ubc.ca/cIRcle/collections/ubctheses/831/items/1.0090094
*  IJMS | Free Full-Text | Tailoring the Models of Transcription | HTML
... as well as transcription factors in order to examine their function. The understanding of promoter complexity and transcription ... Transcription is the first step in protein expression and the major point of regulation of the components that determine the ... on some of the many applications of molecular cut-and-paste tools for the manipulation of promoters and transcription factors ... study of transcriptional regulation has been greatly facilitated by the development of reporter genes and transcription factor ...
  http://mdpi.com/1422-0067/14/4/7583/htm