Loading...


*  free sequence homology search on WWW
... Juergen Brosius RNA.world at uni-muenster.de Sun Mar 31 03:53:13 EST 1996 *Previous ... Please call it sequence SIMILARITY In a search you may find many sequence similarities but only few of the matches may ... 1987) Homology in proteins and nucleic acids: A terminology muddle and a way out of it. Cell 60, 667 *Previous message: free ...
  http://www.bio.net/bionet/mm/bioforum/1996-March/019073.html
*  'sequence homology' Protocols and Video...
... sequence homology' include 'Genetic Manipulation in Δku80 Strains for Functional Genomic Analysis of Toxoplasma gondii', ' ... Using RNA-sequencing to Detect Novel Splice Variants Related to Drug Resistance in In Vitro Cancer Models', 'Identification of ... Identification of Rare Bacterial Pathogens by 16S rRNA Gene Sequencing and MALDI-TOF MS', 'Targeted in Situ Mutagenesis of ... Sequencing Metagenomes and Metatranscriptomes from Complex Animal-associated Samples', 'Quantitation and Analysis of the ...
  https://www.jove.com/keyword/sequence+homology
*  Bovine : Sequence Homology, Antibody Reactivity | Cell Signaling
Visit CellSignal.com to view our Bovine materials including Sequence Homology, Antibody Reactivity & more. CST - Customer ...
  https://www.cellsignal.com/browse/bovine?N=4294960399+4294956287
*  Amino Acid Sequence Homology - Medical Dictionary online-medical-dictionary.org
Amino Acid Sequence Homology. The degree of similarity between sequences of Amino Acids. This information is useful for the ...
  http://www.online-medical-dictionary.org/definitions-a/amino-acid-sequence-homology.html
*  Sequence homology - Wikipedia
Sequence homology is the biological homology between protein or DNA sequences, defined in terms of shared ancestry in the ... Alignments of multiple sequences are used to indicate which regions of each sequence are homologous. The term "percent homology ... "quantify the homology". Based on the definition of homology specified above this terminology is incorrect since sequence ... Partial homology can occur where a segment of the compared sequences has a shared origin, while the rest does not. Such partial ...
  https://en.wikipedia.org/wiki/Sequence_homology
*  Sequence homology between certain viral proteins and proteins related to encephalomyelitis and neuritis | Science
Sequence homology between certain viral proteins and proteins related to encephalomyelitis and neuritis ... Sequence homology between certain viral proteins and proteins related to encephalomyelitis and neuritis ... Sequence homology between certain viral proteins and proteins related to encephalomyelitis and neuritis ... Sequence homology between certain viral proteins and proteins related to encephalomyelitis and neuritis ...
  http://science.sciencemag.org/content/229/4710/282
*  Relationship Between Sequence Homology, Genome Architecture, and Meiotic Behavior of the Sex Chromosomes in North American...
In contrast, homology is concentrated in high complexity, and presumably euchromatic, sequence on the X and Y chromosomes of ... Relationship Between Sequence Homology, Genome Architecture, and Meiotic Behavior of the Sex Chromosomes in North American ... Relationship Between Sequence Homology, Genome Architecture, and Meiotic Behavior of the Sex Chromosomes in North American ... Relationship Between Sequence Homology, Genome Architecture, and Meiotic Behavior of the Sex Chromosomes in North American ...
  http://www.genetics.org/content/210/1/83
*  Model for the phycobilisome rod with interlocking disks based on domain-weighted linker-polypeptide sequence homologies of...
Model for the phycobilisome rod with interlocking disks based on domain-weighted linker-polypeptide sequence homologies of ... "Model for the phycobilisome rod with interlocking disks based on domain-weighted linker-polypeptide sequence homologies of ...
  https://www.hindawi.com/journals/ijp/2000/724545/cta/
*  Human prostatic acid phosphatase: cDNA cloning, gene mapping and protein sequence homology with lysosomal acid phosphatase
Molecular Sequence Data, Nucleic Acid Hybridization, Prostate/*enzymology, RNA, Messenger/genetics, Sequence Homology, Nucleic ... Molecular Sequence Data,Nucleic Acid Hybridization,Prostate/*enzymology,RNA,Messenger/genetics,Sequence Homology,Nucleic Acid ... Human prostatic acid phosphatase: cDNA cloning, gene mapping and protein sequence homology with lysosomal acid phosphatase. ... Human prostatic and lysosomal acid phosphatases exhibit 50% sequence homology, including five Cys residues and two putative N- ...
  https://lup.lub.lu.se/search/publication/65094a41-c096-4c63-9e5a-f3d6d589f7b3
*  The American Journal of Tropical Medicine and Hygiene | Repeated Immunogenic Amino Acid Sequences of Plasmodium Species Share...
By reducing homologies of such peptide vaccines to host proteins, the possibility of autoimmune complications may be reduced, ... amino acid sequences between tandemly repeated Plasmodium amino acid sequences and the human and human viral sequences compiled ... Matches of at least 4 amino acids were found for all sequences. In the database, 29 matches were found for human proteins and ... Six published repetitive immunogenic amino acid sequences from the circumsporozoite (CS) antigen, ring-infected erythrocyte ...
  http://www.ajtmh.org/content/journals/10.4269/ajtmh.1987.37.258
*  An Introduction to Sequence Similarity ("Homology") Searching
homology, sequence alignment, paralogy, multiple alignment, sequence similarity, sequence evolution, orthlogy Disciplines:. * ... An Introduction to Sequence Similarity ("Homology") Searching Sequence similarity searching, typically with BLAST (units 3.3, ... An Introduction to Sequence Similarity ("Homology") Searching is categorized in the following disciplines: * Science and ... If you know the author of An Introduction to Sequence Similarity ("Homology") Searching, please help us out by filling out the ...
  https://www.merlot.org/merlot/viewMaterial.htm?id=901816
*  A Mechanism for RecA-Promoted Sequence Homology Recognition and Strand Exchange Between Single-Stranded DNA and Duplex DNA,...
p>A central function of RecA protein during homologous recombination is to promote sequence recognition and strand exchange ... A Mechanism for RecA-Promoted Sequence Homology Recognition and Strand Exchange Between Single-Stranded DNA and Duplex DNA, via ... Preliminary calculations suggest that sequence homology recognition within the triplex of association is partial and that it is ... A central function of RecA protein during homologous recombination is to promote sequence recognition and strand exchange ...
  http://www.jbsdonline.com/a-mechanism-reca-promoted-sequence-homology-recognition-and-strand-exchange-between-single-stranded-dna-and-duplex-dna-via-triple-helical-intermediates-p10048.html
*  Predicting mutually exclusive spliced exons based on exon length, splice site and reading frame conservation, and exon sequence...
Search for non-mutually exclusive exons sharing similar length, same reading frame, and sequence homology. It could well be ... False negatives are those exons that do not meet the preconditions of similar length and sequence homology. However, if those ... The query exon and the candidate exon have identical lengths and show strong homology. Based on the multiple sequence alignment ... In total, 94 exons of similar length, same splice sites and reading frames, and sequence homology have been identified by ...
  https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-12-270
*  Sequence Similarity - 1F5X: NMR STRUCTURE OF THE Y174 AUTOINHIBITED DBL HOMOLOGY DOMAIN Sequence Similarity Report...
Structural basis for relief of autoinhibition of the Dbl homology domain of proto-oncogene Vav by tyrosine phosphorylation. ... Structures of protein chains with identical sequences (sequence identity > 95%) are aligned, superimposed and clustered. ... Sequence Similarity Clusters for the Entities in PDB 1F5X Legend Entity #1 , Chains: A RHO-GEF VAV protein, length: 208 (BLAST ... Blast this sequence against all of PDB Archive.. Rank. In each cluster, the chains are sorted (i.e. ranked) according to the ...
  http://www.rcsb.org/pdb/explore/sequenceCluster.do?structureId=1F5X
*  Human prostatic acid phosphatase: cDNA cloning, gene mapping and protein sequence homology with lysosomal acid phosphatase. -...
Human prostatic and lysosomal acid phosphatases exhibit 50% sequence homology, including five Cys residues and two putative N- ... The complete sequence of 354 amino acids for the mature enzyme was determined by sequencing both cDNA and protein. ... A dimer and a monomer of the conserved Alu-repeats are present in the longer 3' noncoding sequences. ... Human prostatic acid phosphatase: cDNA cloning, gene mapping and protein sequence homology with lysosomal acid phosphatase.. * ...
  https://www.semanticscholar.org/paper/Human-prostatic-acid-phosphatase-cDNA-cloning-gene-Sharief-Lee/be9566abd89d895d6cf7d92a5751e45623bd4989
*  OPUS at UTS: Discovery of an MIT-like atracotoxin family: spider venom peptides that share sequences homology but not...
These peptides all show significant amino acid sequence homology to atracotoxin-Hvf17 (ACTX-Hvf17), a non-toxic peptide ... These peptides all show significant amino acid sequence homology to atracotoxin-Hvf17 (ACTX-Hvf17), a non-toxic peptide ... Discovery of an MIT-like atracotoxin family: spider venom peptides that share sequences homology but not pharmacological ... Discovery of an MIT-like atracotoxin family: spider venom peptides that share sequences homology but not pharmacological ...
  https://opus.lib.uts.edu.au/handle/10453/593
*  Sequence Similarity - 1AWE: HUMAN SOS1 PLECKSTRIN HOMOLOGY (PH) DOMAIN, NMR, 20 STRUCTURES Sequence Similarity Report...
A possible structural role for the sequential association of diffuse B cell lymphoma and pleckstrin homology domains. ... The solution structure of the pleckstrin homology domain of human SOS1. ... Structures of protein chains with identical sequences (sequence identity > 95%) are aligned, superimposed and clustered. ... Sequence Similarity Clusters for the Entities in PDB 1AWE Legend Entity #1 , Chains: A SOS1 protein, length: 130 (BLAST) ...
  http://www.rcsb.org/pdb/explore/sequenceCluster.do?structureId=1AWE
*  Plus it
Sequence Homology Search.. CTT homologues were searched with BLASTP 1.4.11 MP, using strategy (identity matrix, word size one, ... The third peptide was the CTT homologue CLP, found by sequence homology search from SWISS-PROT and EMBL databases by Blast 1.4. ... Furthermore, the CTT sequence does not resemble known cell-binding sequences of laminin (51) . On the other hand, the fact that ... Our query sequence was CXXHWGFTXC. Nine analogues were found, among them a part of the EGF-7 domain in human laminin β-1 chain ...
  http://cancerres.aacrjournals.org/content/61/10/3978
*  IJMS | Free Full-Text | Transcriptomic Analysis in Diabetic Nephropathy of Streptozotocin-Induced Diabetic Rats | HTML
Analysis of Sequence Homology of EST's. EST's, based on their differential expression pattern, were selected and sequenced. The ... The products were sequenced and subject to homology search by using BLAST program at the web site of National Center of ... Although several EST's showed homology with genes whose function could suggest a possible role in the pathogenesis of DN, ... As aforementioned, based on hybridization signals, 160 EST's were selected for sequencing, from which 72 were down- and 88 over ...
  http://www.mdpi.com/1422-0067/12/12/8431/htm
*  Frontiers | Biochemical and Expression Analyses of the Rice Cinnamoyl-CoA Reductase Gene Family | Plant Science
Phylogenetic tree and sequence similarities suggested OsCCR4, 5, 17, 18, 19, 20, and 21 as likely candidates for functional ... Phylogenetic tree and sequence similarities suggested OsCCR4, 5, 17, 18, 19, 20, and 21 as likely candidates for functional ... Sequence Homology and Phylogenetic Analysis of OsCCRs. Multiple aignments of CCR protein sequences revealed that OsCCR1-25 had ... The most striking homology between the predicted peptide sequences of OsCCRs and functional CCRs was found in regions covered ...
  https://www.frontiersin.org/articles/10.3389/fpls.2017.02099/full
*  IUCr) Enzyme-adenylate structure of a bacterial ATP-dependent DNA ligase with a minimized DNA-binding surface
Sequence homology is based on the full-length amino-acid sequences of ChlV-Lig and T7-Lig and the ligase domain of Mtu-Lig ( ... Sequence homology (E-value). Length. R.m.s.d. (Å). Aligned SSEs. Z-score. Length. R.m.s.d. (Å). Aligned SSEs. Z-score. ... and homology searches against the nonredundant protein sequences database. SignalP 4.1 (Gram-negatives networks setting, D ... Sequence homology with other putatively periplasmic, minimal-type bacterial ADLs suggests that the lack of loop regions could ...
  http://journals.iucr.org/d/issues/2014/11/00/rr5081/index.html
*  Experimental assessment of pro-lymphangiogenic growth factors in the treatment of post-surgical lymphedema following...
Sequence homologies. It was necessary to determine whether the growth factors released from HAMC remained bioactive, that is, ... homology (HomoloGene, NCBI). The receptors for each of these ligands share similar homologies at 86.8% for VEGFR-3 (between ... Owing to close homology between both bovine and ovine ligands and receptors, these results suggest that similar results would ... The growth factors employed in this study are human derived and thus share only partial homology with those of sheep. ...
  https://breast-cancer-research.biomedcentral.com/articles/10.1186/bcr2638
*  Sequence Similarity - 1BMX: HIV-1 CAPSID PROTEIN MAJOR HOMOLOGY REGION PEPTIDE ANALOG, NMR, 8 STRUCTURES Sequence...
... capsid protein major-homology-region peptide analogs by NMR spectroscopy. ... Structures of protein chains with identical sequences (sequence identity > 95%) are aligned, superimposed and clustered. ... Sequence Similarity Clusters for the Entities in PDB 1BMX Legend Entity #1 , Chains: A HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 ... Blast this sequence against all of PDB Archive.. Rank. In each cluster, the chains are sorted (i.e. ranked) according to the ...
  http://www.rcsb.org/pdb/explore/sequenceCluster.do?structureId=1BMX
*  The Role of Two F-Box Proteins, SLEEPY1 and SNEEZY, in Arabidopsis Gibberellin Signaling | Plant Physiology
Sequence Homology of SLY1 and SNE/SLY2. The homology of SLY1 to SNE is diagrammed in Figure 1 at both the level of mRNA and ... Domain structure and homology of the SLY1 and SNE genes and predicted protein sequences. A, Gene structure of two F-box ... amino acid sequence homology. The N-terminal domains before the F-box domain (SLY1, amino acids 1-32; SNE, 1-24) have 55.4% DNA ... amino acid homology; the F-box domain itself (SLY1, amino acids 32-77; SNE, 25-72) has 55.0% DNA/26.8% amino acid homology; and ...
  http://www.plantphysiol.org/content/155/2/765?ijkey=c6be75d3c98b378e78070a4a600ab36a49376b02&keytype2=tf_ipsecsha
*  Dihydrofolate Reductase: Partial Sequence of the Lactobacillus casei Enzyme and Homology with other Dihydrofolate Reductases |...
Dihydrofolate Reductase: Partial Sequence of the Lactobacillus casei Enzyme and Homology with other Dihydrofolate Reductases. ... Dihydrofolate Reductase: Partial Sequence of the Lactobacillus casei Enzyme and Homology with other Dihydrofolate Reductases ... Dihydrofolate Reductase: Partial Sequence of the Lactobacillus casei Enzyme and Homology with other Dihydrofolate Reductases ... Dihydrofolate Reductase: Partial Sequence of the Lactobacillus casei Enzyme and Homology with other Dihydrofolate Reductases ...
  http://www.biochemsoctrans.org/content/5/4/1097