16S ribosomal RNA - Wikipedia
16S ribosomal RNA (or 16S rRNA) is the RNA component of the 30S subunit of a prokaryotic ribosome (SSU rRNA). It binds to the ... Multiple sequences of the 16S rRNA gene can exist within a single bacterium. Like the large (23S) ribosomal RNA, it has a ... Chakravorty S, Helb D, Burday M, Connell N, Alland D (May 2007). "A detailed analysis of 16S ribosomal RNA gene segments for ... Czernilofsky AP, Kurland CG, Stöffler G (October 1975). "30S ribosomal proteins associated with the 3-terminus of 16S RNA". ...
PRIME PubMed | Structural characterization of Escherichia coli ribosomal protein S8 and its binding site in 16S ribosomal RNA
Structural characterization of Escherichia coli ribosomal protein S8 and its binding site in 16S ribosomal RNA. Download Prime ... "Structural Characterization of Escherichia Coli Ribosomal Protein S8 and Its Binding Site in 16S Ribosomal RNA." Nucleic Acids ... Structural characterization of Escherichia coli ribosomal protein S8 and its binding site in 16S ribosomal RNA. Nucleic Acids ... Structural Characterization of Escherichia Coli Ribosomal Protein S8 and Its Binding Site in 16S Ribosomal RNA. Nucleic Acids ...
16S ribosomal RNA | DrugBank Online
Psychrobacter faecalis 16S ribosomal RNA | URS00000C48F1
This rRNA sequence is 1,466 nucleotides long and is found in Psychrobacter faecalis. Annotated by 3 databases (ENA, RefSeq, SILVA). Has a conserved secondary structure or a structured region. Matches 1 Rfam family (SSU_rRNA_bacteria, RF00177).
Sphingopyxis terrae 16S ribosomal RNA | URS00000199A1
This rRNA sequence is 1,386 nucleotides long and is found in Sphingopyxis terrae. Annotated by 3 databases (SILVA, ENA, RefSeq). Has a conserved secondary structure or a structured region. Matches 1 Rfam family (SSU_rRNA_bacteria, RF00177).
16S ribosomal RNA | Digital World Biology
Bacteria 16S ribosomal RNA gene, partial sequence. - PopSet - NCBI
Bacteria 16S ribosomal RNA gene, partial sequence. Bacteria 16S ribosomal RNA gene, partial sequence.. PopSet: 459652754 ... KC140346.1Actinobacterium BAL412 16S ribosomal RNA gene, partial sequence. *KC140345.1Actinobacterium BAL411 16S ribosomal RNA ... KC140348.1Actinobacterium BAL414 16S ribosomal RNA gene, partial sequence. *KC140347.1Alpha proteobacterium BAL413 16S ... KC140351.1Alpha proteobacterium BAL417 16S ribosomal RNA gene, partial sequence. *KC140350.1Alpha proteobacterium BAL416 16S ...
Gammaproteobacteria 16S ribosomal RNA gene, partial sequence. - PopSet - NCBI
SN10-2M 16S ribosomal RNA gene, partial sequence. *GU226326.1Actinobacillus pleuropneumoniae strain 17/06L 16S ribosomal RNA ... Gammaproteobacteria 16S ribosomal RNA gene, partial sequence. Gammaproteobacteria 16S ribosomal RNA gene, partial sequence. ... GU226324.1Actinobacillus minor strain 22095 16S ribosomal RNA gene, partial sequence. *GU226323.1Actinobacillus porcinus strain ... 82/05-3 16S ribosomal RNA gene, partial sequence. *GU226322.1Actinobacillus porcinus strain N148/05CP-6W 16S ribosomal RNA gene ...
Frontiers | Gut microbiota display alternative profiles in patients with early-onset colorectal cancer
The diversity of their fecal bacteria was explored using 16S ribosomal RNA gene sequencing. Cluster of ortholog genes (COG) ... The diversity of their fecal bacteria was explored using 16S ribosomal RNA gene sequencing. Cluster of ortholog genes (COG) ... 16S ribosomal RNA gene sequencing. Microbial DNA was extracted from fecal samples using the E.Z.N.A. @ Soil DNA Kit (Omega Bio- ... The diversity of their fecal bacteria was explored using 16S ribosomal RNA gene sequencing. Cluster of ortholog genes (COG) ...
Detection and phylogenetic analysis of novel crenarchaeote and euryarchaeote 16S ribosomal RNA gene sequences from a Great...
JCM | Free Full-Text | Efficacy of AI-Assisted Personalized Microbiome Modulation by Diet in Functional Constipation: A...
Fecal Sampling and 16S Ribosomal RNA Gene Sequencing. Fecal samples were collected using BBL culture swabs (Becton, Dickinson ... The sequencing of 16S rRNA was performed using the Illumina MiSeq (Illumina, San Diego, CA, USA) device according to the ... In another pivotal cross-sectional study conducted on children with constipation using 16S rRNA gene pyrosequencing, it was ... and Company, Sparks, MD, USA) and transported to the laboratory in a DNA/RNA shield buffer medium. DNA extraction was carried ...
Frontiers | Compartmentalization of Immune Response and Microbial Translocation in Decompensated Cirrhosis
In a subset of 10 representative patients, bacterial DNA was extracted from ascites and whole blood, followed by 16S rRNA gene ... In a subset of 10 representative patients, bacterial DNA was extracted from ascites and whole blood, followed by 16S rRNA gene ... 16S Ribosomal RNA Gene Sequencing. For extraction of total DNA, 100 μl of whole blood or ascitic fluid were used. Samples were ... The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Res. (2013) 41:D590- ...
Use of 16S ribosomal RNA probes for the detection of marine bacteria
... Rehnstam-Holm, Ann-Sofi Department of Microbiology, Umeå ... 1. Identification of Vibrio anguillarum in fish by using partial 16S rRNA sequences and a specific 16S rRNA oligonucleotide ... Identification of Vibrio anguillarum in fish by using partial 16S rRNA sequences and a specific 16S rRNA oligonucleotide probe ... 16S rRNA from seven different Vibrio anguillarum strains was partially sequenced and compared. From this sequence information ...
Sequence Analysis of Specific Areas of the 16S and 23S Ribosomal RNAs - Wikidata
The chemical structure of bacterial ribosomal RNA. I. Terminal nucleotide sequences of Escherichia coli ribosomal RNA ... The terminal groups of ribonucleate chains in each of the 16S and 23S components of Escherichia coli ribosomal RNA ... Sequence Analysis of Specific Areas of the 16S and 23S Ribosomal RNAs. scientific article published in Nature ... Sequence analysis of specific areas of the 16S and 23S ribosomal RNAs (English) ...
1I6U: Rna-Protein Interactions: The Crystal Structure Of Ribosomal Protein S8RRNA COMPLEX FROM METHANOCOCCUS Jannaschii
Randomised clinical trial: gut microbiome biomarkers are associated with clinical response to a low FODMAP diet in children...
Genetic markers for rapid PCR-based identification of gull, Canada goose, duck, and chicken fecal contamination in water
We used subtractive hybridization of PCR-amplified gull fecal 16S RNA ge … ... RNA, Ribosomal, 16S / genetics * Sensitivity and Specificity * Sequence Analysis, DNA * Water Microbiology* ... We used subtractive hybridization of PCR-amplified gull fecal 16S RNA genes to identify avian-specific fecal rRNA gene ...
Homo sapiens
16S Ribosomal RNA; EXT_SOURCE=Gutell Lab CRW Site; EXT_ID=d.16.b.M.leprae.GEN; ORGANISM=NULL ... 16S Ribosomal RNA; EXT_SOURCE=Gutell Lab CRW Site; EXT_ID=d.16.b.S.aureus.GEN; ORGANISM=NULL ... 16S Ribosomal RNA; EXT_SOURCE=Gutell Lab CRW Site; EXT_ID=b.16.m.C.parallelus.ESC; ORGANISM=NULL ... 16S Ribosomal RNA; EXT_SOURCE=Gutell Lab CRW Site; EXT_ID=d.16.e.N.bombycis.02; ORGANISM=NULL ...
Changes in human gut microbiota composition are linked to the energy metabolic switch during 10 d of Buchinger fasting
RNA, Ribosomal, 16S / genetics * Time Factors * Tumor Necrosis Factor-alpha / metabolism * Young Adult ... Faecal 16S rRNA gene amplicon sequencing showed that fasting caused a decrease in the abundance of bacteria known to degrade ...
Use of 16S ribosomal RNA gene analyses to characterize the bacterial signature associated with poor oral health in West...
Use of 16S ribosomal RNA gene analyses to characterize the bacterial signature associated with poor oral health in West ... "Use of 16S ribosomal RNA gene analyses to characterize the bacterial signature associated with poor oral health in West ... Use of 16S ribosomal RNA gene analyses to characterize the bacterial signature associated with poor oral health in West ... "Use of 16S ribosomal RNA gene analyses to characterize the bacterial signature associated with poor oral health in West ...
TAP and LB liquid cultures of the bacterial strain LMJ (Bacterium strain clone LIB091 C05 1243 variant 16S ribosomal RNA;...
1243 variant 16S ribosomal RNA; GenBank Accession # MN633292.1) grown for 4 days and Gram stains of LMJ from these liquid ... growth in liquid LB with shakingbacterial strain LMJ (Bacterium strain clone LIB091_C05_1243 variant 16S ribosomal RNA; GenBank ... TAP and LB liquid cultures of the bacterial strain LMJ (Bacterium strain clone LIB091_C05_1243 variant 16S ribosomal RNA; ...
African Journal of Microbiology Research - analysis of 16s ribosomal rna gene segments for the diagnosis of gram negative...
We characterized V6 and V1 to V6 regions of 16S-rRNA gene in 20 Pseudomonas, 15 Escherichia and 15& ... We characterized V6 and V1 to V6 regions of 16S-rRNA gene in 20 Pseudomonas, 15 Escherichia and 15& ... nbsp; Key words: Gram negative bacteria, urinary tract infections, 16S-rRNA gene, sequencing ... nbsp; Key words: Gram negative bacteria, urinary tract infections, 16S-rRNA gene, sequencing ...
Monika Proszkowiec-Weglarz : USDA ARS
Choice of 16S ribosomal RNA primers affects the microbiome analysis - (Peer Reviewed Journal) ... Choice of 16S ribosomal RNA primers affects the microbiome analysis. Scientific Reports. https://doi.org/10.1038/s41598-021- ... Metagenomic analysis of 16S Clostridium perfringens amplicons corroborates C. perfringens counts on select agar and C. ... Metagenomic analysis of 16S Clostridium perfringens amplicons corroborates C. perfringens counts on select agar and C. ...
Helicobacter mustelae (Fox et al.) Goodwin et al. - 43772 | ATCC
Streptococcus constellatus subsp. constellatus (Prevot) Holdeman and Moore - 27823 | ATCC
Kirstine Kobberøe Søgaard - Publikationer - Aalborg Universitets forskningsportal
WTS database | WHO FCTC
LR: 20081121; JID: 8412849; 0 (DNA, Ribosomal); 0 (RNA, Ribosomal, 16S); 2007/04/17 [received]; 2007/11/30 [revised]; 2007/12/ ... RNA, Ribosomal, 16S/analysis, Random Amplified Polymorphic DNA Technique/methods, Sequence Analysis, DNA, Soy Foods/ ... The 16S rDNA sequences of 9 strains (6 from brine A and 3 from brine C) showed low values of similarity (below 98%) with ... DNA, Ribosomal/chemistry/genetics, Fermentation, Gene Amplification, Genetic Variation, Hydrogen-Ion Concentration, ...
Overview: H045 r24225, Pseudomonas poae RE 1-1-14
Single mutation makes Escherichia coli an insect mutualist | Nature Microbiology
The number of total bacterial genome copies was evaluated based on bacterial 16S ribosomal RNA gene copies. When the former E. ... For the subsequent RNA sequencing (RNA-seq) analyses and resequencing of E. coli genomes, the symbiotic organs were isolated ... RNA-seq analyses. The homogenate of the symbiotic organ was subjected to total RNA extraction using RNAiso (Takara Bio) and the ... and 16S-1046R (5′-CGACAGCCATGCANCACCT-3′) were used for the bacterial 16S rRNA gene. The PCR reaction was performed using the ...