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Modular assembly of synthetic proteins that span the plasma membrane in mammalian cells | BMC Biotechnology | Full Text
... the signal peptidase cleavage site enhanced sorting out of the ER.. Fig. 1 A signal peptidase cleavage site enhances sorting ... A signal peptidase cleavage site enhances sorting out of the ER. While an N-terminal TM traffics the protein to the ER, an ... 1c-e). To enhance sorting out of the ER, the protein named TLP-Venus was created as the tandem fusion of TM, the signal ... Signals for sorting of transmembrane proteins to endosomes and lysosomes. Annu Rev Biochem. 2003;72:395-447. doi:10.1146/ ...https://bmcbiotechnol.biomedcentral.com/articles/10.1186/s12896-016-0320-7
Browsing IBERS Research papers by Author "Kaderbhai, Naheed N."
A procedure is described for measuring Escherichia coli signal peptidase I activity which exploits an intact precursor protein ... Sort by: title. issue date. submit date. Order: ascending. descending. Results: 5. 10. 20. 40. 60. 80. 100. ... An anti-microbial peptide derivative of flesh fruit fly mimics secretory signal sequence and inhibits signal peptidase-I in the ... random peptide sequences for appendage at the secretory signal peptide-mature protein junction to seek ideal algorithms for ...http://cadair.aber.ac.uk/dspace/handle/2160/1336/browse?value=Kaderbhai%2C+Naheed+N.&type=author
32nd week of 2011 patent applcation highlights part 36
USE OF A PROTEIN KINASE INHIBITOR TO DETECT IMMUNE CELLS, SUCH AS T CELLS - The invention relates to a method for sorting, ... said recombinant protein comprising a peptide signal according to the present invention; growing the transfected cell; and ... a modified protein thereof; and use of the protein or the modified protein. The protein of the present invention is, for ... PROTEIN, AND USE OF THE PROTEIN OR THE MODIFIED PROTEIN - The present invention provides: a protein having a fructosyl amino ...http://www.patentsencyclopedia.com/hgl/08-11-11/08-11-11_36
The presence of an ER exit signal determines the protein sorting upon ER exit in yeast | Biochemical Journal
We attempted to identify sorting determinants for this protein sorting event in the ER. We found that mutant Gas1 proteins that ... The presence of an ER exit signal determines the protein sorting upon ER exit in yeast. Reika Watanabe, Guillaume A. Castillon ... The presence of an ER exit signal determines the protein sorting upon ER exit in yeast ... The presence of an ER exit signal determines the protein sorting upon ER exit in yeast ...http://www.biochemj.org/content/414/2/237
Mitochondrial protein import in plants - Signals, Sorting, Targeting, Processing and Regulation, Plant Molecular Biology | 10...
Signals, Sorting, Targeting, Processing and Regulation, Plant Molecular Biology" on DeepDyve, the largest online rental service ... processing peptidase, protein processing, protein sorting, regulation of protein import, signal peptides ... Signals, Sorting, Targeting, Processing and Regulation. Mitochondrial protein import in plants - Signals, Sorting, Targeting, ... of targeting peptides, sorting of precursor proteins between mitochondria and chloroplasts, signal recognition, ...https://www.deepdyve.com/lp/springer_journal/mitochondrial-protein-import-in-plants-signals-sorting-targeting-O4WQKiGejF
Structure of the TatC core of the twin-arginine protein transport system.
... pathway is one of two general protein transport systems found in the prokaryotic cytoplasmic membrane and is conserved in the ... Membrane Transport Proteins / chemistry*, metabolism. Models, Molecular*. Protein Binding. Protein Sorting Signals. Protein ... TatC captures substrate proteins by binding their signal peptides. TatC then recruits TatA family proteins to form the active ... The defining, and highly unusual, property of the Tat pathway is that it transports folded proteins, a task that must be ...http://www.biomedsearch.com/nih/Structure-TatC-core-twin-arginine/23201679.html
Characterization of the transport signals that mediate the nucleocytoplasmic traffic of low risk HPV11 E7. - NextBio article
Papillomavirus E7 Proteins Protein Sorting Signals Receptors, Cytoplasmic and Nuclear exportin 1 protein nuclear pore protein ... Nuclear Pore Complex Proteins Papillomavirus E7 Proteins Protein Sorting Signals Receptors, Cytoplasmic and Nuclear ... Overall the data support a model of nuclear entry of HPV11 E7 protein via hydrophobic interactions with FG nucleoporins at the ... Characterization of the transport signals that mediate the nucleocytoplasmic traffic of low risk HPV11 E7. Courtney H McKee, ...http://www.nextbio.com/b/search/article.nb?id=23725695
Nonsense Codon - Nonsense Mutation Summary Report | CureHunter
Its occurance is abnormal causing premature termination of protein translation and results in production of truncated and non- ... functional proteins. A nonsense mutation is one that converts an amino acid-specific codon to a stop codon. ... Protein Sorting Signals (Signal Peptide) 5. Adenosine 6. Incretins 7. Tobramycin (Nebcin) ... Its occurance is abnormal causing premature termination of protein translation and results in production of truncated and non- ...http://www.curehunter.com/public/keywordSummaryD018389-Nonsense-Codon-Nonsense-Mutation.do
IJMS | Free Full-Text | Characterization of a Gene Encoding Clathrin Heavy Chain in Maize Up-Regulated by Salicylic Acid,...
The high similarities of gene structure, protein sequences and 3D models among ZmCHC1, and Arabidopsis AtCHC1 and AtCHC2 ... suggesting that ZmCHC1 gene may be involved in the SA signaling pathway in maize defense responses. The expressions of ZmCHC1 ... and ZmCHC2 encodes a 1746-amino acid-protein including 28 exons and 27 introns. ... ZmCHC1 encodes a 1693-amino acid-protein including 29 exons and 28 introns, ...http://www.mdpi.com/1422-0067/14/7/15179/htm
Nine 3-ketoacyl-CoA thiolases (KATs) and acetoacetyl-CoA thiolases (ACATs) encoded by five genes in Arabidopsis thaliana are...
Extensive feature detection of N-terminal protein sorting signals. Bannai, H; Tamada, Y; Maruyama, O; Nakai, K; Miyano, S ... Import of the peroxisomal targeting signal type 2 protein 3-ketoacyl-coenzyme a thiolase into glyoxysomes ... Just read the message: a model for sorting of proteins between mitochondria and chloroplasts ... Protein import into plant mitochondria: precursor proteins differ in ATP and membrane potential requirements ...https://www.deepdyve.com/lp/springer_journal/nine-3-ketoacyl-coa-thiolases-kats-and-acetoacetyl-coa-thiolases-acats-CQU74ee4Bx
Ordered Assembly of Mitochondria During Rice Germination Begins with Promitochondrial Structures Rich in Components of the...
Assembly of Mitochondria During Rice Germination Begins with Promitochondrial Structures Rich in Components of the Protein ... Extensive feature detection of N-terminal protein sorting signals. Bannai, H.; Tamada, Y.; Maruyama, O.; Nakai, K.; Miyano, S. ... Proteins representing components of the mitochondrial protein import apparatus are strikingly abundant in dry seeds, and a ... Molecular biology of chloroplast biogenesis: Gene expression, protein import and intraorganellar sorting ...https://www.deepdyve.com/lp/springer_journal/ordered-assembly-of-mitochondria-during-rice-germination-begins-with-ShjZbPkRTc
Subcellular localization of rTom20-GFP constructs as ex | Open-i
Membrane Proteins/genetics/metabolism*. *Membrane Transport Proteins*. *Mitochondria/metabolism*. *Protein Sorting Signals* ... We analyzed the mitochondria-targeting signal of rat Tom20 (rTom20) in COS-7 cells, using green fluorescent protein (GFP) as ... We analyzed the mitochondria-targeting signal of rat Tom20 (rTom20) in COS-7 cells, using green fluorescent protein (GFP) as ... The mitochondria-targeting signal identified in vivo also functioned in the in vitro system. We conclude that NH(2)-terminal ...https://openi.nlm.nih.gov/detailedresult.php?img=PMC2192658_JCB0003112.f5&req=4
Chloroplast aggregation during the cold-positioning response in the liverwort Marchantia polymorpha | SpringerLink
Bannai H, Tamada Y, Maruyama O, Nakai K, Miyano S (2002) Extensive feature detection of N-terminal protein sorting signals. ... Suetsugu N, Yamada N, Kagawa T, Yonekura H, Uyeda TQ, Kadota A, Wada M (2010) Two kinesin-like proteins mediate actin-based ... Shen Z, Liu YC, Bibeau JP, Lemoi KP, Tüzel E, Vidali L (2015) The kinesin-like proteins, KAC1/2, regulate actin dynamics ... Lee YJ, Kim DH, Kim YW, Hwang I (2001) Identification of a signal that distinguishes between the chloroplast outer envelope ...https://link.springer.com/article/10.1007%2Fs10265-017-0958-9
Systematic identification and integrative analysis of novel genes expressed specifically or predominantly in mouse epididymis |...
PSORT II  was used to predict protein sorting signals and intracellular or extracellular localizations. ... acyl-CoA binding protein; Glyco_hydro_35, Glycosyl hydrolases family 35; SCP, sperm coating protein-like extracellular protein ... Of the 15 expressed proteins, six proteins were detected in the culture media (Figure 7A), whereas the remaining nine proteins ... UniGene proteins with a myc/His tag were immunoprecipitated with an anti-myc monoclonal antibody (9B11; Cell Signaling ...https://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-7-314
Frontiers | Evaluation of Secretion Prediction Highlights Differing Approaches Needed for Oomycete and Fungal Effectors | Plant...
We observe that for a set of fungal SwissProt protein sequences, SignalP 4 and the neural network predictors of SignalP 3 (D- ... was unable to reliably predict the signal peptide of the oomycete Crinkler effectors in the test set. Our assessment of ... We observe that for a set of fungal SwissProt protein sequences, SignalP 4 and the neural network predictors of SignalP 3 (D- ... was unable to reliably predict the signal peptide of the oomycete... ...https://www.frontiersin.org/articles/10.3389/fpls.2015.01168/full
Protein subcellular localization prediction - Wikipedia
Nakai, K. Protein sorting signals and prediction of subcellular localization. Adv. Protein Chem., 2000, 54, 277-344. Chou, K. C ... Nakai K (2000). "Protein sorting signals and prediction of subcellular localization". Advances in Protein Chemistry. 54: 277- ... Some are specialized for eukaryotic proteins, some for human proteins, and some for plant proteins. Methods for the prediction ... Schneider G, Fechner U (Jun 2004). "Advances in the prediction of protein targeting signals". Proteomics. 4 (6): 1571-80. doi: ...https://en.wikipedia.org/wiki/Protein_subcellular_localization_prediction
Hogue, B. G.<...
... correct membrane targeting and functional folding of the HIV-1 membrane protein Vpu using a periplasmic signal peptide. Deb, A ...https://asu.pure.elsevier.com/en/persons/brenda-hogue
GENTAUR antibody-antibodies.com The Marketplace for Antibodies : Phosphorylation of the AP2 mu subunit by AAK1 mediates high...
Phosphorylation of the AP2 mu subunit by AAK1 mediates high affinity binding to membrane protein sorting signals. ... Phosphorylation of the AP2 mu subunit by AAK1 mediates high affinity binding to membrane protein sorting signals. During ... WP1049: G Protein Signaling Pathways. WP1110: Oxidative phosphorylation. WP1165: G Protein Signaling Pathways. Related Genes : ... LNX1 is a membrane-bound protein that is involved in signal transduction and protein interactions. LNX1 is an E3 ubiquitin- ...http://www.antibody-antibodies.com/pubmed-PubMed:11877457-PubMedArticl.html
Fam158a - Wikipedia
"Extensive feature detection of N-terminal protein sorting signals". Bioinformatics. 18 (2): 298-305. doi:10.1093/bioinformatics ... encodes a protein which contains a ring finger motif found in several proteins which mediate protein-DNA and protein-protein ... FITM1 is a protein involved in fat storage. DCAF11 is a protein that is known to interact with COP9 and has several alternative ... UPF0172 protein FAM158A, also known as c14orf122 or CGI112, is a protein that in humans is encoded by the FAM158A gene located ...https://en.wikipedia.org/wiki/Fam158a
Characterization of subcellular localization of duck enteritis virus UL51 protein | Virology Journal | Full Text
The DEV UL51 gene product was identified as an approximate 34 kDa protein in DEV-infected cells analyzed by western blotting. ... While the subcellular localization of many alphaherpesvirus UL51 proteins has been well characterized, little is known about ... where duck enteritis virus (DEV) UL51 protein (pUL51) is targeted to. Thus, in this study, we investigated the subcellular ... Knowledge of the subcellular localization of a protein can provide useful insights about its function. ...https://virologyj.biomedcentral.com/articles/10.1186/1743-422X-6-92
Targeting properties and current properties of wild-typ | Open-i
Protein Sorting Signals*. *Protein Transport*. Minor. *Action Potentials. *Amino Acid Sequence. *Calcium/metabolism ... The triad targeting signal of the skeletal muscle calcium channel is localized in the COOH terminus of the alpha(1S) subunit. ... The triad targeting signal of the skeletal muscle calcium channel is localized in the COOH terminus of the alpha(1S) subunit. ... Mapping of the COOH terminus revealed a triad-targeting signal contained in the 55 amino-acid sequence (1607-1661) proximal to ...https://openi.nlm.nih.gov/detailedresult.php?img=PMC2192640_JCB0008008.f6&req=4
A) The positions of three independent mutations in the | Open-i
Protein Sorting Signals. *Protein Structure, Tertiary. *Receptors, Cell Surface/genetics. *Recombinant Fusion Proteins/ ... protein for recognition of the retrieval signal domains of cargo proteins during their recruitment into retrograde vesicles. ... protein for recognition of the retrieval signal domains of cargo proteins during their recruitment into retrograde vesicles. ... Sorting of yeast membrane proteins into an endosome-to-Golgi pathway involves direct interaction of their cytosolic domains ...https://openi.nlm.nih.gov/detailedresult.php?img=PMC2192648_JCB0005138.f2&req=4
Reversible static detention of VHL and MDM2 by the nucl | Open-i
Protein Sorting Signals. *Protein Transport/physiology. *Proto-Oncogene Proteins c-mdm2. *Rats ... A protein surface region of VHL's beta-sheet domain was identified as a discrete [H+]-responsive nucleolar detention signal ... A protein surface region of VHL's beta-sheet domain was identified as a discrete [H+]-responsive nucleolar detention signal ... After signal termination, the nucleolus is able to rapidly release these proteins from static detention, thereby restoring ...https://openi.nlm.nih.gov/detailedresult.php?img=PMC2171338_200506030f7&req=4
Life Sciences, School of (SOLS) - Scholarly Works - Arizona State University
... correct membrane targeting and functional folding of the HIV-1 membrane protein Vpu using a periplasmic signal peptide. Deb, A ... Adjuvant-mediated epitope specificity and enhanced neutralizing activity of antibodies targeting dengue virus envelope protein ...https://asu.pure.elsevier.com/en/organisations/life-sciences-school-of-sols/publications/