Gene Ontology - Wikipedia
Whereas gene nomenclature focuses on gene and gene products, the Gene Ontology focuses on the function of the genes and gene ... "The Gene Ontology Resource". Gene Ontology Consortium. Sjcarbon,Gene Ontology Consortium Wiki (2013-07-10). "AmiGO_2_Manual: ... The Gene Ontology project provides an ontology of defined terms representing gene product properties. The ontology covers three ... Their objectives have three aspects: building gene ontology, assigning ontology to gene/gene products and developing software ...
Gene Ontology Classifications
Gene Ontology (GO) Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send ... Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse ...
Gene Ontology Classifications
... Symbol. Name. ID Slc7a15 solute carrier family 7 (cationic amino acid transporter, y+ system), ... Gene Ontology (GO) Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send ... Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse ...
CIT1 Gene Ontology | SGD
Gene Ontology Help CIT1 / YNR001C Gene Ontology GO Annotations consist of four mandatory components: a gene product, a term ... Gene/Complex. Systematic Name/Complex Accession. Qualifier. Gene Ontology Term ID. Gene Ontology Term. Aspect. Annotation ... Gene/Complex. Systematic Name/Complex Accession. Qualifier. Gene Ontology Term ID. Gene Ontology Term. Aspect. Annotation ... Gene/Complex. Systematic Name/Complex Accession. Qualifier. Gene Ontology Term ID. Gene Ontology Term. Aspect. Annotation ...
ATP8 Gene Ontology | SGD
Gene Ontology Help ATP8 / Q0080 Gene Ontology GO Annotations consist of four mandatory components: a gene product, a term from ... Gene/Complex. Systematic Name/Complex Accession. Qualifier. Gene Ontology Term ID. Gene Ontology Term. Aspect. Annotation ... Gene/Complex. Systematic Name/Complex Accession. Qualifier. Gene Ontology Term ID. Gene Ontology Term. Aspect. Annotation ... Gene/Complex. Systematic Name/Complex Accession. Qualifier. Gene Ontology Term ID. Gene Ontology Term. Aspect. Annotation ...
FUS3 Gene Ontology | SGD
Gene Ontology Help FUS3 / YBL016W Gene Ontology GO Annotations consist of four mandatory components: a gene product, a term ... Gene/Complex. Systematic Name/Complex Accession. Qualifier. Gene Ontology Term ID. Gene Ontology Term. Aspect. Annotation ... Gene/Complex. Systematic Name/Complex Accession. Qualifier. Gene Ontology Term ID. Gene Ontology Term. Aspect. Annotation ... Gene/Complex. Systematic Name/Complex Accession. Qualifier. Gene Ontology Term ID. Gene Ontology Term. Aspect. Annotation ...
rescue gene - Ontology Browser - Rat Genome Database
Genes Community Projects (beta) QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data ... rescue_gene (SO:0000816). Annotations: Rat: (0) Mouse: (0) Human: (0) Chinchilla: (0) Bonobo: (0) Dog: (0) Squirrel: (0) Pig: ( ... Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene ... OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) (beta) Variant Visualizer Multi-Ontology ...
The MISO Sequence Ontology Browser - GENE SILENCED BY RNA INTERFERENCE
Frontiers | Analysis of Effect of Schisandra in the Treatment of Myocardial Infarction Based on Three-Mode Gene Ontology Network
... enriched gene ontology (GO) terms of AMI related genes were used to construct a gene ontology interaction (GOI) network, which ... Construction of "component-gene ontology" network. To construct the "component-gene ontology" two-mode network, which was based ... Figure 5. The "component-gene ontology-effect" three-mode network of Schisandra. Firstly, the AMI target related gene ontology ... "component-gene ontology" two-mode network (A). Then, the "gene ontology-effect" two-mode network (C) for the treatment of AM ...
YRC Public Data Repository - Gene Ontology - centriole
The YRC PDR provides for the searching of millions of protein descriptions from many databases to find proteins and public experimental data describing those proteins produced by the YRC. The experimental data is in the form of mass spectrometry, yeast two-hybrid, protein structure prediction, light microscopy and protein complex predictions.
YRC Public Data Repository - Gene Ontology - RNA stabilization
The YRC PDR provides for the searching of millions of protein descriptions from many databases to find proteins and public experimental data describing those proteins produced by the YRC. The experimental data is in the form of mass spectrometry, yeast two-hybrid, protein structure prediction, light microscopy and protein complex predictions.
Applying Support Vector Machines for Gene ontology based gene function prediction | BMC Bioinformatics | Full Text
In our approach, annotation was provided through Gene Ontology terms by applying multiple Support Vector Machines (SVM) for the ... automated annotation system that overcomes many of the usual problems by applying a controlled vocabulary of Gene Ontology and ... reliable and accurate function assignments of gene products. A variety of methods has been designed to annotate sequences on a ... genome.dkfz-heidelberg.de/pub/agd/gene_association.agd_Xenopus . ... The Gene Ontology Consortium: Gene Ontology: tool for the ...
Predicting protein-protein interactions in Arabidopsis thaliana through integration of orthology, gene ontology and co...
... gene ontology and co-expression. Stefanie De Bodt (UGent) , Sebastian Proost (UGent) , Klaas Vandepoele (UGent) , Pierre Rouzé ... "Predicting Protein-Protein Interactions in Arabidopsis Thaliana through Integration of Orthology, Gene Ontology and Co- ... "Predicting Protein-Protein Interactions in Arabidopsis Thaliana through Integration of Orthology, Gene Ontology and Co- ... "Predicting Protein-Protein Interactions in Arabidopsis Thaliana through Integration of Orthology, Gene Ontology and Co- ...
Tools To Find Gene Ontology Term Enrichment
For those unfamiliar with the concept it means that given a list of gene names they want to find out which gene ontology terms ... Yeah I read a paper in which they did the Gene Ontology Term Enrichment analysis exactly like you said here. And I wanna ... gene enrichment • 61k views ADD COMMENT • link updated 5 weeks ago by Ram 41k • written 13.7 years ago by Biostar User ★ ... Looks like it only matches the user-provided gene list with the user-provided GO terms with associated gene list. LightGOEAs ...
GORouter: an RDF model for providing semantic query and inference services for Gene Ontology and its associations | BMC...
Gene Ontology (GO) is widely used for annotations of genes and gene products of different organisms. However, there are ... creates additional ontology mappings between GO terms, and introduces a set of inference rulebases. Furthermore, we use the ... Lack of sufficient semantic relationships between pairs of terms coming from the three independent GO sub-ontologies, that ... The most renowned biological ontology, Gene Ontology (GO) is widely used for annotations of genes and gene products of ...
Programmed cell death in host-symbiont associations, viewed through the Gene Ontology | BMC Microbiology | Full Text
... microbes and hosts for controlling PCD and the Gene Ontology terms developed by the Plant-Associated Microbe Gene Ontology ( ... The Plant-Associated Microbe Gene Ontology (PAMGO) Consortium: Community development of new Gene Ontology terms describing ... The Gene Ontology. The GO is a controlled vocabulary comprised of GO terms that describe gene product attributes in any ... microbes and hosts for controlling PCD and the Gene Ontology terms developed by the Plant-Associated Microbe Gene Ontology ( ...
The Notch and Wnt pathways regulate stemness and differentiation in human fallopian tube organoids | Nature Communications
Microarray analysis reveals that inhibition of Notch signalling causes downregulation of stem cell-associated genes in parallel ... Gene ontology enrichment analysis. The list of all upregulated target genes (cutoff ,1.5-fold) was uploaded to the GOrilla ... 26 to perform gene ontology enrichment analysis of the list of genes regulated by Notch that were identified with microarray. ... c) Gene Set Enrichment Analysis of the regulated genes after DBZ treatment identified by microarray, compared with a set of ...
Gene ontology analysis of the centrosome proteomes of Drosophila and human :: MPG.PuRe
Gene ontology analysis of the centrosome proteomes of Drosophila and human ... Muller, H., Schmidt, D., Dreher, F., Herwig, R., Ploubidou, A., & Lange, B. M. (2011). Gene ontology analysis of the centrosome ... To analyze functional and biochemical interdependencies further, we carried out an analysis of the gene ontology (GO) ...
Gene Ontology Data Archive | Zenodo
FlyBase: Enhancing Drosophila Gene Ontology annotations
Gene Ontology (GO) terms are used to describe three attributes of wild-type gene products: their molecular function, the ... Genes, Insect. Genome, Insect. Genomics. Vocabulary, Controlled Permanent link to this record. http://hdl.handle.net/20.500. ...
GOme - The Gene Ontology Cluster Database
QuickGOFrontiers | SP3 Protocol for Proteomic Plant Sample Preparation Prior LC-MS/MS
Gene Ontology Analysis. The protein classification and mapping according to cellular components (GOCC, gene ontology cellular ...
Time-dependent specific molecular signatures of inflammation and remodelling are associated with trimethylamine-N-oxide (TMAO)...
... and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways were modulated after a short (24H) compared to a long (48H) ... Enriched gene ontology biological processes (GO BPs). GO BP analysis after Gene set enrichment analysis (GSEA) allowed the ... Specifically, few Gene Ontology biological processes (BPs) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways were ... was performed on the fold-change ranked gene lists using the ClusterProfiler package with the Gene Ontology Biological Process ...
Newest 'gene-ontology' Questions - Bioinformatics Stack Exchange
Why are my genes filtered for Gene Ontology term enrichment? When I enter a list of gene names into common gene ontology (GO) ... Newest gene-ontology questions feed Subscribe to RSS Newest gene-ontology questions feed To subscribe to this RSS feed, copy ... How to rearrange gene ontology obo file? I have a gene ontology obo file, and would like to rearrange the obo format file in a ... Retrieving all genes for a gene ontology term Im looking for an easy way to retrieve all the genes in a list that are ...
Index of /mapping files/gene ontology mappings
Gene Ontology
- MATLAB & Simulink
- MathWorks 日本
... enrichment analysis of microarray expression results using Gene Ontology networks ... Gene Ontology. Real-time Gene Ontology (GO) information; enrichment analysis of microarray expression results using Gene ... Data structure containing Gene Ontology (GO) information. term. Data structure containing information about Gene Ontology (GO) ... Read annotations from Gene Ontology annotated file. num2goid. Convert numbers to Gene Ontology IDs. ...
Chemical Gene Ontology Enriched Associations - John Snow Labs
This analysis was done using the tool GO-TermFinder resulting in GO terms shared between the genes, creating information used ... molecular functions or cellular components that might be involved in the effect of the chemical over the genes and/or the ... enrichment analyses performed for groups of genes that are in some way affected by a chemical. ... This dataset contains the results of Gene Ontology (GO) ... Gene_Ontology. Gene ontology (GO). Gene ontology is a ...