Expressed sequence tag - Wikipedia
In genetics, an expressed sequence tag (EST) is a short sub-sequence of a cDNA sequence. ESTs may be used to identify gene ... Because of the way ESTs are sequenced, many distinct expressed sequence tags are often partial sequences that correspond to the ... Jun 1991). "Complementary DNA sequencing: expressed sequence tags and human genome project". Science. 252 (5013): 1651-6. ... In an effort to reduce the number of expressed sequence tags for downstream gene discovery analyses, several groups assembled ...
WikiGenes - Expressed Sequence Tags
... expressed sequence tags upon hSNF5/INI1 induction [4].. *Recently, sequencing of a human expressed sequence tag, which maps ... Associations of Expressed Sequence Tags with chemical compounds. *We identified an expressed sequence tag clone that shared ... Gene context of Expressed Sequence Tags. *However, analysis of expressed sequence tag (EST) databases indicated that there ... The amino acid sequence of Hda1p was used to search the GenBank/expressed sequence tag databases to identify partial sequences ...
Assembly of 500,000 Inter-Specific Catfish Expressed Sequence Tags and Large Scale Gene-Associated Marker Development for...
Expressed Sequence Tag (EST) sequencing is one of the most efficient means for gene discovery and gene expression profiling. ... Assembly of 500,000 Inter-Specific Catfish Expressed Sequence Tags and Large Scale Gene-Associated Marker Development for ... The JGI EST sequencing had an overall sequencing success rate of 73% with an average length of 576 bp. All the ESTs were ... Through the Community Sequencing Program, a catfish EST sequencing project was selected by the DOEs Joint Genome Institute ( ...
Identification and characterization of thirty novel microsatellite DNA markers from the Chinese mitten crab Eriocheir sinensis...
Sixteen polymorphic simple sequence repeat markers from expressed sequence tags of the Chinese mitten crab Eriocheir sinensis. ... sinensis expressed sequence tags. BMC Res Notes 9, 105 (2016). https://doi.org/10.1186/s13104-016-1909-6 ... LC contributed to analysis of sequences. All authors read and approved the final manuscript. ... The microsatellite sequences are available through the National Centre for Biotechnology Information (http://www.ncbi.nlm.nih. ...
Expressed sequence tags from the Yukon ecotype of Thellungiella reveal that gene expression in response to cold, drought and...
Expressed sequence tags from the Yukon ecotype of Thellungiella reveal that gene expression in response to cold, drought and ... Unigenes from the cold library were more similar to Arabidopsis sequences than either drought- or salinity-induced sequences, ... Among the unigenes, 94.1% encoded products that were most similar in amino acid sequence to Arabidopsis and 1.5% had no match ... Some of the ESTs in this collection have low sequence similarity with those in Genbank suggesting that they may encode ...
Expressed Sequence Tags | Pharmacognosy Research
Pharmacognosy Research (Pharmacogn Res.). [ISSN: Print -0976-4836, Online - 0974-8490] [http://www.phcogres.com], It provides peer-reviewed original research articles from the field of Natural Products. The journal serves an international audience of scientists and researchers in a variety of research and academia by quickly disseminating research findings related to Medicinal Plants and Natural Products.. It is a peer reviewed journal aiming to publish high quality original research articles, methods, techniques and evaluation reports, critical reviews, short communications, commentaries and editorials of all aspects of medicinal plant research. The journal is aimed at a broad readership, publishing articles on all aspects of pharmacognosy, and related fields. The journal aims to increase understanding of pharmacognosy as well as to direct and foster further research through the dissemination of scientific information by the publication of manuscripts. The submissions of original contributions ...
Expressed Sequence Tags | Profiles RNS
"Expressed Sequence Tags" by people in this website by year, and whether "Expressed Sequence Tags" was a major or minor topic of ... "Expressed Sequence Tags" by people in Profiles.. * Development of an integrated transcript sequence database and a gene ... "Expressed Sequence Tags" is a descriptor in the National Library of Medicines controlled vocabulary thesaurus, MeSH (Medical ... Expressed Sequence Tags*Expressed Sequence Tags. *Expressed Sequence Tag. *Sequence Tag, Expressed ...
Palavra-chave » Expressed Sequence Tags » Somos UFMG
Frontiers | Analysis of genes that are differentially expressed during the Sclerotinia sclerotiorum-Phaseolus vulgaris...
... cDNA library approach was used for the identification of pathogen and plant genes that were differentially expressed during ... cDNA library approach was used for the identification of pathogen and plant genes that were differentially expressed during ... A total of 1440 plasmids were sequenced. After removing the vector and adaptor sequences, the cleaned expressed sequence tags ( ... Bioinformatic Analyses of Expressed Sequence Tags (ESTs). The sequences were pre-processed using Phred (Ewing and Green, 1998) ...
Daphnia: the companion papers for the genome sequence
Expressed sequence tag (EST) databases provide a valuable source of genetic data in organisms whose genome sequence information ... ESTPiper - a web-based analysis pipeline for expressed sequence tags EST sequencing projects are increasing in scale and scope ... Simple sequence repeat variation in the Daphnia pulex genome Simple sequence repeats (SSRs) are highly variable features of all ... Sequence analysis of the Daphnia pulex genome holds some surprises that could not have been anticipated from what was learned ...
Characterization of expressed sequence tags from a gallus gallus pineal gland cDNA library : WestminsterResearch
Characterization of expressed sequence tags from a gallus gallus pineal gland cDNA library. Comparative and Functional Genomics ... Characterization of expressed sequence tags from a gallus gallus pineal gland cDNA library. Hartman, S., Touchton, G., Wynn, J ... Characterization of expressed sequence tags from a gallus gallus pineal gland cDNA library. ... Here, we describe the isolation and characterization of expressed sequence tags (ESTs) isolated from a chicken pineal gland ...
Deletion mapping of homoeologous group 6-specific wheat expressed sequence tags. | Genetics;168(2): 677-86, 2004 Oct. |...
Deletion mapping of homoeologous group 6-specific wheat expressed sequence tags.. Randhawa, H S; Dilbirligi, M; Sidhu, D; ... About 43% of the wheat group 6 ESTs identified rice homologs upon comparisons of genome sequences. Fifty-eight percent of these ...
An expressed sequence tag analysis of the chicken reproductive tract transcriptome | College of Agricultural Sciences
An expressed sequence tag analysis of the chicken reproductive tract transcriptome. Title. An expressed sequence tag analysis ... An expressed sequence tag analysis of the chicken reproductive tract transcriptome. ...
Identification of Expressed Resistance Gene Analogs from Peanut (<i>Arachis hypogaea</i> L.) Expressed...
Identification of Expressed Resistance Gene Analogs from Peanut (Arachis hypogaea L.) Expressed Sequence Tags Zhanji Liu1,2†, ... Identification of Expressed Resistance Gene Analogs from Peanut (Arachis hypogaea L.) Expressed Sequence Tags[J]. J Integr ... from peanut expressed sequence tags (ESTs) and to develop polymorphic markers. The protein sequences of 54 known R genes were ... Analysis of Resistance to Powdery Mildew in Wheat Based on Expressed Sequence Tags (EST) Technique [J]. J Integr Plant Biol., ...
Alice: Endosperm-preferred expression of maize genes as revealed by transcriptome-wide analysis of expressed sequence tags.
Genomic resources for Myzus persicae: EST sequencing, SNP identification, and microarray design
These include previously unknown sequence data, a collection of expressed genes, molecular markers, and a DNA microarray that ... Results: Sequencing of 16 M. persicae cDNA libraries generated 26,669 expressed sequence tags (ESTs). Aphids for library ... These include previously unknown sequence data, a collection of expressed genes, molecular markers, and a DNA microarray that ... Genomic resources for Myzus persicae: EST sequencing, SNP identification, and microarray design BMC Genomics. 2007 Nov 16:8:423 ...
HRPT2, encoding parafibromin, is mutated in hyperparathyroidism-jaw tumor syndrome
Virology antibodies - Structure of West Nile Virus | PPT
Analysis and Characterization of Expressed Sequence Tag (EST) and Simple Sequence Repeats (SSR) from Red Sea Bream, Chrysophrys...
... were obtained from expressed sequence tags (EST) of the red sea bream (Chrysophrys major) and gilthead sea bream (Sparus aurata ... A total of 101 and 119 simple sequence repeats (SSR) ... Analysis and Characterization of Expressed Sequence Tag (EST) ... A total of 101 and 119 simple sequence repeats (SSR) were obtained from expressed sequence tags (EST) of the red sea bream ( ... Liu, Y., Chen, S., Liu, C., & Li, F. (2008). Analysis and Characterization of Expressed Sequence Tag (EST) and Simple Sequence ...
Hartnup Disease: Practice Essentials, Background, Pathophysiology
Gene discovery and gene expression in the rice blast fungus, Magnaporthe grisea: Analysis of expressed sequence tags |...
Gene discovery and gene expression in the rice blast fungus, Magnaporthe grisea: Analysis of expressed sequence tags * Ebbole, ...
Paraphyly - Wikipedia
Publications at this Location : USDA ARS
Publications at this Location : USDA ARS
PuRe Publications | Max Planck Institute for Molecular Genetics
Hennig, S.; Panopoulou, G.; Lehrach, H.; Poustka, A.: Comparative expressed sequence tag analysis. In: Analysing Gene ... Groth, D.; Hartmann, S.; Panopoulou, G.; Poustka, A. J.; Hennig, S.: GOblet: annotation of anonymous sequence data with Gene ... Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention. Genome ...
SelectedWorks - Helen Donis-Keller
Twenty-one putative chromosome 7-derived expressed sequence tags (ESTs) identified 33 yeast artificial chromosomes (YACs) or P1 ... We report the construction of an ∼1.7-Mb sequence-ready YAC/BAC clone contig of 8p22-p23. This chromosomal region has been ... LMX1 is a LIM-homeodomain (LIM-HD)-containing protein expressed selectively in insulin-producing β-cell lines, and it it has ... A YAC library enriched for telomere clones was constructed and screened for the humantelomere-specific repeat sequence (TTAGGG ...
Life after ESTs | The Scientist Magazine®
They scan 350 Mb of finished and draft human sequence using three different gene-finding algorithms. Open reading frames (ORFs ... Expressed sequence tags (ESTs) have given researchers a quick if dirty look at the coding potential of the human genome. But ... experiments to conclude that the human genome project will uncover many genes not previously discovered by EST sequencing (Nat ... Expressed sequence tags (ESTs) have given researchers a quick if dirty look at the coding potential of the human genome. But ...
JBPC Publications: 2000 - 2010 | Marine Biological Laboratory
Suga, K., Mark Welch, D. B., Tanaka, Y., Sakakura, Y., & Hagiwara, A. (2007). "Analysis of expressed sequence tags of the ... Kysela, D. T., Palacios, C., & Sogin, M. L. (2005). "Serial analysis of V6 ribosomal sequence tags (SARST-V6): a method for ... "Massively parallel tag sequencing reveals the complexity of anaerobic marine protistan communities." BMC Biol, 7, 72. doi: ... "Archaeal and bacterial diversity of deep marine subsurface sediments analysed by V6-tag sequencing." Paper presented at the ...
Tools to kill: Genome of one of the most destructive plant pathogenic fungi Macrophomina phaseolina | BMC Genomics | Full Text
... and secondary metabolites in comparison to all sequenced ascomycete species. A strikingly distinct set of carbohydrate ... We sequenced and assembled ~49 Mb into 15 super-scaffolds covering 92.83% of the M. phaseolina genome. We predict 14,249 open ... phaseolina is scarce with only 176 expressed sequence tags (ESTs) and 903 nucleotide sequences in the National Center for ... Genome sequencing and assembly. The genome of M. phaseolina was sequenced using a whole-genome shotgun approach. A total of ...
The Antiviral Nucleotide Analogs Cidofovir and Adefovir Are Novel Substrates for Human and Rat Renal Organic Anion Transporter...
expressed sequence tag. hPAHT. human p-aminohippurate transporter. kb. kilobase pair. oatp. organic anion transporting ... end of clone expressed sequence tag (EST)58612 (GenBank accession number AA351032). The oligonucleotide was labeled with [32P] ... The complete DNA sequence of both strands of hOAT1 was determined, and the sense strand sequence is presented in Fig. 2A. The ... A, complete nucleotide sequence of the sense strand of the hOAT1 cDNA and the predicted amino acid sequence of the single large ...