*  Comparison of the Gene Coding Contents and Other Unusual Features of the GC-Rich and AT-Rich Branch Probosciviruses | mSphere
EEHV1(Kimba) has 8 initiator codons and 14 terminator codons that have exact matches to these motifs, compared to 10 and 25 ... or TGA terminator codon lies within the sequence TRRAAAA. In several genes, the terminator is embedded within an A-plus-T block ... with a total of 61 initiator codons and 75 terminator codons displaying these features, compared to 35 initiators and 58 ... Initiator and terminator codon environment.In addition to the highly AT-rich nucleotide content of the intergenic domains, ...
  http://msphere.asm.org/content/1/3/e00091-16
*  INMT Gene - GeneCards | INMT Protein | INMT Antibody
stop_lost, terminator_codon_variant. rs1000196075. --. 30,754,432(+). C/T. intron_variant. rs1000432477. --. 30,757,828(+). G/C ...
  http://www.genecards.org/cgi-bin/carddisp.pl?gene=INMT
*  FKRP Gene - GeneCards | FKRP Protein | FKRP Antibody
stop_lost, terminator_codon_variant. rs104894683. conflicting-interpretations-of-pathogenicity, likely-benign, benign, Limb- ...
  https://www.genecards.org/cgi-bin/carddisp.pl?gene=FKRP
*  benign cementoblastoma 2005:2010[pubdate] *count=100 - BioMedLib™ search engine
Chemical-registry-number] 0 / 3' Untranslated Regions; 0 / 5' Untranslated Regions; 0 / CEMP1 protein, human; 0 / Codon, ... Terminator; 0 / DNA, Complementary; 0 / Proteins; 0 / RNA, Messenger; 0 / Recombinant Proteins; 9007-49-2 / DNA ...
  http://www.bmlsearch.com/?kwr=benign+cementoblastoma+2005:2010%5Bpubdate%5D&cxts=100&stmp=b0
*  Howard Hughes Medical Institution - Research Output - Johns Hopkins University
Terminator Codon Establishing Wiring Specificity in Visual System Circuits: From the Retina to the Brain. Zhang, C., Kolodkin, ... Synthesis at the Speed of Codons. Koutmou, K. S., Radhakrishnan, A. & Green, R. 2015 In : Trends in Biochemical Sciences. 40, ... The DEAD-Box Protein Dhh1p Couples mRNA Decay and Translation by Monitoring Codon Optimality. Radhakrishnan, A., Chen, Y. H., ...
  https://jhu.pure.elsevier.com/en/organisations/howard-hughes-medical-institution-3/publications/?type=%2Fdk%2Fatira%2Fpure%2Fresearchoutput%2Fresearchoutputtypes%2Fcontributiontojournal%2Farticle
*  ASMscience | Mechanism of Bacterial T
Release factors differing in specificity for terminator codons. Proc. Natl. Acad. Sci. USA 61:768-774.. ... Codon recognition by the polypeptide release factor, p. 393-401. In W. E. Hill, , A. Dahlberg, , R. A. Garrett, , P. B. Moore, ... Peptide chain termination: codon, protein factor, and ribosomal requirements. Cold Spring Harbor Symp. Quant. Biol. 34:479.. ... Accumulation of a mRNA decay intermediate by ribosomal pausing at a stop codon. Nucleic Acids Res. 24:1753-1757.. ...
  http://www.asmscience.org/content/book/10.1128/9781555818142.chap44
*  Patent US7300772 - BMP products - Google Patents
This deletes all of the sequences 3′ to the translation terminator codon of the BMP-4 cDNA, juxtaposing this terminator codon ... The protein is preceded by a 5′ untranslated region of 342 bp with stop codons in all frames. The 13 bp region preceding this 5 ... Because the genetic code is degenerate (more than one codon can code for the same amino acid), the number of oligo-nucleotides ... but which differ in codon sequence due to the degeneracies of the genetic code or allelic variations (naturally-occurring base ...
  http://www.google.com/patents/US7300772?dq=6446111
*  Correlation of CAI score and mRNA level with the minimu | Open-i
Codons that code for the same amino acid are often used with unequal frequencies. This phenomenon is termed codon bias. Here, ... Codons that code for the same amino acid are often used with unequal frequencies. This phenomenon is termed codon bias. Here, ... We show that the most used codons in highly expressed genes can be predicted by mRNA structural data and that the codon choice ... We show that the most used codons in highly expressed genes can be predicted by mRNA structural data and that the codon choice ...
  https://openi.nlm.nih.gov/detailedresult.php?img=PMC3814355_gkt740f6p&req=4
*  Gene expression - Conservapedia
... but note that the promoter is not the same thing as the start codon; nor is the RNA polymerase terminator the stop codon. There ... are needed than the 64 possible codons: 64 codons. 20 amino acids. 30 is the compromise made. ... The A and P sites are so close on the ribosome that tRNAs must fit contiguous codons. tRNAs are brought in by EF-Tu (bacteria) ... Stop codons are bound by cytoplasmic release factors, which add water to tRNApeptidyl, cleaving off the polypeptide. ...
  https://www.conservapedia.com/index.php?title=Gene_expression
*  Stop codon - Wikipedia
Genetic code Start codon Terminator gene Griffiths AJF, Miller JH, Suzuki DT, Lewontin RC, Gelbart WM (2000). "Chapter 10 ( ... Stop codon suppression or translational readthrough occurs when in translation a stop codon is interpreted as a sense codon, ... Because of this terminology, stop codons have also been referred to as nonsense codons. Recognition of stop codons in bacteria ... Codons that can form hidden stops are used in genomes more frequently compared to synonymous codons that would otherwise code ...
  https://en.wikipedia.org/wiki/Stop_codon
*  Barrick Lab :: ProtocolsGoldenGateMakingANewPart
4 , (BTK) terminator , ATCC , ggat , GCTG , cagc , , , 4 , (YTK) stop codon + terminator , ATCC%RED%TAA%ENDCOLOR% , %RED%tta% ... YTK: Omit the stop codon. It is typically placed in the next part. For that stop codon to be in-frame, you must end this part ... After that, begin your protein coding sequence in-frame with the second codon. BTK: *Include the stop codon for your gene ... After that, begin your protein coding sequence in-frame with the second codon. ...
  http://barricklab.org/twiki/bin/view/Lab/ProtocolsGoldenGateMakingANewPart?raw=on
*  Cell and Molec Final Flashcards - Cram.com
chain terminator codons occur If you discovered a bacterial cell that contained no restriction enzymes, which of the following ...
  http://www.cram.com/flashcards/cell-and-molec-final-349489
*  Release factor - Wikipedia
Scolnick, E., R. Tompkins, T. Caskey, and M. Nirenberg (1968). Release factors differing in specificity for terminator codons, ... A release factor is a protein that allows for the termination of translation by recognizing the termination codon or stop codon ... Although these stop codons are triplets just like ordinary codons, they are not decoded by tRNAs. It was discovered by Mario ... RF1 recognizes the termination codons UAA and UAG RF2 recognizes UAA and UGA RF3 is a GTP-binding protein that leads to the ...
  https://en.wikipedia.org/wiki/Release_factor
*  Novel HCV core+1 protein, methods for diagnosis of HCV infections, prophylaxis, and for screening of anti-HCV agents -...
As referred to herein, a "stop codon", "missense codon", "nonsense codon", "terminator codon" and "chain-terminating codon" are ... codon into a stop codon; or a substation of the 85.sup.th codon into a stop codon and/or a substitution of the 87.sup.th codon ... substitution of an initiator codon into a terminator codon; or [0066] a substitution of the 25th codon into a stop codon; or [ ... substitution of an initiator codon into a terminator codon; or a substitution of the 25.sup.th codon into a stop codon; or a ...
  http://www.patentsencyclopedia.com/app/20110287406
*  Pharmacological brake-release of mRNA translation enhances cognitive memory | eLife
... fused to the eGFP coding sequence 1 nucleotide downstream of the terminator codon of the second uORF, and flanked by BamHI and ... 1 position a the transcription start site down to one nucleotide after the terminator codon of the second uORF) flanked by KpnI ... UTR of mRNAs to select the initiating AUG codon. Upon phosphorylation of its α-subunit, eIF2 becomes a competitive inhibitor of ...
  https://elifesciences.org/articles/00498
*  PPT - PROTEIN SYNTHESIS PowerPoint presentation | free to download - id: 4287bd-NTYyZ
terminator or stop codon. 200-tRNA. C. C. A. U. G. U. U. U. A. G. C. U. mRNA 38. End Product*The end products of protein ... codon. mRNA 32. aa1. peptide bond. aa2* 1-tRNA. U. A. C. (leaves). 2-tRNA. G. A. U. A. U. G. C. U. A. C. U. U. C. G. A. mRNA. ... codon. mRNA 31. Elongation. peptide bond. aa1. aa2* 1-tRNA. 2-tRNA. anticodon. U. A. C. G. A. U. A. U. G. C. U. A. C. U. U. C. ... Ribosomes move over one codon 33. peptide bonds. aa1. aa2. aa3. 2-tRNA. 3-tRNA. G. A. U. G. A. A. A. U. G. C. U. A. C. U. U. C ...
  http://www.powershow.com/view3/4287bd-NTYyZ/PROTEIN_SYNTHESIS_powerpoint_ppt_presentation
*  Manipulation of the phenolic acid content and digestibility of plant cell walls by targeted expression of genes encoding...
HindIII sites flanking the translation initiation codon and transcriptional terminator allow easy movement of transcription ... Thus, at every position where an alanine is specified by a codon, the codon can be altered to any of the corresponding codons ... 3. The plant of claim 1 wherein sub-optimal codons are modified to Triticum spp. preferred codons.. 4. The plant of claim 1, ... Where possible, codon usage has been optimized in constructed reading frames (codon choice based on published barley ...
  http://www.patentgenius.com/patent/7132589.html
*  Patent US5858777 - Methods and reagents for regulating telomere length and telomerase activity - Google Patents
... transcription terminators, a start codon (i.e., ATG), splicing signals for introns, and stop codons. ... end by an initiation codon (ATG) or another codon that does not encode a stop codon and on the 3'-end by a stop codon but ... The initiating methionine codon is marked with "***" and the stop codon with "---". Plasmid pGRN92 does not comprise ... 4. The initiating methionine codon is believed to be at nucleotides 16-18 of the sequence; the termination codon is marked with ...
  http://www.google.com/patents/US5858777?dq=5,815,488
*  Distinct roles of Rho1, Cdc42, and Cyk3 in septum formation and abscission during yeast cytokinesis | JCB
... and fragment 2 contained base pairs from 1,740 of the ORF through the stop codon and terminator. These two fragments have 20 bp ... YEp13-cdc24ΔPB1-GFP was constructed in the same way except that a primer generating a stop codon between the GFP sequence and ... A new NotI site was then introduced immediately downstream of the RHO1 start codon by site-directed mutagenesis using the ... YEp13-cdc24ΔPB1 was constructed by using a mutagenesis kit (QuikChange; Agilent Technologies) to introduce a stop codon into ...
  http://jcb.rupress.org/content/202/2/311
*  Plus it
The LSL sequence contains loxP-stop codons-3x SV40 polyA-loxP as transcriptional terminator. The vector map is shown in Figure ...
  http://www.jneurosci.org/content/36/43/11059
*  Mutations in genes encoding melanosomal proteins cause pigmentary gla" by M G. Anderson, R S. Smith et al.
IPD is caused by a premature stop codon mutation in the Gpnmb (GpnmbR150X) gene, as proved by the occurrence of IPD only in D2 ... Atrophy, Chromosome-Mapping, Chromosomes-Artificial-Bacterial, Codon-Nonsense, Codon-Terminator, Crosses-Genetic, Epistasis- ... IPD is caused by a premature stop codon mutation in the Gpnmb (GpnmbR150X) gene, as proved by the occurrence of IPD only in D2 ...
  https://mouseion.jax.org/stfb2000_2009/341/
*  IGEM:Harvard/2009/Notebook/Harvard iGEM 2010/2010/06/25 - OpenWetWare
We began this week trying to ligate the pENTCUP2 promoter, NosT terminator, and NosT terminator plus stop codon into the V0120 ... 2. NosT + stop terminator. 3. V0120 digested.. Upon gel extraction and gel purification, we ligated the inserts into the ...
  https://openwetware.org/wiki/IGEM:Harvard/2009/Notebook/Harvard_iGEM_2010/2010/06/25
*  Ch. 10 Nucleic Acids & Protein SynthesisWhat controls the production of proteins in cells? DNA DNA Every time new cells develop...
3 bases are used in the codon sequence. AUG is always the "initiator" codon. UAA or UAG are always the "terminator" codon. ... 16 CodonA codon is a sequence of three nitrogen bases in the m-RNA molecule. This This is produced during transcription. Each ... 17 AnticodonAn anticodon is a three base sequence that pairs with the codon sequence. Anticodons are produced by t-RNA This is ... AUG CUU ACG CAU GUA UAU = Codon (transcription) UAC GAA UGC GUA CAU AUA= Anticodon (translation) AUG UCA CUA GCU UCG UAG = ...
  http://slideplayer.com/slide/4242906/
*  List of MeSH codes (G14) - Wikipedia
... codon MeSH G14.340.024.340.137.190.225 --- codon, initiator MeSH G14.340.024.340.137.190.250 --- codon, terminator MeSH G14.340 ... codon, initiator MeSH G14.335.355.250 --- codon, terminator MeSH G14.335.355.250.235 --- codon, nonsense MeSH G14.335.760.640 ... terminator regions (genetics) MeSH G14.340.024.340.137.750.840 --- transcription initiation site MeSH G14.340.024.340.137.775 ... terminator regions (genetics) MeSH G14.080.708.330 --- interspersed repetitive sequences MeSH G14.080.708.330.200 --- dna ...
  https://en.wikipedia.org/wiki/List_of_MeSH_codes_(G14)
*  List of MeSH codes (D13) - Wikipedia
... codon MeSH D13.444.735.544.355.225 --- codon, initiator MeSH D13.444.735.544.355.250 --- codon, terminator MeSH D13.444.735.544 ... 235 --- codon, nonsense MeSH D13.444.735.544.500 --- rna caps MeSH D13.444.735.544.500.710 --- rna cap analogs MeSH D13.444. ...
  https://en.wikipedia.org/wiki/List_of_MeSH_codes_(D13)