*  Samson RY[au] - PubMed - NCBI
Archaeal chromosome biology.. Samson RY, Bell SD.. J Mol Microbiol Biotechnol. 2014;24(5-6):420-7. doi: 10.1159/000368854. Epub ... Specificity and function of archaeal DNA replication initiator proteins.. Samson RY, Xu Y, Gadelha C, Stone TA, Faqiri JN, Li D ... Archaeal chromatin proteins histone HMtB and Alba have lost DNA-binding ability in laboratory strains of Methanothermobacter ... Molecular and structural basis of ESCRT-III recruitment to membranes during archaeal cell division. ...
  https://www.ncbi.nlm.nih.gov/pubmed?cmd=search&term=Samson+RY%5Bau%5D&dispmax=50
*  Publications - Universität Ulm
She Q, Peng X, Zillig W, Garrett RA (2001) Gene capture in archaeal chromosomes. Nature 409(6819): 478. ... 2012) An archaeal immune system can detect multiple protospacer adjacent motifs (PAMs) to target invader DNA. J Biol Chem. 287 ... Lillestøl RK, Redder P, Garrett RA, Brugger K (2006) A putative viral defence mechanism in archaeal cells. Archaea 2(1): 59-72 ... An archaeal CRISPR type III-B system exhibiting distinctive RNA targeting features and mediating dual RNA and DNA interference ...
  https://www.uni-ulm.de/nawi/nawi-for1680/publications/
*  Frontiers | DNA replication origins in archaea | Microbiology
Moreover, comparative genomic analyses have revealed that the mosaics of replicator-initiator pairings in archaeal chromosomes ... Moreover, comparative genomic analyses have revealed that the mosaics of replicator-initiator pairings in archaeal chromosomes ... Archaea, the third domain of life, use a single or multiple origin(s) to initiate replication of their circular chromosomes. ... Archaea, the third domain of life, use a single or multiple origin(s) to initiate replication of their circular chromosomes. ...
  https://www.frontiersin.org/articles/10.3389/fmicb.2014.00179/full
*  Viral Eukaryogenesis: Was the Ancestor of the Nucleus a Complex DNA Virus? | SpringerLink
This redundancy allowed loss of the archaeal chromosome, generating an organism with eukaryotic features. The evolution of ... The coevolution of phagocytosis and the nucleus rendered much of the host archaeal genome redundant since the protoeukaryote ... These include mRNA capping, linear chromosomes, and separation of transcription from translation. In the model, phagocytosis ...
  https://link.springer.com/article/10.1007%2Fs002390010215
*  Genome - Wikipedia
Samson, Rachel (2014). "Archaeal Chromosome Biology". J Mol Microbiol Biotechnol. doi:10.1159/000368854. PMC 5175462 . ... Eukaryotic genomes are composed of one or more linear DNA chromosomes. The number of chromosomes varies widely from Jack jumper ... Archaea have a single circular chromosome. Most bacteria also have a single circular chromosome; however, some bacterial ... "Replication of Linear Bacterial Chromosomes: No Longer Going Around in Circles". The Bacterial Chromosome: 525. 2005. doi: ...
  https://en.wikipedia.org/wiki/Genome
*  Archaeal integrases and mechanisms of gene capture | Biochemical Society Transactions
Archaeal integrases facilitate the formation of two distinctive types of integrated element within archaeal chromosomes: the ... Two mechanisms have been proposed for stably maintaining an integrated element within archaeal chromosomes. There is also ... Archaeal integrases and mechanisms of gene capture. Q. She, B. Shen, L. Chen ... Archaeal integrases and mechanisms of gene capture Message Subject (Your Name) has forwarded a page to you from Biochemical ...
  http://www.biochemsoctrans.org/content/32/2/222
*  Genome
"Archaeal Chromosome Biology". J Mol Microbiol Biotechnol. doi:10.1159/000368854. PMC 5175462 . Retrieved 6 November 2017.. ... "Replication of Linear Bacterial Chromosomes: No Longer Going Around in Circles". The Bacterial Chromosome: 525. 2005. doi: ... An image of the 46 chromosomes making up the diploid genome of a human male. (The mitochondrial chromosome is not shown.) ... Archaea have a single circular chromosome.[18] Most bacteria also have a single circular chromosome; however, some bacterial ...
  https://readtiger.com/wkp/en/Genome
*  Chargaff's rules - Wikipedia
... the bacterial chromosomes, the double stranded DNA viral genomes, and the archaeal chromosomes. It does not apply to organellar ... specifically it applies to the eukaryotic chromosomes, ...
  https://en.wikipedia.org/wiki/Chargaff's_rules
*  ASMscience | DNA Replication and Cell
While an ever-growing body of data has yielded considerable insight into the form and function of the archaeal DNA replication ... Indeed, what little is known appears to be suggesting that diverse mechanisms may be employed to regulate chromosome copy ... The current state of knowledge of the machineries that drive the archaeal cell cycle is discussed. In bacteria, the functional ... Researchers examined nucleoid distribution during the cell cycle, and the results suggested that chromosome segregation was ...
  http://www.asmscience.org/content/book/10.1128/9781555815516.ch03
*  Energetics and genetics across the prokaryote-eukaryote divide | Biology Direct | Full Text
... variable numbers of now straight chromosomes, and presumably, an inability to divide by the standard archaeal chromosomal ... Extrachromosomal element capture and the evolution of multiple replication origins in archaeal chromosomes. Proc Natl Acad Sci ... If the constraint was circular chromosomes [38] why didn't bacteria with straight chromosomes and multiple replicons become ... which have the potential to break circular bacterial chromosomes into straight chromosomes [111]. In providing the ribozyme ...
  https://0-biologydirect-biomedcentral-com.brum.beds.ac.uk/articles/10.1186/1745-6150-6-35
*  List of MeSH codes (A11) - Wikipedia
... chromosomes, archaeal MeSH A11.284.187.178 - chromosomes, artificial MeSH A11.284.187.178.170 - chromosomes, artificial, ... x chromosome MeSH A11.284.187.865.982.500 - chromosomes, human, x MeSH A11.284.187.865.983 - y chromosome MeSH A11.284.187.865. ... chromosomes, human, pair 12 MeSH A11.284.187.520.300.325.680 - chromosomes, human, x MeSH A11.284.187.520.300.370 - chromosomes ... philadelphia chromosome MeSH A11.284.187.520.300.505.757 - chromosomes, human, y MeSH A11.284.187.560 - chromosomes, plant MeSH ...
  https://en.wikipedia.org/wiki/List_of_MeSH_codes_(A11)
*  Nucleoid - Wikipedia
As in all cellular organisms, length of the DNA molecules of bacterial and archaeal chromosomes is very large compared to the ... Wang, W.; Li, G.; Chen, C.; Xie, X. S.; Zhuang, X. (2011). "Chromosome organization by a nucleoid-associated protein in live ... Qian, Z; Macvanin, M; Dimitriadis, EK; He, X; Zhurkin, V; Adhya, S (2015). "A New Noncoding RNA Arranges Bacterial Chromosome ... Smith, BT; Grossman, AD; Walker, GC (2002). "Localization of UvrA and effect of DNA damage on the chromosome of Bacillus ...
  https://en.wikipedia.org/wiki/Nucleoid
*  Microbiology (Basic)
1. The archaeal chromosomes that have been studied consist of a single, closed DNA circle like those of bacteria, except that ... 2. Archaeal cell wall chemistry is different from that of bacteria a. Lacks muramic acid and D-amino acids and therefore is ... 2. Archaeal mRNA is like that of bacteria (i.e., it may be polygenic, there is no evidence of intron-containing precursors, and ... B. Archaeal cell walls 1. Archaea can stain either gram positive or gram negative, but their cell wall structure differs ...
  http://mikrobiologicoke.blogspot.com/2009/06/microbiology-basic.html
*  Oxygen and Sex | Proceedings of the Royal Society of London B: Biological Sciences
... host's DNA and incomplete repair of these breaks could have caused the transition from a single Archaeal ring-like chromosome ... to repair chromosomes. Further steps of meiosis mostly just represent modifications of mitosis: alignment of chromosomes in ... 2004 Archaeal histones: structures, stability and DNA binding. Biochem. Soc. Trans. 32, 227-230. (doi:10.1042/bst0320227). ... Archaeal DSBs can be induced by exogenous oxidative stress caused by ultraviolet light or chemicals [32]. Furthermore, all ...
  http://rspb.royalsocietypublishing.org/content/285/1872/20172706?cpetoc
*  The origin of introns and their role in eukaryogenesis: a compromise solution to the introns-early versus introns-late debate? ...
... introns located in distant regions of the chromosome could be disintegration of the circular chromosome of the archaeal host ... Some of the 'archaeal' proteins of eukaryotes do show phylogenetic affinity with a specific archaeal lineage, it is just that ... archaeal chromosome that formed the basis of the emerging eukaryotic genome. This intron invasion triggered the formation of ... Replication of linear chromosomes presents a problem as it leads to gradual loss of the terminal (telomeric) regions [89-91]. ...
  https://biologydirect.biomedcentral.com/articles/10.1186/1745-6150-1-22
*  Journal of Cosmology. Origin & Evolution of Life From Other Planets
As summed up by Koonin (2009) "in prokaryotes, the interaction between bacterial and archaeal chromosomes and selfish replicons ... Hence, plasmids serve as genetic couriers which are able to travel from chromosome to chromosome, from cell to cell, and from ... and the distinction between chromosomes and megaplasmids is blurred to such an extent that chromosomes are, probably, best ... RNAi in association with introns/transposons can even control chromosome segregation and the expression of large chromosome ...
  http://cosmology.net/Cosmology2.html
*  A computational approach for identifying pathogenicity islands in prokaryotic genomes | BMC Bioinformatics | Full Text
The sequence files of 148 prokaryotic complete genomes consisting of 157 chromosomes, including 17 archaeal ones as of January ... As for the 157 chromosomes examined (Table 1S [see Additional file 1]), the length proportion of GIs to the chromosome averaged ... for chromosome I and 32.2% for chromosome II. The genome of L. interrogans was reported to have the biggest number of proteins ... PAIs in prokaryotic chromosomes (see supplementary Table 3S for the complete information) [see Additional file 3] ...
  https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-6-184
*  Global features of sequences of bacterial chromosomes, plasmids and phages revealed by analysis of oligonucleotide usage...
Sequences of 155 bacterial chromosomes including eubacterial, archaeal and cyanobacterial genomes, 316 plasmids and 104 phages ... Five of the 155 bacterial chromosomes have anomalously high PS, of which the chromosomes of Xylella fastidiosa 9a5c and ... 12859_2004_206_MOESM1_ESM.xls Additional File 1: Global features of all studied bacterial chromosomes bacterial chromosome, ... local PS was only slightly higher than in the whole chromosome (Table 1) indicating strand symmetry throughout the chromosome. ...
  https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-5-90
*  Selection for Chromosome Architecture in Bacteria | SpringerLink
Bacterial chromosomes are immense polymers whose faithful replication and segregation are crucial to cell survival. The ability ... Zhang R, Zhang CT (2005) Identification of replication origins in archaeal genomes based on the Z-curve method. Archaea 1:335- ... Lobry JR, Louarn JM (2003) Polarisation of prokaryotic chromosomes. Curr Opin Microbiol 6:101-108CrossRefPubMedGoogle Scholar ... Liu SL, Sanderson KE (1995a) The chromosome of Salmonella paratyphi A is inverted by recombination between rrnH and rrnG. J ...
  https://link.springer.com/article/10.1007%2Fs00239-005-0192-2
*  An alternative beads‐on‐a‐string chromatin architecture in Thermococcus kodakarensis | EMBO Reports
... contributed expertise in archaeal cell culture and chromosome structure; N.A.K. conceived the study, managed the project, ... Bacterial and archaeal cell nucleoids might also be viewed as chromatin [4, 5]. Archaeal cells, in particular those of the ... Schneider KL, Pollard KS, Baertsch R, Pohl A, Lowe TM (2006) The UCSC archaeal genome browser. Nucleic Acids Res 34:D: 407-410 ... Pereira SL, Grayling RA, Lurz R, Reeve JN (1997) Archaeal nucleosomes. Proc Natl Acad Sci USA 94: 12633-12637. ...
  http://embor.embopress.org/content/14/8/711
*  Frontiers | Archaeal Persisters: Persister Cell Formation as a Stress Response in Haloferax volcanii | Microbiology
... this is potentially due to structural differences between bacterial and archaeal signals, and does not discount a quorum ... this is potentially due to structural differences between bacterial and archaeal signals, and does not discount a quorum ... TABLE 1. Toxin-antitoxin loci identified on Haloferax volcanii DS2 chromosome and plasmids. ... Archaeal Persisters: Persister Cell Formation as a Stress Response in Haloferax volcanii. Julianne Megaw and Brendan F. Gilmore ...
  https://www.frontiersin.org/articles/10.3389/fmicb.2017.01589/full
*  Archaeal Flagella
The archaeal flagellum is a unique, 'tail‐like' structure used for motility by single‐celled organisms belonging to the domain ... whereas the A flagellin genes are located elsewhere on the chromosome. ... The archaeal flagellum is a unique, 'tail‐like' structure used for motility by single‐celled organisms belonging to the domain ... Archaeal Flagella. David J VanDyke, Queen's University, Kingston, Ontario, Canada Sandy Y M Ng, Queen's University, Kingston, ...
  http://www.els.net/WileyCDA/ElsArticle/refId-a0000386.html
*  MED: a new non-supervised gene prediction algorithm for bacterial and archaeal genomes | BMC Bioinformatics | Full Text
... the EasyGene web server has provided predictions for hundreds of chromosomes. Therefore, for comparison purpose, EasyGene ... Furthermore, MED 2.0 adapts to a broad range of archaeal genome as well as to bacterial genomes. For archaeal genomes with more ... The bacterial and archaeal genomes and their annotations used in this paper were downloaded from the GenBank Release 149.0 in ... We present the logos of three representative archaeal genomes: M. jannaschii, P. abyssi, and N. equitans in Fig. 2. The logos ...
  https://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-2105-8-97
*  Phylogenomics of Prokaryotic Ribosomal Proteins
An overwhelming majority of archaeal ribosomal protein genes in this study are located on the major chromosomes. Four paralogs ... Proteomic characterization of archaeal ribosomes reveals the presence of novel archaeal-specific ribosomal proteins. J Mol Biol ... Bacterial and archaeal genomes. Genomic data for 995 bacterial and 87 archaeal completely sequenced genomes were retrieved from ... Paralogy and distribution of archaeal r-protein genes across genome partitions. Generally r-proteins in archaeal genomes are ...
  http://pubmedcentralcanada.ca/pmcc/articles/PMC3353972/
*  Frontiers | Archaeal S-Layers: Overview and Current State of the Art | Microbiology
As such, archaeal S-layers represent an area for exploration in both basic and applied research. ... As such, archaeal S-layers represent an area for exploration in both basic and applied research. ... In this review, we summarise current understanding of archaeal S-layer proteins, discussing topics such as structure, lattice ... Information regarding S-layers in the remaining archaeal phyla is limited, mainly due to organism description through only ...
  https://www.frontiersin.org/articles/10.3389/fmicb.2017.02597/full