A DNA helicase that is a component of TRANSCRIPTION FACTOR TFIIH. It plays an essential role in NUCLEOTIDE EXCISION REPAIR, and mutations in this protein are associated with XERODERMA PIGMENTOSUM.
A rare, pigmentary, and atrophic autosomal recessive disease. It is manifested as an extreme photosensitivity to ULTRAVIOLET RAYS as the result of a deficiency in the enzyme that permits excisional repair of ultraviolet-damaged DNA.
A ZINC FINGER MOTIF protein that recognizes and interacts with damaged DNA. It is a DNA-binding protein that plays an essential role in NUCLEOTIDE EXCISION REPAIR. Mutations in this protein are associated with the most severe form of XERODERMA PIGMENTOSUM.
Diseases affecting the orderly growth and persistence of hair.
The reconstruction of a continuous two-stranded DNA molecule without mismatch from a molecule which contained damaged regions. The major repair mechanisms are excision repair, in which defective regions in one strand are excised and resynthesized using the complementary base pairing information in the intact strand; photoreactivation repair, in which the lethal and mutagenic effects of ultraviolet light are eliminated; and post-replication repair, in which the primary lesions are not repaired, but the gaps in one daughter duplex are filled in by incorporation of portions of the other (undamaged) daughter duplex. Excision repair and post-replication repair are sometimes referred to as "dark repair" because they do not require light.
That portion of the electromagnetic spectrum immediately below the visible range and extending into the x-ray frequencies. The longer wavelengths (near-UV or biotic or vital rays) are necessary for the endogenous synthesis of vitamin D and are also called antirachitic rays; the shorter, ionizing wavelengths (far-UV or abiotic or extravital rays) are viricidal, bactericidal, mutagenic, and carcinogenic and are used as disinfectants.
Proteins that catalyze the unwinding of duplex DNA during replication by binding cooperatively to single-stranded regions of DNA or to short regions of duplex DNA that are undergoing transient opening. In addition DNA helicases are DNA-dependent ATPases that harness the free energy of ATP hydrolysis to translocate DNA strands.
Proteins which bind to DNA. The family includes proteins which bind to both double- and single-stranded DNA and also includes specific DNA binding proteins in serum which can be used as markers for malignant diseases.
A syndrome characterized by multiple system abnormalities including DWARFISM; PHOTOSENSITIVITY DISORDERS; PREMATURE AGING; and HEARING LOSS. It is caused by mutations of a number of autosomal recessive genes encoding proteins that involve transcriptional-coupled DNA REPAIR processes. Cockayne syndrome is classified by the severity and age of onset. Type I (classical; CSA) is early childhood onset in the second year of life; type II (congenital; CSB) is early onset at birth with severe symptoms; type III (xeroderma pigmentosum; XP) is late childhood onset with mild symptoms.
Dimers found in DNA chains damaged by ULTRAVIOLET RAYS. They consist of two adjacent PYRIMIDINE NUCLEOTIDES, usually THYMINE nucleotides, in which the pyrimidine residues are covalently joined by a cyclobutane ring. These dimers block DNA REPLICATION.
Injuries to DNA that introduce deviations from its normal, intact structure and which may, if left unrepaired, result in a MUTATION or a block of DNA REPLICATION. These deviations may be caused by physical or chemical agents and occur by natural or unnatural, introduced circumstances. They include the introduction of illegitimate bases during replication or by deamination or other modification of bases; the loss of a base from the DNA backbone leaving an abasic site; single-strand breaks; double strand breaks; and intrastrand (PYRIMIDINE DIMERS) or interstrand crosslinking. Damage can often be repaired (DNA REPAIR). If the damage is extensive, it can induce APOPTOSIS.
Enzymes that catalyze the hydrolysis of the internal bonds and thereby the formation of polynucleotides or oligonucleotides from ribo- or deoxyribonucleotide chains. EC 3.1.-.
A general transcription factor that is involved in basal GENETIC TRANSCRIPTION and NUCLEOTIDE EXCISION REPAIR. It consists of nine subunits including ATP-DEPENDENT DNA HELICASES; CYCLIN H; and XERODERMA PIGMENTOSUM GROUP D PROTEIN.
An alkylating agent that forms DNA ADDUCTS at the C-8 position in GUANINE, resulting in single strand breaks. It has demonstrated carcinogenic action.
Connective tissue cells which secrete an extracellular matrix rich in collagen and other macromolecules.
A deoxyribonucleotide polymer that is the primary genetic material of all cells. Eukaryotic and prokaryotic organisms normally contain DNA in a double-stranded state, yet several important biological processes transiently involve single-stranded regions. DNA, which consists of a polysugar-phosphate backbone possessing projections of purines (adenine and guanine) and pyrimidines (thymine and cytosine), forms a double helix that is held together by hydrogen bonds between these purines and pyrimidines (adenine to thymine and guanine to cytosine).
Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories.
A test used to determine whether or not complementation (compensation in the form of dominance) will occur in a cell with a given mutant phenotype when another mutant genome, encoding the same mutant phenotype, is introduced into that cell.
Any detectable and heritable change in the genetic material that causes a change in the GENOTYPE and which is transmitted to daughter cells and to succeeding generations.
Established cell cultures that have the potential to propagate indefinitely.
A single-stranded DNA-binding protein that is found in EUKARYOTIC CELLS. It is required for DNA REPLICATION; DNA REPAIR; and GENETIC RECOMBINATION.
Tumors or cancer of the SKIN.
The relationship between the dose of administered radiation and the response of the organism or tissue to the radiation.
Autosomal recessive neuroectodermal disorders characterized by brittle sulfur-deficient hair associated with impaired intellect, decreased fertility, and short stature. It may include nail dystrophy, ICHTHYOSIS, and photosensitivity correlated with a NUCLEOTIDE EXCISION REPAIR defect. All individuals with this disorder have a deficiency of cysteine-rich KERATIN-ASSOCIATED PROTEINS found in the interfilamentous matrix. Photosensitive trichothiodystrophy can be caused by mutation in at least 2 separate genes: ERCC2 PROTEIN gene and the related ERCC3. Nonphotosensitive trichothiodystrophy can be caused by mutation in the TTDN1 gene.
The sequence of PURINES and PYRIMIDINES in nucleic acids and polynucleotides. It is also called nucleotide sequence.
Enzymes that are involved in the reconstruction of a continuous two-stranded DNA molecule without mismatch from a molecule, which contained damaged regions.
The process by which a DNA molecule is duplicated.
The first continuously cultured human malignant CELL LINE, derived from the cervical carcinoma of Henrietta Lacks. These cells are used for VIRUS CULTIVATION and antitumor drug screening assays.
The order of amino acids as they occur in a polypeptide chain. This is referred to as the primary structure of proteins. It is of fundamental importance in determining PROTEIN CONFORMATION.
Abnormal responses to sunlight or artificial light due to extreme reactivity of light-absorbing molecules in tissues. It refers almost exclusively to skin photosensitivity, including sunburn, reactions due to repeated prolonged exposure in the absence of photosensitizing factors, and reactions requiring photosensitizing factors such as photosensitizing agents and certain diseases. With restricted reference to skin tissue, it does not include photosensitivity of the eye to light, as in photophobia or photosensitive epilepsy.
A family of structurally related proteins that were originally discovered for their role in cell-cycle regulation in CAENORHABDITIS ELEGANS. They play important roles in regulation of the CELL CYCLE and as components of UBIQUITIN-PROTEIN LIGASES.
Endogenous substances, usually proteins, which are effective in the initiation, stimulation, or termination of the genetic transcription process.
Linear POLYPEPTIDES that are synthesized on RIBOSOMES and may be further modified, crosslinked, cleaved, or assembled into complex proteins with several subunits. The specific sequence of AMINO ACIDS determines the shape the polypeptide will take, during PROTEIN FOLDING, and the function of the protein.

Reconstitution of the transcription factor TFIIH: assignment of functions for the three enzymatic subunits, XPB, XPD, and cdk7. (1/292)

To understand the initiation of the transcription of protein-coding genes, we have dissected the role of the basal transcription/DNA repair factor TFIIH. Having succeeded in reconstituting a functionally active TFIIH from baculovirus recombinant polypeptides, we were able to analyze the role of XPB, XPD, and cdk7 subunits in the transcription reaction. Designing mutated recombinant subunits, we show that the XPB helicase is absolutely required for transcription to open the promoter around the start site whereas the XPD helicase, which is dispensable, stimulates transcription and allows the CAK complex to be anchored to TFIIH. In addition, we also show that cdk7 may phosphorylate the carboxy-terminal domain (CTD) of RNA pol II in the absence of promoter opening.  (+info)

Mutations in XPB and XPD helicases found in xeroderma pigmentosum patients impair the transcription function of TFIIH. (2/292)

As part of TFIIH, XPB and XPD helicases have been shown to play a role in nucleotide excision repair (NER). Mutations in these subunits are associated with three genetic disorders: xeroderma pigmentosum (XP), Cockayne syndrome (CS) and trichothiodystrophy (TTD). The strong heterogeneous clinical features observed in these patients cannot be explained by defects in NER alone. We decided to look at the transcriptional activity of TFIIH from cell lines of XP individuals. We set up an immunopurification procedure to isolate purified TFIIH from patient cell extracts. We demonstrated that mutations in two XP-B/CS patients decrease the transcriptional activity of the corresponding TFIIH by preventing promoter opening. The defect of XPB in transcription can be circumvented by artificial opening of the promoter. Western blot analysis and enzymatic assays indicate that XPD mutations affect the stoichiometric composition of TFIIH due to a weakness in the interaction between XPD-CAK complex and the core TFIIH, resulting in a partial reduction of transcription activity. This work, in addition to clarifying the role of the various TFIIH subunits, supports the current hypothesis that XP-B/D patients are more likely to suffer from transcription repair syndromes rather than DNA repair disorders alone.  (+info)

The Drosophila melanogaster homologue of the Xeroderma pigmentosum D gene product is located in euchromatic regions and has a dynamic response to UV light-induced lesions in polytene chromosomes. (3/292)

The XPD/ERCC2/Rad3 gene is required for excision repair of UV-damaged DNA and is an important component of nucleotide excision repair. Mutations in the XPD gene generate the cancer-prone syndrome, xeroderma pigmentosum, Cockayne's syndrome, and trichothiodystrophy. XPD has a 5'- to 3'-helicase activity and is a component of the TFIIH transcription factor, which is essential for RNA polymerase II elongation. We present here the characterization of the Drosophila melanogaster XPD gene (DmXPD). DmXPD encodes a product that is highly related to its human homologue. The DmXPD protein is ubiquitous during development. In embryos at the syncytial blastoderm stage, DmXPD is cytoplasmic. At the onset of transcription in somatic cells and during gastrulation in germ cells, DmXPD moves to the nuclei. Distribution analysis in polytene chromosomes shows that DmXPD is highly concentrated in the interbands, especially in the highly transcribed regions known as puffs. UV-light irradiation of third-instar larvae induces an increase in the signal intensity and in the number of sites where the DmXPD protein is located in polytene chromosomes, indicating that the DmXPD protein is recruited intensively in the chromosomes as a response to DNA damage. This is the first time that the response to DNA damage by UV-light irradiation can be visualized directly on the chromosomes using one of the TFIIH components.  (+info)

Mouse model for the DNA repair/basal transcription disorder trichothiodystrophy reveals cancer predisposition. (4/292)

Patients with the nucleotide excision repair (NER) disorder xeroderma pigmentosum (XP) are highly predisposed to develop sunlight-induced skin cancer, in remarkable contrast to photosensitive NER-deficient trichothiodystrophy (TTD) patients carrying mutations in the same XPD gene. XPD encodes a helicase subunit of the dually functional DNA repair/basal transcription complex TFIIH. The pleiotropic disease phenotype is hypothesized to be, in part, derived from a repair defect causing UV sensitivity and, in part, from a subtle, viable basal transcription deficiency accounting for the cutaneous, developmental, and the typical brittle hair features of TTD. To understand the relationship between deficient NER and tumor susceptibility, we used a mouse model for TTD that mimics an XPD point mutation of a TTD patient in the mouse germline. Like the fibroblasts from the patient, mouse cells exhibit a partial NER defect, evident from the reduced UV-induced DNA repair synthesis (residual repair capacity approximately 25%), limited recovery of RNA synthesis after UV exposure, and a relatively mild hypersensitivity to cell killing by UV or 7,12-dimethylbenz[a]anthracene. In accordance with the cellular studies, TTD mice exhibit a modestly increased sensitivity to UV-induced inflammation and hyperplasia of the skin. In striking contrast to the human syndrome, TTD mice manifest a dear susceptibility to UV- and 7,12-dimethylbenz[a]anthracene-induced skin carcinogenesis, albeit not as pronounced as the totally NER-deficient XPA mice. These findings open up the possibility that TTD is associated with a so far unnoticed cancer predisposition and support the notion that a NER deficiency enhances cancer susceptibility. These findings have important implications for the etiology of the human disorder and for the impact of NER on carcinogenesis.  (+info)

Drug-induced apoptosis is delayed and reduced in XPD lymphoblastoid cell lines: possible role of TFIIH in p53-mediated apoptotic cell death. (5/292)

The tumor suppressor gene product p53 can bind to and inhibit the helicase activity of the multisubunit transcription-repair factor TFIIH. We previously reported that p53-mediated apoptosis is attenuated in primary human fibroblasts from individuals with Xeroderma Pigmentosum (XP) that harbor mutations in the TFIIH DNA helicases XPD or XPB. In this study we show that apoptosis is reduced and delayed in three XPD lymphoblastoid cell lines (LCLs), but not in an XPD heterozygote LCL, after exposure to doxorubicin, a DNA-damaging agent and topoisomerase II inhibitor frequently used in cancer therapy. Apoptosis was assessed by quantitation of Annexin V binding to exposed phosphatidylserine residues and by caspase-mediated cleavage of Poly(ADP)Ribose Polymerase (PARP). Apoptosis induced by doxorubicin was suppressed in LCLs retrovirally transduced with the Human Papillomavirus 16 E6 oncoprotein, consistent with the hypothesis that this is a p53-dependent process. PARP cleavage was not delayed in XPD LCLs in response to anti-Fas (CD95) antibody-mediated apoptosis, thus, the defect in the apoptotic pathway in these cells lies upstream of caspase activation. Similar changes in the expression of apoptosis-effector genes, p53, and p53-responsive genes p21Cip1/WAF-1/Sid1 (p21), gadd45, bcl-2 and bax were observed in normal and XPD LCLs after treatment with doxorubicin, indicating that delayed apoptosis was not a consequence of defective transcription of these genes. Thus, our studies provide further support to the hypothesis that XPD and p53 can functionally interact in a p53-mediated apoptotic pathway.  (+info)

Extraneuronal monoamine transporter expression and DNA repair vis-a-vis 2-chloroethyl-3-sarcosinamide-1-nitrosourea cytotoxicity in human tumor cell lines. (6/292)

We previously found that 2-chloroethyl-3-sarcosin-amide-1-nitrosourea (SarCNU), a new chloroethylnitrosourea analogue presently in phase I clinical trials, is a selective cytotoxin that enters cells via the extraneuronal transporter for monoamine transmitters (EMT). In this study, we assessed whether EMT expression correlates with SarCNU cytotoxicity by determining EMT expression in 23 human tumor cell lines with reverse-transcription PCR. Western blot analysis was used to measure protein levels of the DNA repair genes, O6-methylguanine-DNA methyltransferase (MGMT), and excision repair cross-complementing rodent repair deficiency gene 2 (ERCC2). SarCNU cytotoxicity was determined by the sulforhodamine B colorimetric anti-cancer-drug screening assay and correlated with gene expression. Almost all of the cell lines screened were positive for EMT expression. However, seven cell lines (MGR-1, MGR-2, T98-G, SKI-1, SKNSH, 297, and GBM) expressed low levels of EMT. Although there was no linear correlation between SarCNU cytotoxicity and EMT expression, SarCNU cytotoxicity significantly correlated with ERCC2 protein levels, and MGMT-rich (Mer+) cell lines (MGMT protein level >0.1) were more resistant to SarCNU than MGMT-poor (Mer-) cell lines (MGMT protein level <0.1). Moreover, multiple regression analysis indicated that the best correlation with SarCNU cytotoxicity was attainable with EMT plus MGMT and ERCC2 expression. This study suggests that in human tumor cell lines both EMT and DNA repair factors, specifically, MGMT and ERCC2, are important determinants of SarCNU activity. Because EMT is expressed in a wide variety of human tumors, SarCNU should be a more widely effective alternative chemotherapeutic agent.  (+info)

TFIIH with inactive XPD helicase functions in transcription initiation but is defective in DNA repair. (7/292)

TFIIH is a multisubunit protein complex involved in RNA polymerase II transcription and nucleotide excision repair, which removes a wide variety of DNA lesions including UV-induced photoproducts. Mutations in the DNA-dependent ATPase/helicase subunits of TFIIH, XPB and XPD, are associated with three inherited syndromes as follows: xeroderma pigmentosum with or without Cockayne syndrome and trichothiodystrophy. By using epitope-tagged XPD we purified mammalian TFIIH carrying a wild type or an active-site mutant XPD subunit. Contrary to XPB, XPD helicase activity was dispensable for in vitro transcription, catalytic formation of trinucleotide transcripts, and promoter opening. Moreover, in contrast to XPB, microinjection of mutant XPD cDNA did not interfere with in vivo transcription. These data show directly that XPD activity is not required for transcription. However, during DNA repair, neither 5' nor 3' incisions in defined positions around a DNA adduct were detected in the presence of TFIIH containing inactive XPD, although substantial damage-dependent DNA synthesis was induced by the presence of mutant XPD both in cells and cell extracts. The aberrant damage-dependent DNA synthesis caused by the mutant XPD does not lead to effective repair, consistent with the discrepancy between repair synthesis and survival in cells from a number of XP-D patients.  (+info)

The cancer-free phenotype in trichothiodystrophy is unrelated to its repair defect. (8/292)

The DNA repair-deficient genetic disorders xeroderma pigmentosum (XP) and trichothiodystrophy (TTD) can both result from mutations in the XPD gene, the sites of the mutations differing between the two disorders. The hallmarks of XP are multiple pigmentation changes in the skin and a greatly elevated frequency of skin cancers, characteristics that are not seen in TTD. XP-D and most TTD patients have reduced levels of DNA repair, but some recent reports have suggested that the repair deficiencies in TTD cells are milder than in XP-D cells. We reported recently that inhibition of intracellular adhesion molecule-1 (ICAM-1) expression by UVB irradiation was similar in normal and TTD cells but increased in XP-D cells, suggesting a correlation between ICAM-1 inhibition and cancer proneness. In the first part of the current work, we have extended these studies and found several other examples, including XP-G and Cockayne syndrome cells, in which increased ICAM-1 inhibition correlated with cancer proneness. However, we also discovered that a subset of TTD cells, in which arg112 in the NH2-terminal region of the XPD protein is mutated to histidine, had an ICAM-1 response similar to that of XP-D cells. In the second part of the work, we have shown that TTD cells with this specific NH2-terminal mutation are more sensitive to UV irradiation than other TTDs, most of which are mutated in the COOH-terminal region, and are indistinguishable from XP-D cells in cell killing, incision breaks, and repair of cyclobutane pyrimidine dimers. Because the clinical phenotypes of these patients do not obviously differ from those of TTDs with mutations at other sites, we conclude that the lack of skin abnormalities in TTD is independent of the defective cellular responses to UV. It is likely to result from a transcriptional defect, which prevents the skin abnormalities from being expressed.  (+info)

Xeroderma Pigmentosum Group D Protein, also known as XPD protein, is a component of the nucleotide excision repair complex (NER) in humans. The NER complex is responsible for repairing damaged DNA, including DNA that has been damaged by ultraviolet (UV) light.

The XPD protein is an ATP-dependent helicase that unwinds double-stranded DNA during the NER process. Mutations in the gene that encodes the XPD protein can lead to a genetic disorder called xeroderma pigmentosum (XP), which is characterized by increased sensitivity to UV light and a high risk of skin cancer.

There are several subtypes of XP, and mutations in the XPD gene can cause XP group D. This form of XP is also associated with progressive neurodegeneration and cognitive impairment. The exact mechanism by which XPD mutations lead to these neurological symptoms is not fully understood, but it is thought to be related to defects in transcription-coupled repair (TCR), a subpathway of NER that preferentially repairs DNA damage in the transcribed strand of active genes.

Xeroderma Pigmentosum (XP) is a rare, genetic disorder that affects the body's ability to repair damage to DNA caused by ultraviolet (UV) radiation from sunlight. The condition results in extreme sensitivity to UV light. People with XP develop freckles and moles on sun-exposed skin at an early age, and are prone to developing various forms of skin cancer. In severe cases, the disease may also affect the eyes and nervous system.

The disorder is caused by mutations in genes that are responsible for repairing damaged DNA. If not diagnosed and managed properly, XP can lead to serious health complications, including disability and death. Treatment typically involves strict sun protection measures, such as avoiding sunlight, using sunscreen, wearing protective clothing, and in some cases, medication or surgery.

Xeroderma Pigmentosum Group A Protein, also known as XPA protein, is a crucial component of the nucleotide excision repair (NER) pathway in humans. The NER pathway is responsible for repairing damaged DNA, including DNA that has been damaged by ultraviolet (UV) light.

XPA protein plays a central role in the NER process by serving as a scaffold that helps to coordinate and regulate the activity of other NER proteins. XPA protein binds directly to the damaged DNA site, helping to recruit and position other NER proteins for efficient repair.

Mutations in the XPA gene can lead to Xeroderma Pigmentosum (XP), a rare genetic disorder characterized by extreme sensitivity to UV light. Individuals with XP are prone to developing skin cancer and other forms of cancer at an early age due to their inability to repair DNA damage caused by UV light.

Hair diseases is a broad term that refers to various medical conditions affecting the hair shaft, follicle, or scalp. These conditions can be categorized into several types, including:

1. Hair shaft abnormalities: These are conditions that affect the structure and growth of the hair shaft. Examples include trichorrhexis nodosa, where the hair becomes weak and breaks easily, and pili torti, where the hair shaft is twisted and appears sparse and fragile.
2. Hair follicle disorders: These are conditions that affect the hair follicles, leading to hair loss or abnormal growth patterns. Examples include alopecia areata, an autoimmune disorder that causes patchy hair loss, and androgenetic alopecia, a genetic condition that leads to pattern baldness in both men and women.
3. Scalp disorders: These are conditions that affect the scalp, leading to symptoms such as itching, redness, scaling, or pain. Examples include seborrheic dermatitis, psoriasis, and tinea capitis (ringworm of the scalp).
4. Hair cycle abnormalities: These are conditions that affect the normal growth cycle of the hair, leading to excessive shedding or thinning. Examples include telogen effluvium, where a large number of hairs enter the resting phase and fall out, and anagen effluvium, which is typically caused by chemotherapy or radiation therapy.
5. Infectious diseases: Hair follicles can become infected with various bacteria, viruses, or fungi, leading to conditions such as folliculitis, furunculosis, and kerion.
6. Genetic disorders: Some genetic disorders can affect the hair, such as Menkes syndrome, which is a rare inherited disorder that affects copper metabolism and leads to kinky, sparse, and brittle hair.

Proper diagnosis and treatment of hair diseases require consultation with a healthcare professional, often a dermatologist or a trichologist who specializes in hair and scalp disorders.

DNA repair is the process by which cells identify and correct damage to the DNA molecules that encode their genome. DNA can be damaged by a variety of internal and external factors, such as radiation, chemicals, and metabolic byproducts. If left unrepaired, this damage can lead to mutations, which may in turn lead to cancer and other diseases.

There are several different mechanisms for repairing DNA damage, including:

1. Base excision repair (BER): This process repairs damage to a single base in the DNA molecule. An enzyme called a glycosylase removes the damaged base, leaving a gap that is then filled in by other enzymes.
2. Nucleotide excision repair (NER): This process repairs more severe damage, such as bulky adducts or crosslinks between the two strands of the DNA molecule. An enzyme cuts out a section of the damaged DNA, and the gap is then filled in by other enzymes.
3. Mismatch repair (MMR): This process repairs errors that occur during DNA replication, such as mismatched bases or small insertions or deletions. Specialized enzymes recognize the error and remove a section of the newly synthesized strand, which is then replaced by new nucleotides.
4. Double-strand break repair (DSBR): This process repairs breaks in both strands of the DNA molecule. There are two main pathways for DSBR: non-homologous end joining (NHEJ) and homologous recombination (HR). NHEJ directly rejoins the broken ends, while HR uses a template from a sister chromatid to repair the break.

Overall, DNA repair is a crucial process that helps maintain genome stability and prevent the development of diseases caused by genetic mutations.

According to the medical definition, ultraviolet (UV) rays are invisible radiations that fall in the range of the electromagnetic spectrum between 100-400 nanometers. UV rays are further divided into three categories: UVA (320-400 nm), UVB (280-320 nm), and UVC (100-280 nm).

UV rays have various sources, including the sun and artificial sources like tanning beds. Prolonged exposure to UV rays can cause damage to the skin, leading to premature aging, eye damage, and an increased risk of skin cancer. UVA rays penetrate deeper into the skin and are associated with skin aging, while UVB rays primarily affect the outer layer of the skin and are linked to sunburns and skin cancer. UVC rays are the most harmful but fortunately, they are absorbed by the Earth's atmosphere and do not reach the surface.

Healthcare professionals recommend limiting exposure to UV rays, wearing protective clothing, using broad-spectrum sunscreen with an SPF of at least 30, and avoiding tanning beds to reduce the risk of UV-related health problems.

DNA helicases are a group of enzymes that are responsible for separating the two strands of DNA during processes such as replication and transcription. They do this by unwinding the double helix structure of DNA, using energy from ATP to break the hydrogen bonds between the base pairs. This allows other proteins to access the individual strands of DNA and carry out functions such as copying the genetic code or transcribing it into RNA.

During replication, DNA helicases help to create a replication fork, where the two strands of DNA are separated and new complementary strands are synthesized. In transcription, DNA helicases help to unwind the DNA double helix at the promoter region, allowing the RNA polymerase enzyme to bind and begin transcribing the DNA into RNA.

DNA helicases play a crucial role in maintaining the integrity of the genetic code and are essential for the normal functioning of cells. Defects in DNA helicases have been linked to various diseases, including cancer and neurological disorders.

DNA-binding proteins are a type of protein that have the ability to bind to DNA (deoxyribonucleic acid), the genetic material of organisms. These proteins play crucial roles in various biological processes, such as regulation of gene expression, DNA replication, repair and recombination.

The binding of DNA-binding proteins to specific DNA sequences is mediated by non-covalent interactions, including electrostatic, hydrogen bonding, and van der Waals forces. The specificity of binding is determined by the recognition of particular nucleotide sequences or structural features of the DNA molecule.

DNA-binding proteins can be classified into several categories based on their structure and function, such as transcription factors, histones, and restriction enzymes. Transcription factors are a major class of DNA-binding proteins that regulate gene expression by binding to specific DNA sequences in the promoter region of genes and recruiting other proteins to modulate transcription. Histones are DNA-binding proteins that package DNA into nucleosomes, the basic unit of chromatin structure. Restriction enzymes are DNA-binding proteins that recognize and cleave specific DNA sequences, and are widely used in molecular biology research and biotechnology applications.

Cockayne Syndrome is a rare genetic disorder that affects the body's ability to repair DNA. It is characterized by progressive growth failure, neurological abnormalities, and premature aging. The syndrome is typically diagnosed in childhood and is often associated with photosensitivity, meaning that affected individuals are unusually sensitive to sunlight.

Cockayne Syndrome is caused by mutations in either the ERCC6 or ERCC8 gene, which are involved in the repair of damaged DNA. There are two types of Cockayne Syndrome: Type I and Type II. Type I is the more common form and is characterized by normal development during the first year of life followed by progressive growth failure, neurological abnormalities, and premature aging. Type II is a more severe form that is apparent at birth or within the first few months of life and is associated with severe developmental delays, intellectual disability, and early death.

There is no cure for Cockayne Syndrome, and treatment is focused on managing symptoms and improving quality of life. This may include physical therapy, occupational therapy, speech therapy, and special education services. In some cases, medications may be used to treat specific symptoms such as seizures or gastrointestinal problems.

Pyrimidine dimers are a type of DNA lesion that form when two adjacent pyrimidine bases on the same strand of DNA become covalently linked, usually as a result of exposure to ultraviolet (UV) light. The most common type of pyrimidine dimer is the cyclobutane pyrimidine dimer (CPD), which forms when two thymine bases are linked together in a cyclobutane ring structure.

Pyrimidine dimers can distort the DNA helix and interfere with normal replication and transcription processes, leading to mutations and potentially cancer. The formation of pyrimidine dimers is a major mechanism by which UV radiation causes skin damage and increases the risk of skin cancer.

The body has several mechanisms for repairing pyrimidine dimers, including nucleotide excision repair (NER) and base excision repair (BER). However, if these repair mechanisms are impaired or overwhelmed, pyrimidine dimers can persist and contribute to the development of cancer.

DNA damage refers to any alteration in the structure or composition of deoxyribonucleic acid (DNA), which is the genetic material present in cells. DNA damage can result from various internal and external factors, including environmental exposures such as ultraviolet radiation, tobacco smoke, and certain chemicals, as well as normal cellular processes such as replication and oxidative metabolism.

Examples of DNA damage include base modifications, base deletions or insertions, single-strand breaks, double-strand breaks, and crosslinks between the two strands of the DNA helix. These types of damage can lead to mutations, genomic instability, and chromosomal aberrations, which can contribute to the development of diseases such as cancer, neurodegenerative disorders, and aging-related conditions.

The body has several mechanisms for repairing DNA damage, including base excision repair, nucleotide excision repair, mismatch repair, and double-strand break repair. However, if the damage is too extensive or the repair mechanisms are impaired, the cell may undergo apoptosis (programmed cell death) to prevent the propagation of potentially harmful mutations.

Endonucleases are enzymes that cleave, or cut, phosphodiester bonds within a polynucleotide chain, specifically within the same molecule of DNA or RNA. They can be found in all living organisms and play crucial roles in various biological processes, such as DNA replication, repair, and recombination.

Endonucleases can recognize specific nucleotide sequences (sequence-specific endonucleases) or have no sequence preference (non-specific endonucleases). Some endonucleases generate sticky ends, overhangs of single-stranded DNA after cleavage, while others produce blunt ends without any overhang.

These enzymes are widely used in molecular biology techniques, such as restriction digestion, cloning, and genome editing (e.g., CRISPR-Cas9 system). Restriction endonucleases recognize specific DNA sequences called restriction sites and cleave the phosphodiester bonds at or near these sites, generating defined fragment sizes that can be separated by agarose gel electrophoresis. This property is essential for various applications in genetic engineering and biotechnology.

Transcription Factor IIH (TFIIH) is a multi-subunit protein complex that plays a crucial role in the process of transcription, which is the synthesis of RNA from DNA. Specifically, TFIIH is involved in the initiation phase of transcription for protein-coding genes in eukaryotic cells.

TFIIH has two main enzymatic activities: helicase and kinase. The helicase activity is provided by the XPB and XPD subunits, which are responsible for unwinding the DNA double helix at the transcription start site. This creates a single-stranded DNA template for the RNA polymerase II (Pol II) enzyme to bind and begin transcribing the gene.

The kinase activity of TFIIH is provided by the CAK subcomplex, which consists of the CDK7, Cyclin H, and MAT1 proteins. This kinase phosphorylates the carboxy-terminal domain (CTD) of the largest subunit of Pol II, leading to the recruitment of additional transcription factors and the initiation of RNA synthesis.

In addition to its role in transcription, TFIIH is also involved in DNA repair processes, particularly nucleotide excision repair (NER). During NER, TFIIH helps to recognize and remove damaged DNA lesions, such as those caused by UV radiation or chemical mutagens. The XPB and XPD subunits of TFIIH are essential for this process, as they help to unwind the DNA around the damage site and create a bubble structure that allows other repair factors to access and fix the lesion.

Mutations in the genes encoding various subunits of TFIIH can lead to several human diseases, including xeroderma pigmentosum (XP), Cockayne syndrome (CS), trichothiodystrophy (TTD), and combined XP/CS/TTD. These disorders are characterized by increased sensitivity to UV radiation, developmental abnormalities, and neurological dysfunction.

Acetoxyacetylaminofluorene is not a medical term, but a chemical compound. It's a derivative of the carcinogen N-acetyl-N-hydroxy-2-acetylaminofluorene, which has been used in research to study chemical carcinogenesis and mutagenesis.

The compound Acetoxyacetylaminofluorene is relatively unstable and can be hydrolyzed to release the active metabolite N-hydroxy-2-acetylaminofluorene, which can then interact with DNA and lead to the formation of DNA adducts. These adducts can cause mutations and contribute to the carcinogenic effects of this compound.

It's important to note that Acetoxyacetylaminofluorene is not used in medical treatments or therapies, and its use is limited to research purposes only.

Fibroblasts are specialized cells that play a critical role in the body's immune response and wound healing process. They are responsible for producing and maintaining the extracellular matrix (ECM), which is the non-cellular component present within all tissues and organs, providing structural support and biochemical signals for surrounding cells.

Fibroblasts produce various ECM proteins such as collagens, elastin, fibronectin, and laminins, forming a complex network of fibers that give tissues their strength and flexibility. They also help in the regulation of tissue homeostasis by controlling the turnover of ECM components through the process of remodeling.

In response to injury or infection, fibroblasts become activated and start to proliferate rapidly, migrating towards the site of damage. Here, they participate in the inflammatory response, releasing cytokines and chemokines that attract immune cells to the area. Additionally, they deposit new ECM components to help repair the damaged tissue and restore its functionality.

Dysregulation of fibroblast activity has been implicated in several pathological conditions, including fibrosis (excessive scarring), cancer (where they can contribute to tumor growth and progression), and autoimmune diseases (such as rheumatoid arthritis).

Deoxyribonucleic acid (DNA) is the genetic material present in the cells of organisms where it is responsible for the storage and transmission of hereditary information. DNA is a long molecule that consists of two strands coiled together to form a double helix. Each strand is made up of a series of four nucleotide bases - adenine (A), guanine (G), cytosine (C), and thymine (T) - that are linked together by phosphate and sugar groups. The sequence of these bases along the length of the molecule encodes genetic information, with A always pairing with T and C always pairing with G. This base-pairing allows for the replication and transcription of DNA, which are essential processes in the functioning and reproduction of all living organisms.

Molecular sequence data refers to the specific arrangement of molecules, most commonly nucleotides in DNA or RNA, or amino acids in proteins, that make up a biological macromolecule. This data is generated through laboratory techniques such as sequencing, and provides information about the exact order of the constituent molecules. This data is crucial in various fields of biology, including genetics, evolution, and molecular biology, allowing for comparisons between different organisms, identification of genetic variations, and studies of gene function and regulation.

A genetic complementation test is a laboratory procedure used in molecular genetics to determine whether two mutated genes can complement each other's function, indicating that they are located at different loci and represent separate alleles. This test involves introducing a normal or wild-type copy of one gene into a cell containing a mutant version of the same gene, and then observing whether the presence of the normal gene restores the normal function of the mutated gene. If the introduction of the normal gene results in the restoration of the normal phenotype, it suggests that the two genes are located at different loci and can complement each other's function. However, if the introduction of the normal gene does not restore the normal phenotype, it suggests that the two genes are located at the same locus and represent different alleles of the same gene. This test is commonly used to map genes and identify genetic interactions in a variety of organisms, including bacteria, yeast, and animals.

A mutation is a permanent change in the DNA sequence of an organism's genome. Mutations can occur spontaneously or be caused by environmental factors such as exposure to radiation, chemicals, or viruses. They may have various effects on the organism, ranging from benign to harmful, depending on where they occur and whether they alter the function of essential proteins. In some cases, mutations can increase an individual's susceptibility to certain diseases or disorders, while in others, they may confer a survival advantage. Mutations are the driving force behind evolution, as they introduce new genetic variability into populations, which can then be acted upon by natural selection.

A cell line is a culture of cells that are grown in a laboratory for use in research. These cells are usually taken from a single cell or group of cells, and they are able to divide and grow continuously in the lab. Cell lines can come from many different sources, including animals, plants, and humans. They are often used in scientific research to study cellular processes, disease mechanisms, and to test new drugs or treatments. Some common types of human cell lines include HeLa cells (which come from a cancer patient named Henrietta Lacks), HEK293 cells (which come from embryonic kidney cells), and HUVEC cells (which come from umbilical vein endothelial cells). It is important to note that cell lines are not the same as primary cells, which are cells that are taken directly from a living organism and have not been grown in the lab.

Replication Protein A (RPA) is a single-stranded DNA binding protein complex that plays a crucial role in the process of DNA replication, repair, and recombination. In eukaryotic cells, RPA is composed of three subunits: RPA70, RPA32, and RPA14. The primary function of RPA is to coat single-stranded DNA (ssDNA) generated during these processes, protecting it from degradation, preventing the formation of secondary structures, and promoting the recruitment of other proteins involved in DNA metabolism.

RPA binds ssDNA with high affinity and specificity, forming a stable complex that protects the DNA from nucleases, chemical modifications, and other damaging agents. The protein also participates in the regulation of various enzymatic activities, such as helicase loading and activation, end processing, and polymerase processivity.

During DNA replication, RPA is essential for the initiation and elongation phases. It facilitates the assembly of the pre-replicative complex (pre-RC) at origins of replication, aids in the recruitment and activation of helicases, and promotes the switch from MCM2-7 helicase to polymerase processivity during DNA synthesis.

In addition to its role in DNA replication, RPA is involved in various DNA repair pathways, including nucleotide excision repair (NER), base excision repair (BER), mismatch repair (MMR), and double-strand break repair (DSBR). It also plays a critical role in meiotic recombination during sexual reproduction.

In summary, Replication Protein A (RPA) is a eukaryotic single-stranded DNA binding protein complex that protects, stabilizes, and regulates ssDNA during DNA replication, repair, and recombination processes.

Skin neoplasms refer to abnormal growths or tumors in the skin that can be benign (non-cancerous) or malignant (cancerous). They result from uncontrolled multiplication of skin cells, which can form various types of lesions. These growths may appear as lumps, bumps, sores, patches, or discolored areas on the skin.

Benign skin neoplasms include conditions such as moles, warts, and seborrheic keratoses, while malignant skin neoplasms are primarily classified into melanoma, squamous cell carcinoma, and basal cell carcinoma. These three types of cancerous skin growths are collectively known as non-melanoma skin cancers (NMSCs). Melanoma is the most aggressive and dangerous form of skin cancer, while NMSCs tend to be less invasive but more common.

It's essential to monitor any changes in existing skin lesions or the appearance of new growths and consult a healthcare professional for proper evaluation and treatment if needed.

A dose-response relationship in radiation refers to the correlation between the amount of radiation exposure (dose) and the biological response or adverse health effects observed in exposed individuals. As the level of radiation dose increases, the severity and frequency of the adverse health effects also tend to increase. This relationship is crucial in understanding the risks associated with various levels of radiation exposure and helps inform radiation protection standards and guidelines.

The effects of ionizing radiation can be categorized into two types: deterministic and stochastic. Deterministic effects have a threshold dose below which no effect is observed, and above this threshold, the severity of the effect increases with higher doses. Examples include radiation-induced cataracts or radiation dermatitis. Stochastic effects, on the other hand, do not have a clear threshold and are based on probability; as the dose increases, so does the likelihood of the adverse health effect occurring, such as an increased risk of cancer.

Understanding the dose-response relationship in radiation exposure is essential for setting limits on occupational and public exposure to ionizing radiation, optimizing radiation protection practices, and developing effective medical countermeasures in case of radiation emergencies.

Trichothiodystrophy (TTD) syndromes are a group of rare genetic disorders characterized by brittle, sparse, and easily breakable hair due to abnormal sulfur content. The syndromes can also involve various other symptoms such as intellectual disability, developmental delays, ichthyosis (dry, scaly skin), nail abnormalities, short stature, and increased sensitivity to light. TTD syndromens are caused by mutations in genes involved in DNA repair, particularly the ERCC2 and ERCC3 genes. These genetic defects lead to impaired DNA repair and decreased UV protection, which can result in increased risk of skin cancer. The condition is usually present from birth or early childhood and affects both males and females equally.

A base sequence in the context of molecular biology refers to the specific order of nucleotides in a DNA or RNA molecule. In DNA, these nucleotides are adenine (A), guanine (G), cytosine (C), and thymine (T). In RNA, uracil (U) takes the place of thymine. The base sequence contains genetic information that is transcribed into RNA and ultimately translated into proteins. It is the exact order of these bases that determines the genetic code and thus the function of the DNA or RNA molecule.

DNA repair enzymes are a group of enzymes that are responsible for identifying and correcting damage to the DNA molecule. These enzymes play a critical role in maintaining the integrity of an organism's genetic material, as they help to ensure that the information stored in DNA is accurately transmitted during cell division and reproduction.

There are several different types of DNA repair enzymes, each responsible for correcting specific types of damage. For example, base excision repair enzymes remove and replace damaged or incorrect bases, while nucleotide excision repair enzymes remove larger sections of damaged DNA and replace them with new nucleotides. Other types of DNA repair enzymes include mismatch repair enzymes, which correct errors that occur during DNA replication, and double-strand break repair enzymes, which are responsible for fixing breaks in both strands of the DNA molecule.

Defects in DNA repair enzymes have been linked to a variety of diseases, including cancer, neurological disorders, and premature aging. For example, individuals with xeroderma pigmentosum, a rare genetic disorder characterized by an increased risk of skin cancer, have mutations in genes that encode nucleotide excision repair enzymes. Similarly, defects in mismatch repair enzymes have been linked to hereditary nonpolyposis colorectal cancer, a type of colon cancer that is inherited and tends to occur at a younger age than sporadic colon cancer.

Overall, DNA repair enzymes play a critical role in maintaining the stability and integrity of an organism's genetic material, and defects in these enzymes can have serious consequences for human health.

DNA replication is the biological process by which DNA makes an identical copy of itself during cell division. It is a fundamental mechanism that allows genetic information to be passed down from one generation of cells to the next. During DNA replication, each strand of the double helix serves as a template for the synthesis of a new complementary strand. This results in the creation of two identical DNA molecules. The enzymes responsible for DNA replication include helicase, which unwinds the double helix, and polymerase, which adds nucleotides to the growing strands.

HeLa cells are a type of immortalized cell line used in scientific research. They are derived from a cancer that developed in the cervical tissue of Henrietta Lacks, an African-American woman, in 1951. After her death, cells taken from her tumor were found to be capable of continuous division and growth in a laboratory setting, making them an invaluable resource for medical research.

HeLa cells have been used in a wide range of scientific studies, including research on cancer, viruses, genetics, and drug development. They were the first human cell line to be successfully cloned and are able to grow rapidly in culture, doubling their population every 20-24 hours. This has made them an essential tool for many areas of biomedical research.

It is important to note that while HeLa cells have been instrumental in numerous scientific breakthroughs, the story of their origin raises ethical questions about informed consent and the use of human tissue in research.

An amino acid sequence is the specific order of amino acids in a protein or peptide molecule, formed by the linking of the amino group (-NH2) of one amino acid to the carboxyl group (-COOH) of another amino acid through a peptide bond. The sequence is determined by the genetic code and is unique to each type of protein or peptide. It plays a crucial role in determining the three-dimensional structure and function of proteins.

Photosensitivity disorders refer to conditions that cause an abnormal reaction to sunlight or artificial light. This reaction can take the form of various skin changes, such as rashes, inflammation, or pigmentation, and in some cases, it can also lead to systemic symptoms like fatigue, fever, or joint pain.

The two main types of photosensitivity disorders are:

1. Phototoxic reactions: These occur when a substance (such as certain medications, chemicals, or plants) absorbs light energy and transfers it to skin cells, causing damage and inflammation. The reaction typically appears within 24 hours of exposure to the light source and can resemble a sunburn.

2. Photoallergic reactions: These occur when the immune system responds to the combination of light and a particular substance, leading to an allergic response. The reaction may not appear until several days after initial exposure and can cause redness, itching, and blistering.

It is important for individuals with photosensitivity disorders to avoid excessive sun exposure, wear protective clothing, and use broad-spectrum sunscreens with a high SPF rating to minimize the risk of phototoxic or photoallergic reactions.

Cullin proteins are a family of structurally related proteins that play a crucial role in the function of E3 ubiquitin ligase complexes. These complexes are responsible for targeting specific cellular proteins for degradation by the proteasome, which is a key process in maintaining protein homeostasis within cells.

Cullin proteins act as scaffolds that bring together different components of the E3 ubiquitin ligase complex, including RING finger proteins and substrate receptors. There are several different cullin proteins identified in humans (CUL1, CUL2, CUL3, CUL4A, CUL4B, CUL5, and CUL7), each of which can form distinct E3 ubiquitin ligase complexes with unique substrate specificities.

The regulation of cullin proteins is critical for normal cellular function, and dysregulation of these proteins has been implicated in various diseases, including cancer. For example, mutations in CUL1 have been found in certain types of breast and ovarian cancers, while alterations in CUL3 have been linked to neurodegenerative disorders such as Parkinson's disease.

Overall, cullin proteins are essential components of the ubiquitin-proteasome system, which plays a critical role in regulating protein turnover and maintaining cellular homeostasis.

Transcription factors are proteins that play a crucial role in regulating gene expression by controlling the transcription of DNA to messenger RNA (mRNA). They function by binding to specific DNA sequences, known as response elements, located in the promoter region or enhancer regions of target genes. This binding can either activate or repress the initiation of transcription, depending on the properties and interactions of the particular transcription factor. Transcription factors often act as part of a complex network of regulatory proteins that determine the precise spatiotemporal patterns of gene expression during development, differentiation, and homeostasis in an organism.

Proteins are complex, large molecules that play critical roles in the body's functions. They are made up of amino acids, which are organic compounds that are the building blocks of proteins. Proteins are required for the structure, function, and regulation of the body's tissues and organs. They are essential for the growth, repair, and maintenance of body tissues, and they play a crucial role in many biological processes, including metabolism, immune response, and cellular signaling. Proteins can be classified into different types based on their structure and function, such as enzymes, hormones, antibodies, and structural proteins. They are found in various foods, especially animal-derived products like meat, dairy, and eggs, as well as plant-based sources like beans, nuts, and grains.

"Xeroderma pigmentosum group C protein complex is the initiator of global genome nucleotide excision repair". Molecular Cell. 2 ... Xeroderma pigmentosum was first described in the 1870s by Moritz Kaposi. In 1882, Kaposi coined the term xeroderma pigmentosum ... "Xeroderma Pigmentosum". NORD (National Organization for Rare Disorders). 2017. Retrieved 28 June 2018. "Xeroderma pigmentosum ... Xeroderma pigmentosum was first described in 1874 by Hebra and Moritz Kaposi. In 1882, Kaposi coined the term xeroderma ...
Shimizu Y, Iwai S, Hanaoka F, Sugasawa K (January 2003). "Xeroderma pigmentosum group C protein interacts physically and ... It was discovered that a mutation in the ABCA1 protein is responsible for causing Tangier disease by several groups in 1998. ... Since this protein is needed throughout the body it is expressed ubiquitously as a 220 kDa protein. It is present in higher ... Gerd Schmitz's group in Germany and Michael Hayden's group in British Columbia were using standard genetics techniques and DNA ...
Shimizu Y, Iwai S, Hanaoka F, Sugasawa K (Jan 2003). "Xeroderma pigmentosum group C protein interacts physically and ... "Xeroderma pigmentosum group C protein complex is the initiator of global genome nucleotide excision repair". Molecular Cell. 2 ... "Purification and cloning of a nucleotide excision repair complex involving the xeroderma pigmentosum group C protein and a ... "Centrosome protein centrin 2/caltractin 1 is part of the xeroderma pigmentosum group C complex that initiates global genome ...
Xeroderma pigmentosum, complementation group C, also known as XPC, is a protein which in humans is encoded by the XPC gene. XPC ... XPC xeroderma pigmentosum, complementation group C". "OMIM Entry - # 278720 - XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C; ... Yokoi M, Masutani C, Maekawa T, Sugasawa K, Ohkuma Y, Hanaoka F (2000). "The xeroderma pigmentosum group C protein complex XPC- ... Yokoi M, Masutani C, Maekawa T, Sugasawa K, Ohkuma Y, Hanaoka F (March 2000). "The xeroderma pigmentosum group C protein ...
Shimizu Y, Iwai S, Hanaoka F, Sugasawa K (2003). "Xeroderma pigmentosum group C protein interacts physically and functionally ... Several bacterial proteins have strong sequence homology with this protein. The protein encoded by this gene belongs to the TDG ... Promyelocytic leukemia protein, SUMO3, and Small ubiquitin-related modifier 1. Click on genes, proteins and metabolites below ... 2004). "Analysis of a high-throughput yeast two-hybrid system and its use to predict the function of intracellular proteins ...
... the XPG-I is a protein domain found on Xeroderma Pigmentosum Complementation Group G (XPG) protein. The XPG protein is an ... Mutations in the protein commonly cause Xeroderma Pigmentosum which often lead to skin cancer. The function of the internal XPG ... This article incorporates text from the public domain Pfam and InterPro: IPR006086 (Protein families, Protein domains, DNA ... O'Donovan A, Scherly D, Clarkson SG, Wood RD (1994). "Isolation of active recombinant XPG protein, a human DNA repair ...
2003). "Xeroderma pigmentosum group C protein possesses a high affinity binding site to human centrin 2 and calmodulin". J. ... 2001). "Centrosome protein centrin 2/caltractin 1 is part of the xeroderma pigmentosum group C complex that initiates global ... 2005). "Centrin 2 stimulates nucleotide excision repair by interacting with xeroderma pigmentosum group C protein". Mol. Cell. ... "Centrosome protein centrin 2/caltractin 1 is part of the xeroderma pigmentosum group C complex that initiates global genome ...
1994). "Correction of the DNA repair defect in xeroderma pigmentosum group E by injection of a DNA damage-binding protein" (PDF ... Chu G, Chang E (1988). "Xeroderma pigmentosum group E cells lack a nuclear factor that binds to damaged DNA". Science. 242 ( ... Nichols AF, Ong P, Linn S (1996). "Mutations specific to the xeroderma pigmentosum group E Ddb- phenotype". J. Biol. Chem. 271 ... Keeney S, Chang GJ, Linn S (1993). "Characterization of a human DNA damage binding protein implicated in xeroderma pigmentosum ...
Wittschieben BØ, Iwai S, Wood RD (December 2005). "DDB1-DDB2 (xeroderma pigmentosum group E) protein complex recognizes a ... of the xeroderma pigmentosum group E DNA repair defect to the chromatin and DNA binding proteins UV-DDB and replication protein ... Nichols AF, Ong P, Linn S (October 1996). "Mutations specific to the xeroderma pigmentosum group E Ddb- phenotype". The Journal ... this causes a mild form of the human disease xeroderma pigmentosum, called XPE. Patients in the XPE group have mild ...
"Complementation of DNA repair in xeroderma pigmentosum group A cell extracts by a protein with affinity for damaged DNA". EMBO ... who have a normal group A protein but a non-functional group C protein). Wood established his own group at ICRF and over the ... and children born with mutations in genes coding for NER proteins develop xeroderma pigmentosum or XP. XP patients cannot ... Wood, RD; Robins, P; Lindahl, T (1988). "Complementation of the xeroderma pigmentosum DNA repair defect in cell-free extracts ...
They bind specifically and directly to the xeroderma pigmentosum group C protein (XPC) to initiate nucleotide excision repair ( ... This article incorporates text from the public domain Pfam and InterPro: IPR015360 (Protein domains, Protein families). ... "Solution structure and backbone dynamics of the XPC-binding domain of the human DNA repair protein hHR23B". FEBS J. 272 (10): ...
This gene complements the ultraviolet sensitivity of xeroderma pigmentosum group C cells and encodes a protein with a C2 domain ... chain reaction of a cDNA whose product partially complements the ultraviolet sensitivity of xeroderma pigmentosum group C cells ... UV radiation resistance-associated gene protein is a protein that in humans is encoded by the UVRAG gene. ... The protein activates the Beclin1-PI(3)KC3 complex, promoting autophagy and suppressing the proliferation and tumorigenicity of ...
Yokoi M, Masutani C, Maekawa T, Sugasawa K, Ohkuma Y, Hanaoka F (March 2000). "The xeroderma pigmentosum group C protein ... "The BCR-ABL oncoprotein potentially interacts with the xeroderma pigmentosum group B protein". Proc. Natl. Acad. Sci. U.S.A. 96 ... GeneReviews/NIH/NCBI/UW entry on Xeroderma Pigmentosum XPBC-ERCC-3+protein at the U.S. National Library of Medicine Medical ... "Localization of the xeroderma pigmentosum group B-correcting gene ERCC3 to human chromosome 2q21". Genomics. 10 (4): 1035-1040 ...
O'Donovan A, Wood RD (May 1993). "Identical defects in DNA repair in xeroderma pigmentosum group G and rodent ERCC group 5". ... "Ultraviolet-induced movement of the human DNA repair protein, Xeroderma pigmentosum type G, in the nucleus". Proceedings of the ... Nouspikel T, Clarkson SG (June 1994). "Mutations that disable the DNA repair gene XPG in a xeroderma pigmentosum group G ... Habraken Y, Sung P, Prakash L, Prakash S (August 1994). "Human xeroderma pigmentosum group G gene encodes a DNA endonuclease". ...
... defect in a patient in xeroderma pigmentosum complementation group D who has the clinical features of xeroderma pigmentosum and ... GeneReviews/NIH/NCBI/UW entry on Xeroderma Pigmentosum ERCC2+Protein at the U.S. National Library of Medicine Medical Subject ... Lehmann AR (Jan 2001). "The xeroderma pigmentosum group D (XPD) gene: one gene, two functions, three diseases". Genes & ... The XPD protein is an indispensable part of the general transcription factor IIH (TFIIH) complex, which is a group of proteins ...
"Identification and characterization of xpac protein, the gene product of the human XPAC (xeroderma pigmentosum group A ... "Mutational analysis of the structure and function of the xeroderma pigmentosum group A complementing protein. Identification of ... "Entrez Gene: XPA xeroderma pigmentosum, complementation group A". Sugitani N, Sivley RM, Perry KE, Capra JA, Chazin WJ (2016 ... Molecular analysis of xeroderma pigmentosum group A gene". The Japanese Journal of Human Genetics. 38 (1): 1-14. doi:10.1007/ ...
... group B protein interact with a molecular complex containing the transcription factor IIH components xeroderma pigmentosum B ... DNA excision repair protein ERCC-6 (also CS-B protein) is a protein that in humans is encoded by the ERCC6 gene. The ERCC6 gene ... "The Cockayne syndrome group A gene encodes a WD repeat protein that interacts with CSB protein and a subunit of RNA polymerase ... Hence, confounding based on protein-protein, protein-substrate, and/or substrate-substrate interactions disallows conclusions ...
He set up research into genetic disorders, especially xeroderma pigmentosum (XP). For this research Bootsma used human cells, ... In 1984 his group was able to clone the repair gene ERCC1. When ERCC3 was also cloned this led to a solution for DNA repair in ... He focused on mechanisms that repaired DNA, especially in rare forms of skin cancer, and discovered several proteins in this ... Bootsma retired in October 2002, he was succeeded as group research leader by Jan Hoeijmakers. Bootsma died on 5 October 2020, ...
Multiple investigations suggests that the xeroderma pigmentosum group A (XPA) and replication protein A (RPA), which are NER ... RadA, a homologous protein to RecA, has been shown to have the same enzymatic activity in recombination as RecA. The protein ... CPPs are proteins that are able to carry "cargo" such as small proteins or molecules successfully into cells. The PGLAs are ... In peptide nucleic acid (PNA), the sugar-phosphate backbone of DNA is replaced with a protein-like backbone. PNAs form P-loops ...
"Xeroderma pigmentosum group E cells lack a nuclear factor that binds to damaged DNA" Science 242 (4878), 564-567 Times Cited: ... His other notable contributions include discovering and characterizing proteins involved in DNA repair and developing ... "Xeroderma pigmentosum p48 gene enhances global genomic repair and suppresses UV-induced mutagenesis" Molecular Cell 5 (4): 737- ... "Expression of the p48 xeroderma pigmentosum gene is p53-dependent and is involved in global genomic repair" Proc Natl Acad Sci ...
This gene encodes a member of the Rad2/xeroderma pigmentosum group G nuclease family, whose members are characterized by N- ... In addition, this protein has been found to localize to centrosomes where it has been implicated in regulation of centrosome ... terminal and internal xeroderma pigmentosum group G nuclease domains followed by helix-hairpin-helix domains and disordered C- ... The protein encoded by this gene is involved in resolution of Holliday junctions, which are intermediate four-way structures ...
... tacrolimus binding protein 1a MeSH D08.811.399.340.500 - xeroderma pigmentosum group d protein MeSH D08.811.399.403.483 - dna ... fanconi anemia complementation group l protein MeSH D08.811.464.938.750.374 - proto-oncogene proteins c-cbl MeSH D08.811. ... gtp-binding protein alpha subunits MeSH D08.811.277.040.330.300.200.100.100 - gtp-binding protein alpha subunits, g12-g13 MeSH ... gtp-binding protein alpha subunit, gi2 MeSH D08.811.277.040.330.300.200.100.300 - gtp-binding protein alpha subunits, gq-g11 ...
... xeroderma pigmentosum group d protein MeSH D12.776.930.930.937.249 - transcription factor tfiiia MeSH D12.776.930.930.937.500 ... smad1 protein MeSH D12.776.930.806.500.200 - smad2 protein MeSH D12.776.930.806.500.300 - smad3 protein MeSH D12.776.930.806. ... ets-domain protein elk-1 MeSH D12.776.930.635.600.300 - ets-domain protein elk-4 MeSH D12.776.930.675.500.500 - retinoid X ... oncogene protein v-maf MeSH D12.776.930.127.500.061.750 - proto-oncogene proteins c-maf MeSH D12.776.930.127.500.500 - maf ...
... promoter melting by the Xeroderma Pigmentosum complementation group B helicase of transcription factor IIH revealed by protein- ... is a Canadian scientist whose research focuses on the mechanisms by which regulated protein-protein, protein-DNA and protein- ... More recently, his laboratory has used protein affinity purification coupled with mass spectrometry to generate high-resolution ... The protein interaction network of the human transcription machinery reveals a role for the conserved GTPase RPAP4/GPN1 and ...
Xeroderma pigmentosum (XP) is a human autosomal recessive disease, characterised by a high incidence of sunlight-induced skin ... The XPG protein can be corrected by a 133 kDa nuclear protein, XPGC. XPGC is an acidic protein that confers normal ultraviolet ... There are a minimum of seven genetic complementation groups involved in this pathway: XP-A to XP-G. XP-G is one of the most ... Tanaka K, Wood RD (February 1994). "Xeroderma pigmentosum and nucleotide excision repair of DNA". Trends Biochem. Sci. 19 (2): ...
... xeroderma pigmentosum group d protein MeSH D12.776.260.775.937.249 - transcription factor tfiiia MeSH D12.776.260.775.937.500 ... ets-domain protein elk-1 MeSH D12.776.260.665.600.300 - ets-domain protein elk-4 MeSH D12.776.260.713.500.100 - smad1 protein ... oncogene protein v-maf MeSH D12.776.260.108.500.061.750 - proto-oncogene proteins c-maf MeSH D12.776.260.108.500.500 - maf ... ccaat-enhancer-binding protein-alpha MeSH D12.776.260.108.124.750 - ccaat-enhancer-binding protein-beta MeSH D12.776.260.108. ...
... trichothiodystrophy and xeroderma pigmentosum. Genes MCM8 and MCM9 encode proteins that form a complex. This complex functions ... Chromosome instability syndromes are a group of inherited conditions associated with chromosomal instability and breakage. They ... The germline MCM8-MCM9 protein complex is most likely required for the resolution of double-strand breaks that occur during ...
Liu, Y; Wang, Y; Rusinol, AE; Sinensky, MS; Liu, J; Shell, SM; Zou, Y (Feb 2008). "Involvement of xeroderma pigmentosum group A ... Protein synthesis and protein degradation decline with age in skeletal and heart muscle, as would be expected, since DNA damage ... Tian M, Jones DA, Smith M, Shinkura R, Alt FW (2004). "Deficiency in the nuclease activity of xeroderma pigmentosum G in mice ... These include ataxia-telangiectasia, Nijmegen breakage syndrome, some subgroups of xeroderma pigmentosum, trichothiodystrophy, ...
"Purification and cloning of a nucleotide excision repair complex involving the xeroderma pigmentosum group C protein and a ... UV excision repair protein RAD23 homolog A is a protein that in humans is encoded by the RAD23A gene. The protein encoded by ... the xeroderma pigmentosum group C gene and two human homologs of yeast RAD23". Genomics. 23 (3): 651-658. doi:10.1006/geno. ... MPG protein) interacts with human RAD23 proteins". J. Biol. Chem. 275 (37): 28433-28438. doi:10.1074/jbc.M001064200. PMID ...
"Xeroderma pigmentosum group F caused by a defect in a structure-specific DNA repair endonuclease". Cell. 86 (5): 811-22. doi: ... During NER, the ERCC1 protein interacts with the XPA protein to coordinate DNA and protein binding. Mammalian cells with mutant ... When the normal genes are absent, these mutations can lead to human syndromes, including xeroderma pigmentosum, Cockayne ... Some individuals with the rare inherited syndrome xeroderma pigmentosum have mutations in ERCC4. These patients are classified ...
Learn about Xeroderma Pigmentosum Group D Protein at online-medical-dictionary.org ... Group 2 Protein. Excision Repair Cross-Complementing Rodent Repair Deficiency, Group 2 Protein. Xeroderma Pigmentosum ... Xeroderma Pigmentosum Group D Protein. Synonyms. ERCC2 Protein. Excision Repair Cross Complementing Rodent Repair Deficiency, ... and mutations in this protein are associated with XERODERMA PIGMENTOSUM. ...
... a homolog of the human xeroderma pigmentosum (XP) group E gene which encodes a UV-damaged DNA binding protein. The repE gene ... a homolog of the human xeroderma pigmentosum (XP) group E gene which encodes a UV-damaged DNA binding protein. The repE gene ... repE--the Dictyostelium homolog of the human xeroderma pigmentosum group E gene is developmentally regulated and contains a ... The predicted protein encodes a leucine zipper motif. The repE gene is not expressed by mitotically dividing cells, and repE ...
"Xeroderma pigmentosum group C protein complex is the initiator of global genome nucleotide excision repair". Molecular Cell. 2 ... Xeroderma pigmentosum was first described in the 1870s by Moritz Kaposi. In 1882, Kaposi coined the term xeroderma pigmentosum ... "Xeroderma Pigmentosum". NORD (National Organization for Rare Disorders). 2017. Retrieved 28 June 2018. "Xeroderma pigmentosum ... Xeroderma pigmentosum was first described in 1874 by Hebra and Moritz Kaposi. In 1882, Kaposi coined the term xeroderma ...
The ERCC3 gene provides instructions for making a protein called XPB. Learn about this gene and related health conditions. ... xeroderma pigmentosum group B-complementing protein. *xeroderma pigmentosum, complementation group B. Additional Information & ... Xeroderma pigmentosum. At least one variant in the ERCC3 gene also appears to be a rare cause of xeroderma pigmentosum. This ... excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B ...
Xeroderma pigmentosum group F-complementing protein; xeroderma pigmentosum, complementation group F ... protein binding protein C-terminus binding structure-specific DNA binding protein N-terminus binding nucleic acid binding DNA ... DNA repair protein complementing XP-F cells; Ercc4 protein-like; excision repair cross-complementation group 4; excision repair ... Protein Aliases: DNA excision repair protein ERCC-4; DNA repair endonuclease subunit; DNA repair endonuclease XPF; ...
Xeroderma pigmentosum group C protein complex is the initiator of global genome nucleotide excision repair. Mol. Cell. 2:223- ... Mutations specific to the xeroderma pigmentosum group E Ddb-phenotype. J. Biol. Chem. 271:24317-24320.. Nordberg, J., Arner, E. ... High mobility group proteins 1 and 2 recognize chromium-damaged DNA. Carcinogenesis. 18:371-375.. Wood, R.D. 1996. DNA repair ... High-mobility group 1 protein inhibits helicase catalyzed displacement of cisplatin-damaged DNA. Biochimica et Biophysica Acta ...
DNA damage-binding protein 2 (Q92466) (SMART). OMIM:600811: Xeroderma pigmentosum, group E, DDB-negative subtype. OMIM:278740: ... Repeated WD40 motifs act as a site for protein-protein or protein-DNA interaction, and proteins containing WD40 repeats are ... several proteins with WD-repeats are able to fold into globular proteins in a rabbit reticulocyte lysate. One protein, beta ... Maltose Binding Protein fusion with RACK1 from A. thaliana. 3dw8. Structure of a Protein Phosphatase 2A Holoenzyme with B55 ...
DNA damage-binding protein 2 (Q92466) (SMART). OMIM:600811: Xeroderma pigmentosum, group E, DDB-negative subtype. OMIM:278740: ... Repeated WD40 motifs act as a site for protein-protein or protein-DNA interaction, and proteins containing WD40 repeats are ... several proteins with WD-repeats are able to fold into globular proteins in a rabbit reticulocyte lysate. One protein, beta ... Maltose Binding Protein fusion with RACK1 from A. thaliana. 3dw8. Structure of a Protein Phosphatase 2A Holoenzyme with B55 ...
In 1882, Kaposi coined the term xeroderma pigmentosum for the condition, referring to its characteristic dry, pigmented skin. ... Xeroderma pigmentosum (XP) was first described in 1874 by Hebra and Kaposi. ... Patients with xeroderma pigmentosum complementation groups C, E and V do not have abnormal sunburn reactions. Br J Dermatol. ... In addition to their role in DNA repair, xeroderma pigmentosum proteins also have additional functions. For example, Fréchet et ...
In this work, we have investigated whether DDB2 protein may influence the repair of a UV-damaged DNA plasmid into the cellular ... Moreover, the co-localization between DDB2 proteins and different NER factors recruited at DNA damaged sites was analysed by ... as also confirmed by the different extent of co-localization of DDB2Wt and some NER proteins (such as XPG), vs the DDB2 mutant ... confirms itself as a very helpful approach to assess in the cellular context the effect of expressing mutant vs Wt NER proteins ...
The xeroderma pigmentosum (XP) group D protein is involved in nucleotide excision repair (NER) as well as in basal ... Seven xeroderma pigmentosum (XP) complementation groups (XP-A to XP-G) according to the respective mutated genes (XPA-XPG) and ... Patients belonging to xeroderma pigmentosum (XP) complementation group C comprise one-third of all XP patients. Only four major ... Defects in these two proteins result in severe diseases like xeroderma pigmentosum (XP). We applied our newly CRISPR/Cas9 ...
... xeroderma pigmentosum group B complementing, XPB. *Previous symbols and names : excision repair cross-complementation group 3, ... excision repair cross-complementing rodent repair deficiency, complementation group 3. *Type : gene with protein product ... in Xeroderma pigmentosum ORPHA:910. *Disease-causing germline mutation(s) in Xeroderma pigmentosum-Cockayne syndrome complex ...
Xeroderma pigmentosum group G-complementing protein. *excision repair cross-complementing rodent repair deficiency, ... Mutations in this gene cause xeroderma pigmentosum complementation group G (XP-G), which is also referred to as xeroderma ... xeroderma pigmentosum, complementation group G. Description. The ERCC5 gene encodes a single-stranded structure-specific DNA ... The ERCC5 protein may also function in other cellular processes, including RNA polymerase II transcription, and transcription- ...
Sugasawa K. The xeroderma pigmentosum group C protein complex and ultraviolet-damaged DNA-binding protein: functional assays ... the Xeroderma pigmentosum group C (XPC) and group A (XPA) proteins are involved. To elucidate differences in the functions of ... Mouse Models for Xeroderma Pigmentosum Group A and Group C Show Divergent Cancer Phenotypes Joost P.M. Melis; Joost P.M. Melis ... Yokoi M, Masutani C, Maekawa T, Sugasawa K, Ohkuma Y, Hanaoka F. The xeroderma pigmentosum group C protein complex XPC-HR23B ...
... xeroderma pigmentosum complementation group C (XPC), and KU80 proteins. Also, Hatano et al. revealed that miRNA-744-3p can ... This miRNA is related with prostate transmembrane protein, androgen-induced l(PMEPA1), and tumor protein p53 inducible nuclear ... described that miRNA-145 mimics can silence and deregulate the Speckle-type pox virus and zinc finger protein (POZ) protein ( ... protein kinase C epsilon (PKCϵ) and ZEB1 expression, proteins involved in EMT (40). In the same context, miRNA-30a has been ...
xeroderma pigmentosum, complementation group C. Molecular. skeletal muscle. Human. XPC. 7.0% Increase Gene Expression Level. ... xeroderma pigmentosum, complementation group C. Molecular. skeletal muscle. Human. XPC. 6.0% Increase Gene Expression Level. ...
Xeroderma pigmentosum group C protein complex is the initiator of global genome nucleotide excision repair. Mol Cell 1998; 2(2 ... Liu X, Sun K, Wang H, Dai Y. Knockdown of retinoblastoma protein may sensitize glioma cells to cisplatin through inhibition of ... Overexpression of long non-coding RNA differentiation antagonizing non-protein coding RNA inhibits the proliferation, migration ... complexes incorporating straight-chain aliphatic diamine linker groups. J Med Chem 1992; 35(24): 4526-32.. [http://dx.doi.org/ ...
... the XPC protein, must bind to the damaged DNA site. The UV-damaged DNA-binding protein (UV-DDB), which is impaired in XP group ... Defects in NER are associated with several human genetic disorders including xeroderma pigmentosum (XP), which is characterized ...
... xeroderma pigmentosum group E binding factor). Levels of XPE-BF were found to increase early in the development of cisplatin ... Such an ability might result from the presence of certain DNA repair proteins. One example of a DNA repair protein that has ... Another example of a DNA repair protein that may be involved in the recognition of cisplatin damage is ERCC1, most likely a DNA ... Studies showing an increase in levels of DNA repair proteins as tumor cells become less sensitive-and therefore more resistant- ...
Xeroderma Pigmentosum Group D Protein [D08.811.277.040.025.159.500] Xeroderma Pigmentosum Group D Protein ... Minichromosome Maintenance Proteins - Preferred Concept UI. M0579688. Scope note. A family of proteins that were originally ... MCM Protein Complex - Narrower Concept UI. M0579691. Scope note. A hexameric protein complex of minichromosome maintenance ... Xeroderma Pigmentosum Group D Protein [D08.811.399.340.500] Xeroderma Pigmentosum Group D Protein ...
Design and Structure-Guided Development of Novel Inhibitors of the Xeroderma Pigmentosum Group A (XPA) Protein-DNA Interaction ... Abstract C58: Small molecule inhibitors targeting the interaction of xeroderma pigmentosum group A protein with cisplatin- ... Multiple protein-protein interactions within the DNA-PK complex are mediated by the C-terminus of Ku 80.. Bennett, Sara M⋅Woods ... Exploring a structural protein-drug interactome for new therapeutics in lung cancer.. Peng, Xiaodong⋅Peng, Xiaodong⋅Peng, ...
Xeroderma pigmentosum, for example, stems from a specific DNA repair deficiency. The predominant form of this condition is ... Yet another group of genes associated with cancer formation regulates programmed cell death, or apoptosis. The normal function ... Adherens junctions, protein complexes that occur at cell-cell points of contact in epithelial and endothelial tissues, appear ... Patients with xeroderma pigmentosum must protect themselves from sunlight all their lives, but they nevertheless develop ...
Xeroderma Pigmentosum, Complementation Group G. Microphthalmia. OMIM:278780. Congenital Primary Aphakia. Microphthalmia, ... increased circulating total protein level Cep135em1(IMPC)J HET Late adult 9.67×10-05 ... Abnormal circulating protein concentration, Abnormal circulating albumin concentration. ORPHA:86839. Intellectual Disability- ... Abnormal circulating protein concentration, Abnormal circulating polysaccharide concentration, Hy.... ORPHA:103910. ...
Xeroderma pigmentosum group B-complementing protein). 3.6.4.12 Homo sapiens Cerebro-Oculo-Facio-Skeletal Syndrome,Ichthyosis, ... Xeroderma Pigmentosum, Complementation Group C,Xeroderma Pigmentosum, Complementation Group D,Xeroderma Pigmentosum, Variant ... Xeroderma Pigmentosum, Complementation Group F,Xeroderma Pigmentosum, Complementation Group G,Skin Carcinoma,Xeroderma ... Xeroderma Pigmentosum, Complementation Group C,Xeroderma Pigmentosum, Variant Type,Fanconi Anemia, Complementation Group A, ...
... xeroderma pigmentosum group D (XPD, also known as ERCC2) and X-ray repair cross-complementing group (XRCC), have important ... TS protein expressions were determined by Western immunoblotting, as previously described [36]. Equivalent amounts of protein ... Park DJ, Stoehlmacher J, Zhang W, Tsao-Wei DD, Groshen S, Lenz HJ: A Xeroderma pigmentosum group D gene polymorphism predicts ... Six bp deletion homozygotes tended to show lower TS protein expression (TS/tubulin expression ratio 0.88 in -6 bp/-6 bp vs. ...
Xeroderma Pigmentosum Group A Protein / biosynthesis; Xeroderma Pigmentosum Group A Protein / genetics ... Antimicrobial Use Guidelines for Treatment of Urinary Tract Disease in Dogs and Cats: Antimicrobial Guidelines Working Group of ... MeSH headings : Adolescent; Animals; Bacterial Outer Membrane Proteins / genetics; Doxycycline / therapeutic use; Humans; Male ... author keywords: Mite; Acari; Phytoseiidae; Transcriptome; 454; Vitellogenin; Vitellin; Yolk protein; Vitellogenin receptor; ...
Xeroderma Pigmentosum Complementation Group C.. Acknowledgments The authors express their gratitude to the staff and students ... such as tight junction protein ZO-1 and cellular adhesion protein E-cadherin45, 46. These proteins play significant roles in ... Forkhead box protein A1, GAPDH: Glyceraldehyde 3-Phosphate Dehydrogenase, GATA3: GATA Binding Protein 3, GC: Gemcitabine and ... Lee Y.C., Tsai K.W., Liao J.B., Kuo W.T., Chang Y.C., Yang Y.F., High expression of tight junction protein 1 as a predictive ...
Biochemical and structural domain analysis of xeroderma pigmentosum complementation group C protein. Biochemistry 2006, 45: ... Biochemical and structural domain analysis of xeroderma pigmentosum complementation group C protein. Biochemistry 2006, 45: ... Biochemical and structural domain analysis of xeroderma pigmentosum complementation group C protein. ... Biochemical and structural domain analysis of xeroderma pigmentosum complementation group C protein. ...
Previous post The xeroderma pigmentosum group E gene product DDB2 a protein involved ... associated proteins kinase (ZAP70) and activation from the downstream kinase calcium/calmodulin-dependent proteins kinase type ... offers since been defined as encoding a proteins that acts mainly because a poor regulator of meiosis by phosphorylating and ... 23 31 32 Therefore both of these genes encode the protein central for the initiation and modulation of meiosis in was ...
Xeroderma Pigmentosum Complementation Group E Protein (Xpe/Ddb2): Purification Of Various Complexes Of Xpe And Analyses Of ... Xeroderma pigmentosum is characterized by increased sensitivity of the affected individuals to sunlight and light-induced skin ... Misincorporation Of Free M-Tyrosine Cytotoxic Mechanism For Oxidized A Into Cellular Proteins: A Potential Amino Acids  Gurer- ... Dejgaard, S; Ortapamuk, O; Ozer, I (Harwood Acad Publ Gmbh, Taylor & Francis Group, 1999) ...
  • In people with xeroderma pigmentosum, this damage is not repaired. (wikipedia.org)
  • Problems with DNA repair cause people with xeroderma pigmentosum to be extremely sensitive to UV rays. (medlineplus.gov)
  • As a result, people with xeroderma pigmentosum have a greatly increased risk of developing cancer. (medlineplus.gov)
  • Seven xeroderma pigmentosum repair genes, XPA through XPG, have been identified. (medscape.com)
  • Seven complementation groups, XPA through XPG, corresponding to defects in the corresponding gene products of XPA through XPG genes, have been described. (medscape.com)
  • In addition to the defects in the repair genes, UV-B radiation also has immunosuppressive effects that may be involved in the pathogenesis of xeroderma pigmentosum. (medscape.com)
  • Briefly, miRNAs are expected to account for 1-5% of the human genome and to interfere with at least 30% of the protein-coding genes ( 4 , 5 ). (frontiersin.org)
  • Yet another group of genes associated with cancer formation regulates programmed cell death, or apoptosis. (the-scientist.com)
  • The normal function of the proteins expressed by these genes is to recognize superfluous, damaged, aged, or aberrant cells that must be eliminated. (the-scientist.com)
  • This domain occurred 2 times on human genes ( 5 proteins). (umbc.edu)
  • Many of the xeroderma pigmentosum genes are involved in a DNA-repair mechanism called nucleotide excision repair (NER). (news-medical.net)
  • In this process, the proteins produced by these genes have a variety of activities. (news-medical.net)
  • It plays an essential role in NUCLEOTIDE EXCISION REPAIR , and mutations in this protein are associated with XERODERMA PIGMENTOSUM . (online-medical-dictionary.org)
  • The basic defect in xeroderma pigmentosum is in nucleotide excision repair (NER), leading to deficient repair of DNA damaged by UV radiation. (medscape.com)
  • This protein is known to act as an important sensor in the Global Genome Nucleotide Excision Repair (GG-NER) by recognizing sites of UV-induced DNA lesions [ 2 ]. (biomedcentral.com)
  • One of the most versatile defense mechanisms against the accumulation of DNA damage is nucleotide excision repair, in which, among others, the Xeroderma pigmentosum group C (XPC) and group A (XPA) proteins are involved. (aacrjournals.org)
  • Centrin2 binds to xeroderma pigmentosum group C protein (XPC), stabilising it, and its presence slightly increases nucleotide excision repair (NER) activity in vitro. (nuigalway.ie)
  • This protein complex functions in nucleotide-excision repair and binds to DNA following UV damage. (sitoolsbiotech.com)
  • Versatile DNA damage detection by the global genome nucleotide excision repair protein XPC. (childrensmercy.org)
  • This protein is the smaller subunit of a heterodimeric protein complex that participates in nucleotide excision repair, and this complex mediates the ubiquitylation of histones H3 and H4, which facilitates the cellular response to DNA damage. (neobioscience.com)
  • Xeroderma pigmentosum is a rare disorder transmitted in an autosomal recessive manner. (medscape.com)
  • Defective activity of this complex causes the repair defect in patients with xeroderma pigmentosum complementation group E (XPE) - an autosomal recessive disorder characterized by photosensitivity and early onset of carcinomas. (sitoolsbiotech.com)
  • Xeroderma pigmentosum is an autosomal recessive pigmentary skin disorder characterized by solar hypersensitivity of the skin, high predisposition for developing cancers on areas exposed to sunlight and, in some cases, neurological abnormalities. (abcam.cn)
  • Two complementation groups have been identified in CS and seven in XP. (arizona.edu)
  • This protein is an essential part (subunit) of a group of proteins known as the general transcription factor 2 H (TFIIH) complex. (medlineplus.gov)
  • Folding of proteins with WD-repeats: comparison of six members of the WD-repeat superfamily to the G protein beta subunit. (embl.de)
  • Members of this family include the signal-transducing G protein beta subunit, as well as other proteins that regulate signal transduction, transcription, pre-mRNA splicing, cytoskeletal organization, and vesicular fusion. (embl.de)
  • The XPB and XPD gene products are part of a 9-subunit protein complex (TFIIH) that is also needed for the open complex formation. (medscape.com)
  • Recognition of DNA Termini by the C-Terminal Region of the Ku80 and the DNA-Dependent Protein Kinase Catalytic Subunit. (proquest.com)
  • The protein encoded by this gene is the large subunit (p127) of the heterodimeric DNA damage-binding (DDB) complex while another protein (p48) forms the small subunit. (sitoolsbiotech.com)
  • Studies suggest that the XPB protein works together with XPD, another protein in the TFIIH complex that is produced from the ERCC2 gene, to start (initiate) gene transcription. (medlineplus.gov)
  • However, the only studied example of a WD-repeat protein, G beta, synthesized in vitro in a rabbit reticulocyte lysate, is unable to fold into a native structure without its partner protein G gamma. (embl.de)
  • They form into a protein complex that has helicase activity and is involved in a variety of DNA-related functions including replication elongation, RNA transcription, chromatin remodeling, and genome stability. (bvsalud.org)
  • Researchers at The Scripps Research Institute and Berkeley Lab including life scientists Priscilla Cooper , John Tainer (guest) and Li Fan (formerly with the Lab, now at Scripps) have determined the crystal structure of an enzyme called xeroderma pigmentosum group B (XPB) helicase. (lbl.gov)
  • Mutations in this gene cause xeroderma pigmentosum complementation group G (XP-G), which is also referred to as xeroderma pigmentosum VII (XP7), a skin disorder characterized by hypersensitivity to UV light and increased susceptibility for skin cancer development following UV exposure. (nih.gov)
  • Mutations in this gene cause xeroderma pigmentosum complementation group E, a recessive disease that is characterized by an increased sensitivity to UV light and a high predisposition for skin cancer development, in some cases accompanied by neurological abnormalities. (neobioscience.com)
  • Both mutations impact excision-repair cross-complementing proteins important for DNA repair during replication. (arizona.edu)
  • In addition to sun sensitivity, xeroderma pigmentosum is sometimes associated with progressive neurological abnormalities. (medlineplus.gov)
  • [ 10 ] Although typical symptoms of immune deficiency, such as multiple infections, are not usually observed in patients with xeroderma pigmentosum, several immunologic abnormalities have been described in the skin of patients with xeroderma pigmentosum. (medscape.com)
  • Patients with xeroderma pigmentosum must protect themselves from sunlight all their lives, but they nevertheless develop multiple skin carcinomas, and in about one-third of cases, also progressive neurological abnormalities. (the-scientist.com)
  • Mini-F protein that binds to a unique region for partition of mini-F plasmid DNA. (fred.net)
  • This gene encodes a protein that is necessary for the repair of ultraviolet light-damaged DNA. (neobioscience.com)
  • T Mutation Causing Neurological Impairment in a Case of Xeroderma Pigmentosum Complementation Group A. Frontiers in genetics 2021 9 12 717361. (cdc.gov)
  • We have cloned and characterized the Dictyostelium discoideum repE gene, a homolog of the human xeroderma pigmentosum (XP) group E gene which encodes a UV-damaged DNA binding protein. (nih.gov)
  • The predicted protein encodes a leucine zipper motif. (nih.gov)
  • Clinical studies of the skin of patients with xeroderma pigmentosum indicate prominent depletion of Langerhans cells induced by UV radiation. (medscape.com)
  • The UV-damaged DNA-binding protein (UV-DDB), which is impaired in XP group E patients, has also been implicated in damage recognition in global genomic NER, but its precise functions and its relationship to the XPC complex have not been elucidated. (embl-heidelberg.de)
  • When he's not caring for his patients, Dr. Bunick, who is an assistant professor of dermatology for Yale School of Medicine, conducts research on the three-dimensional protein structures that form the skin's barrier. (yalemedicine.org)
  • These patients were then divided into three groups for analysis: patients without BM (No-BM), patients with PM and patients with LM. (bvsalud.org)
  • Some patients have combined phenotypical features of Cockayne syndrome (CS) and xeroderma pigmentosum (XP) known as the XP-CS complex ( 216400 ). (arizona.edu)
  • XP patients with CS features fall into only three (B, D, G) of the XP groups. (arizona.edu)
  • Comprehensive germline mutation analysis and clinical profile in a large cohort of Brazilian xeroderma pigmentosum patients. (cdc.gov)
  • Thyroid nodules in xeroderma pigmentosum patients: a feature of premature aging. (cdc.gov)
  • Molecular analysis directs the prognosis, management and treatment of patients with xeroderma pigmentosum. (cdc.gov)
  • Previously we have shown that DDB2, a protein involved in the Global Genome Repair, interacts directly with PCNA and, in human cells, the loss of this interaction affects DNA repair machinery. (biomedcentral.com)
  • In this work, we have investigated whether DDB2 protein may influence the repair of a UV-damaged DNA plasmid into the cellular environment by applying the HCR method. (biomedcentral.com)
  • Moreover, the co-localization between DDB2 proteins and different NER factors recruited at DNA damaged sites was analysed by immunofluorescence and confocal microscopy. (biomedcentral.com)
  • The results have shown that DDB2 Wt recognize and repair the UV-induced lesions in plasmidic DNA transfected in the cells, whereas a delay in these processes were observed in the presence of DDB2 PCNA- , as also confirmed by the different extent of co-localization of DDB2 Wt and some NER proteins (such as XPG), vs the DDB2 mutant form. (biomedcentral.com)
  • To clarify this issue, we decided to apply a transfection-based assay, named Host Cell Reactivation (HCR), to investigate DNA lesions removal efficacy in the presence of DDB2 Wt protein or DDB2 mutated one. (biomedcentral.com)
  • WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. (embl.de)
  • Centrosomes, the principal microtubule-organising centres in animal cells, contain centrins, small, conserved calcium-binding proteins unique to eukaryotes. (nuigalway.ie)
  • Various other defects in cell-mediated immunity have been reported in xeroderma pigmentosum. (medscape.com)
  • Defects in NER are associated with several human genetic disorders including xeroderma pigmentosum (XP), which is characterized by a marked predisposition to skin cancer. (embl-heidelberg.de)
  • Signs and symptoms of xeroderma pigmentosum may include:[citation needed] Severe sunburn when exposed to only small amounts of sunlight. (wikipedia.org)
  • The main symptoms of xeroderma pigmentosum are caused by an accumulation of unrepaired DNA damage. (news-medical.net)
  • Unlike xeroderma pigmentosum (described below), trichothiodystrophy is not associated with an increased risk of skin cancer. (medlineplus.gov)
  • Identification and isolation of damage-recognition protein complexes from zebrafish(Danio rerio) early embryos. (ncl.edu.tw)
  • The mission of the Pittsburgh Center for HIV Protein Interactions (PCHPI) is to understand HIV maturation and the early cellular events of HIV infection by characterizing HIV-host cell protein interactions/complexes at a high-resolution, molecular level. (pitt.edu)
  • These complexes function in DNA repair pathways, primarily DNA MISMATCH REPAIR , where MutL/MLH1 and the MUTS DNA MISMATCH-BINDING PROTEIN are targeted to damaged DNA . (nih.gov)
  • While GG-NER employs UV-DDB heterodimer and XPC complex to initiate the DNA repair process, TC-NER utilizes elongating RNA polymerase II (Pol II) and Cockayne syndrome B (CSB) proteins as damage sensors [ 8 ]. (biomedcentral.com)
  • Natale V. A comprehensive description of the severity groups in Cockayne syndrome . (arizona.edu)
  • Xeroderma pigmentosum (XP) is a genetic disorder in which there is a decreased ability to repair DNA damage such as that caused by ultraviolet (UV) light. (wikipedia.org)
  • A rare inherited disorder, Xeroderma Pigmentosum (XP) is a photosensitive condition characterized by high susceptibility to skin cancers. (news-medical.net)
  • Unraveling the complexities of DNA-dependent protein kinase autophosphorylation. (proquest.com)
  • The SAD1/RAD53 protein kinase controls multiple checkpoints and DNA damage-induced transcription in yeast. (academicinfluence.com)
  • For initiation of the repair reaction at the genome-wide level, a complex containing one of the gene products involved in XP, the XPC protein, must bind to the damaged DNA site. (embl-heidelberg.de)
  • Following the m 6 A modification, methylated binding proteins precisely identify and bind to the modified RNA. (biomedcentral.com)
  • High information conservation implies that at least three proteins bind independently to F plasmid incD repeats. (fred.net)
  • A family of inhibitory proteins which bind to the REL PROTO-ONCOGENE PROTEINS and modulate their activity. (bvsalud.org)
  • In the CYTOPLASM, I-kappa B proteins bind to the transcription factor NF-KAPPA B. Cell stimulation causes its dissociation and translocation of active NF-kappa B to the nucleus. (bvsalud.org)
  • Several polymorphisms in TS may influence TS mRNA transcription, stability, or protein expression. (biomedcentral.com)
  • Contribution of xeroderma pigmentosum complementation group D gene polymorphisms in breast and ovarian cancer susceptibility: A protocol for systematic review and meta analysis. (cdc.gov)
  • In the xeroderma pigmentosum variant, a mutation occurs in DNA polymerase η. (medscape.com)
  • The ERCC5 protein may also function in other cellular processes, including RNA polymerase II transcription, and transcription-coupled DNA repair. (nih.gov)
  • RNA polymerase-associated protein RapA (EC 3.6.4. (weizmann.ac.il)
  • The XPB (ERCC3) protein is employed in unwinding the DNA double helix after DNA damage is initially recognized. (wikipedia.org)
  • The ERCC3 gene provides instructions for making a protein called XPB. (medlineplus.gov)
  • At least one variant in the ERCC3 gene also appears to be a rare cause of xeroderma pigmentosum. (medlineplus.gov)
  • The ERCC3 gene variant that causes xeroderma pigmentosum changes one amino acid in the XPB protein. (medlineplus.gov)
  • Interestingly, we found that overexpression of the centrin interactor POC5 leads to the assembly of linear, centrin-dependent structures that recruit other centrosomal proteins such as PCM-1 and NEDD1. (nuigalway.ie)
  • Full length human recombinant protein of human XPF produced in HEK293 cell. (thermofisher.com)
  • The binding of 12-hr-old and 84-hr-old extracts to CPD- and 6-4PPs under various concentration of NaCl supported the possibility that different damage-recognition protein were expressed in zebrafish according to their developmental condition. (ncl.edu.tw)
  • several WD40-containing proteins act as key regulators of plant-specific developmental events. (embl.de)
  • The continued presence of repair proteins at sites of DNA damage may also contribute to the pathogenesis of cutaneous cancer, as has been shown in XPD. (medscape.com)
  • The distortion of the double helix caused by the CPDs is smaller than that of 6-4PPs, and their recognition is performed by the synchronized work of UV-DDB complex and XPC protein [ 3 ]. (biomedcentral.com)
  • A hexameric protein complex of minichromosome maintenance proteins. (bvsalud.org)
  • The protein encoded by this gene also functions as an adaptor molecule for the cullin 4 (CUL4) ubiquitin E3 ligase complex by facilitating the binding of substrates to this complex and the ubiquitination of proteins. (sitoolsbiotech.com)
  • Current projects are focused on CA and capsid interactions, proteins involved in trafficking and nuclear import, retroviral intasome structure, and analyses of the HIV-1 pre-integration complex. (pitt.edu)
  • Okuda Y, Nishi R, Ng JM, Vermeulen W, van der Horst GT, Mori T, Hoeijmakers JH, Hanaoka F, Sugasawa K. Relative levels of the two mammalian Rad23 homologs determine composition and stability of the xeroderma pigmentosum group C protein complex. (childrensmercy.org)
  • Xeroderma pigmentosum, for example, stems from a specific DNA repair deficiency. (the-scientist.com)
  • specifically, it replaces the amino acid threonine with the amino acid proline at protein position 119 (written as Thr119Pro or T119P). (medlineplus.gov)
  • Specifically, the variant replaces the amino acid phenylalanine with the amino acid serine at protein position 99 (written as Phe99Ser or F99S). (medlineplus.gov)
  • We chose proteins that include amino and carboxyl extensions as well as proteins that are made up entirely of WD-repeats. (embl.de)
  • Quinolines substituted in any position by one or more amino groups. (lookformedical.com)
  • We show that unlike G beta, several proteins with WD-repeats are able to fold into globular proteins in a rabbit reticulocyte lysate. (embl.de)
  • A xeroderma pigmentosum variant has also been described. (medscape.com)
  • however, the XPF gene product functions as an endonuclease when complexed to another protein. (medscape.com)
  • Chemical inhibitor targeting the replication protein A-DNA interaction increases the efficacy of Pt-based chemotherapy in lung and ovarian cancer. (proquest.com)
  • The binding activity expressed in embryos was apparently unrelated to human DNA repair damage-recognition proteins XPA、RPA-70 and RPA-32, since those polypeptides recognized by an anti-human XPA、RPA-70 and RPA-32 antibody were detected only in 84-h-old zebrafish extracts. (ncl.edu.tw)
  • The DNA damage-recognition problem in human and other eukaryotic cell: the XPA damage binding protein. (ncl.edu.tw)
  • Characterization of DNA recognition by the human UV-damaged DNA-binding protein. (ncl.edu.tw)
  • DNA repair proteins that include the bacterial MutL protein and its eukaryotic homologs. (nih.gov)
  • WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. (embl.de)
  • The specificity of the proteins is determined by the sequences outside the repeats themselves. (embl.de)
  • Studies suggest that the XPB protein may act as a wedge, holding open the two strands of DNA so other proteins can snip out (excise) the abnormal section and replace the damaged area with the correct DNA. (medlineplus.gov)
  • If WD proteins form structures similar to G beta, their hydrodynamic properties should be those of compact, globular proteins, and they should be resistant to cleavage by trypsin. (embl.de)
  • Our working definition of folding was that the proteins from globular, trypsin-resistant structures because, except for G beta gamma, their functions are not known or cannot be assayed in reticulocyte lysates. (embl.de)
  • XPC as breast cancer susceptibility gene: evidence from genetic profiling, statistical inferences and protein structural analysis. (cdc.gov)
  • Exploring a structural protein-drug interactome for new therapeutics in lung cancer. (proquest.com)
  • Cancer stem cells (CSCs) represent a distinct group of cells within cancerous tissue that possess the ability to initiate tumorigenesis and exhibit potency, self-renewal, and drug resistance. (bmrat.org)
  • Effects of Xeroderma pigmentosum group C polymorphism on the likelihood of prostate cancer. (cdc.gov)
  • In 1882, Kaposi coined the term xeroderma pigmentosum for the condition, referring to its characteristic dry, pigmented skin. (wikipedia.org)
  • Immune surveillance plays a major role in the defense against virus-associated tumors, where the virally encoded transforming proteins provide readily recognizable foreign targets. (the-scientist.com)
  • Sequence walkers: a graphical method to display how binding proteins interact with DNA or RNA sequences. (fred.net)