A field of biological research combining engineering in the formulation, design, and building (synthesis) of novel biological structures, functions, and systems.
The application of engineering principles and methods to living organisms or biological systems.
Directed modification of the gene complement of a living organism by such techniques as altering the DNA, substituting genetic material by means of a virus, transplanting whole nuclei, transplanting cell hybrids, etc.
Chemically synthesized structures which functionally resemble natural cells.
Body of knowledge related to the use of organisms, cells or cell-derived constituents for the purpose of developing products which are technically, scientifically and clinically useful. Alteration of biologic function at the molecular level (i.e., GENETIC ENGINEERING) is a central focus; laboratory methods used include TRANSFECTION and CLONING technologies, sequence and structure analysis algorithms, computer databases, and gene and protein structure function analysis and prediction.
Comprehensive, methodical analysis of complex biological systems by monitoring responses to perturbations of biological processes. Large scale, computerized collection and analysis of the data are used to develop and test models of biological systems.
Biologically functional sequences of DNA chemically synthesized in vitro.
One of the BIOLOGICAL SCIENCE DISCIPLINES concerned with the origin, structure, development, growth, function, genetics, and reproduction of animals, plants, and microorganisms.
Cellular functions, mechanisms, and activities.
Hydrocarbon-rich byproducts from the non-fossilized BIOMASS that are combusted to generate energy as opposed to fossilized hydrocarbon deposits (FOSSIL FUELS).
Procedures by which protein structure and function are changed or created in vitro by altering existing or synthesizing new structural genes that direct the synthesis of proteins with sought-after properties. Such procedures may include the design of MOLECULAR MODELS of proteins using COMPUTER GRAPHICS or other molecular modeling techniques; site-specific mutagenesis (MUTAGENESIS, SITE-SPECIFIC) of existing genes; and DIRECTED MOLECULAR EVOLUTION techniques to create new genes.
Methods used for the chemical synthesis of compounds. Included under this heading are laboratory methods used to synthesize a variety of chemicals and drugs.
The use of genetic methodologies to improve functional capacities of an organism rather than to treat disease.
Living organisms or their toxic products that are used to cause disease or death of humans during WARFARE.
Interacting DNA-encoded regulatory subsystems in the GENOME that coordinate input from activator and repressor TRANSCRIPTION FACTORS during development, cell differentiation, or in response to environmental cues. The networks function to ultimately specify expression of particular sets of GENES for specific conditions, times, or locations.
Methods and techniques used to genetically modify cells' biosynthetic product output and develop conditions for growing the cells as BIOREACTORS.
Materials or phenomena which can provide energy directly or via conversion.
A field of biology concerned with the development of techniques for the collection and manipulation of biological data, and the use of such data to make biological discoveries or predictions. This field encompasses all computational methods and theories for solving biological problems including manipulation of models and datasets.
Complex sets of enzymatic reactions connected to each other via their product and substrate metabolites.
A discipline concerned with studying biological phenomena in terms of the chemical and physical interactions of molecules.
The fundamental, structural, and functional units or subunits of living organisms. They are composed of CYTOPLASM containing various ORGANELLES and a CELL MEMBRANE boundary.
Theoretical representations that simulate the behavior or activity of biological processes or diseases. For disease models in living animals, DISEASE MODELS, ANIMAL is available. Biological models include the use of mathematical equations, computers, and other electronic equipment.
A species of gram-negative, facultatively anaerobic, rod-shaped bacteria (GRAM-NEGATIVE FACULTATIVELY ANAEROBIC RODS) commonly found in the lower part of the intestine of warm-blooded animals. It is usually nonpathogenic, but some strains are known to produce DIARRHEA and pyogenic infections. Pathogenic strains (virotypes) are classified by their specific pathogenic mechanisms such as toxins (ENTEROTOXIGENIC ESCHERICHIA COLI), etc.
The use of computers for designing and/or manufacturing of anything, including drugs, surgical procedures, orthotics, and prosthetics.
Computers whose input, output and state transitions are carried out by biochemical interactions and reactions.
The study of microorganisms such as fungi, bacteria, algae, archaea, and viruses.
A genus of gram negative, aerobic, rod-shaped bacteria found in soil, plants, and marine mud.
The application of scientific knowledge to practical purposes in any field. It includes methods, techniques, and instrumentation.
A mechanism of communication with a physiological system for homeostasis, adaptation, etc. Physiological feedback is mediated through extensive feedback mechanisms that use physiological cues as feedback loop signals to control other systems.
Organisms whose GENOME has been changed by a GENETIC ENGINEERING technique.
Theoretical representations that simulate the behavior or activity of genetic processes or phenomena. They include the use of mathematical equations, computers, and other electronic equipment.
Sets of enzymatic reactions occurring in organisms and that form biochemicals by making new covalent bonds.
A deoxyribonucleotide polymer that is the primary genetic material of all cells. Eukaryotic and prokaryotic organisms normally contain DNA in a double-stranded state, yet several important biological processes transiently involve single-stranded regions. DNA, which consists of a polysugar-phosphate backbone possessing projections of purines (adenine and guanine) and pyrimidines (thymine and cytosine), forms a double helix that is held together by hydrogen bonds between these purines and pyrimidines (adenine to thymine and guanine to cytosine).
The moral obligations governing the conduct of research. Used for discussions of research ethics as a general topic.
Sequential operating programs and data which instruct the functioning of a digital computer.
One of the three domains of life (the others being Eukarya and ARCHAEA), also called Eubacteria. They are unicellular prokaryotic microorganisms which generally possess rigid cell walls, multiply by cell division, and exhibit three principal forms: round or coccal, rodlike or bacillary, and spiral or spirochetal. Bacteria can be classified by their response to OXYGEN: aerobic, anaerobic, or facultatively anaerobic; by the mode by which they obtain their energy: chemotrophy (via chemical reaction) or PHOTOTROPHY (via light reaction); for chemotrophs by their source of chemical energy: CHEMOLITHOTROPHY (from inorganic compounds) or chemoorganotrophy (from organic compounds); and by their source for CARBON; NITROGEN; etc.; HETEROTROPHY (from organic sources) or AUTOTROPHY (from CARBON DIOXIDE). They can also be classified by whether or not they stain (based on the structure of their CELL WALLS) with CRYSTAL VIOLET dye: gram-negative or gram-positive.
The study of fluid channels and chambers of tiny dimensions of tens to hundreds of micrometers and volumes of nanoliters or picoliters. This is of interest in biological MICROCIRCULATION and used in MICROCHEMISTRY and INVESTIGATIVE TECHNIQUES.
Bacterial repressor proteins that bind to the LAC OPERON and thereby prevent the synthesis of proteins involved in catabolism of LACTOSE. When lactose levels are high lac repressors undergo an allosteric change that causes their release from the DNA and the resumption of lac operon transcription.
The techniques used to produce molecules exhibiting properties that conform to the demands of the experimenter. These techniques combine methods of generating structural changes with methods of selection. They are also used to examine proposed mechanisms of evolution under in vitro selection conditions.
A procedure consisting of a sequence of algebraic formulas and/or logical steps to calculate or determine a given task.
Nucleotide sequences, generated by iterative rounds of SELEX APTAMER TECHNIQUE, that bind to a target molecule specifically and with high affinity.
Controlled operation of an apparatus, process, or system by mechanical or electronic devices that take the place of human organs of observation, effort, and decision. (From Webster's Collegiate Dictionary, 1993)
Computer-based representation of physical systems and phenomena such as chemical processes.
Descriptions of specific amino acid, carbohydrate, or nucleotide sequences which have appeared in the published literature and/or are deposited in and maintained by databanks such as GENBANK, European Molecular Biology Laboratory (EMBL), National Biomedical Research Foundation (NBRF), or other sequence repositories.
The field of biology which deals with the process of the growth and differentiation of an organism.
The genetic complement of an organism, including all of its GENES, as represented in its DNA, or in some cases, its RNA.

Co-design in synthetic biology: a system-level analysis of the development of an environmental sensing device. (1/256)

The concept of co-design is common in engineering, where it is necessary, for example, to determine the optimal partitioning between hardware and software of the implementation of a system features. Here we propose to adapt co-design methodologies for synthetic biology. As a test case, we have designed an environmental sensing device that detects the presence of three chemicals, and returns an output only if at least two of the three chemicals are present. We show that the logical operations can be implemented in three different design domains: (1) the transcriptional domain using synthetically designed hybrid promoters, (2) the protein domain using bi-molecular fluorescence complementation, and (3) the fluorescence domain using spectral unmixing and relying on electronic processing. We discuss how these heterogeneous design strategies could be formalized to develop co-design algorithms capable of identifying optimal designs meeting user specifications.  (+info)

A computational model of gene expression in an inducible synthetic circuit. (2/256)

Synthetic biology aims to the rational design of gene circuits with predictable behaviours. Great efforts have been done so far to introduce in the field mathematical models that could facilitate the design of synthetic networks. Here we present a mathematical model of a synthetic gene-circuit with a negative feedback. The closed loop configuration allows the control of transcription by an inducer molecule (IPTG). Escherichia coli bacterial cells were transformed and expression of a fluorescent reporter (GFP) was measured for different inducer levels. Computer model simulations well reproduced the experimental induction data, using a single fitting parameter. Independent genetic components were used to assemble the synthetic circuit. The mathematical model here presented could be useful to predict how changes in these genetic components affect the behaviour of the synthetic circuit.  (+info)

Retrovirus HTLV-1 gene circuit: a potential oscillator for eukaryotes. (3/256)

Retrovirus HTLV-1 gene circuit is characterized by positive and negative feedback phenomena, thus candidating it as a potential relaxation oscillator deliverable into eukaryotes. Here we describe a model of HTLV-1 which, by providing predictions of genes and proteins kinetics, can be helpful for designing gene circuits for eukaryotes, or for optimizing gene therapy approaches which are currently carried out by means of lentiviral vectors or re-engineered adenoviruses. Oscillatory patterns of HTLV-1 gene circuit are predicted when positive feedback is faster than negative feedback. Techniques to mutate the retroviral genome in order to implement practically the above conditions are discussed. Finally, the effect of stochasticity on the system behavior is tested by means of Gillespie algorithm. Simulations show the difficulties to preserve synchronization in viral expression for a multiplicity of cells, while the long tail of the density probability function of the master regulator gene tax/rex, due to its steady state fluctuations, suggests an activation mechanism of HTLV-1 similar to that recently proposed for HIV(1): the virus tends to latency but under certain circumstances, the master regulator gene reaches high values of expression, whose persistence induces the viral replication.  (+info)

Emulsion based selection of T7 promoters of varying activity. (4/256)

The ability to build and control complex biological systems is greatly enhanced by the generation of related parts with varying strengths. In this way, various parts can be strung together and the connectivity and expression levels can be matched for the desired system performance. Engineered gene circuits, both in vivo and in vitro, often utilize the T7 RNA polymerase in tandem with the T7 promoter for transcription. In this work, we describe the selection of T7 promoter variants of varying strength by emulsifying in vitro transcription with subsequent fluorescence activated cell sorting (FACS) to enrich for active promoters. Such variant promoters should be of use to synthetic biologists for both in vivo and in vitro applications.  (+info)

Writing and compiling code into biochemistry. (5/256)

This paper presents a methodology for translating iterative arithmetic computation, specified as high-level programming constructs, into biochemical reactions. From an input/output specification, we generate biochemical reactions that produce output quantities of proteins as a function of input quantities performing operations such as addition, subtraction, and scalar multiplication. Iterative constructs such as "while" loops and "for" loops are implemented by transferring quantities between protein types, based on a clocking mechanism. Synthesis first is performed at a conceptual level, in terms of abstract biochemical reactions - a task analogous to high-level program compilation. Then the results are mapped onto specific biochemical reactions selected from libraries - a task analogous to machine language compilation. We demonstrate our approach through the compilation of a variety of standard iterative functions: multiplication, exponentiation, discrete logarithms, raising to a power, and linear transforms on time series. The designs are validated through transient stochastic simulation of the chemical kinetics. We are exploring DNA-based computation via strand displacement as a possible experimental chassis.  (+info)

Synthesis of pharmacokinetic pathways through knowledge acquisition and automated reasoning. (6/256)

Biological pathways are seen as highly critical in our understanding of the mechanism of biological functions. To collect information about pathways, manual curation has been the most popular method. However, pathway annotation is regarded as heavily time-consuming, as it requires expert curators to identify and collect information from different sources. Even with the pieces of biological facts and interactions collected from various sources, curators have to apply their biological knowledge to arrange the acquired interactions in such a way that together they perform a common biological function as a pathway. In this paper, we propose a novel approach for automated pathway synthesis that acquires facts from hand-curated knowledge bases. To comprehend the incompleteness of the knowledge bases, our approach also obtains facts through automated extraction from Medline abstracts. An essential component of our approach is to apply logical reasoning to the acquired facts based on the biological knowledge about pathways. By representing such biological knowledge, the reasoning component is capable of assigning ordering to the acquired facts and interactions that is necessary for pathway synthesis. We demonstrate the feasibility of our approach with the development of a system that synthesizes pharmacokinetic pathways. We evaluate our approach by reconstructing the existing pharmacokinetic pathways available in PharmGKB. Our results show that not only that our approach is capable of synthesizing these pathways but also uncovering information that is not available in the manually annotated pathways.  (+info)

In silico biology. (7/256)

Rather than studying existent living systems, we can increasingly produce computer models that capture the salient aspects of life. This provides us with unprecedented opportunities to examine, manipulate, and explore biological phenomena, allowing us to investigate some of the deepest issues in biology.  (+info)

A comparative analysis of synthetic genetic oscillators. (8/256)

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Synthetic biology is not a medical term per se, but rather it falls under the broader field of biology and bioengineering. Synthetic biology is an interdisciplinary field that combines principles from biology, engineering, chemistry, physics, and computer science to design and construct new biological parts, devices, and systems that do not exist in nature or re-design existing natural biological systems for useful purposes.

In simpler terms, synthetic biology involves the creation of artificial biological components such as genes, proteins, and cells, or the modification of existing ones to perform specific functions. These engineered biological systems can be used for a wide range of applications, including medical research, diagnostics, therapeutics, and environmental remediation.

Examples of synthetic biology in medicine include the development of synthetic gene circuits that can detect and respond to disease-causing agents or the creation of artificial cells that can produce therapeutic proteins or drugs. However, it's important to note that while synthetic biology holds great promise for improving human health, it also raises ethical, safety, and regulatory concerns that need to be carefully considered and addressed.

Bioengineering, also known as biological engineering, is defined as the application of principles and methods from engineering to study, modify, and control biological systems, often with the goal of creating new technologies or improving existing ones. This field combines knowledge and expertise from various disciplines, including biology, chemistry, physics, mathematics, and computer science, to solve complex problems related to health, medicine, agriculture, and the environment.

Bioengineers may work on a wide range of projects, such as developing new medical devices or therapies, designing synthetic biological systems for industrial applications, creating biosensors for environmental monitoring, or engineering tissues and organs for transplantation. They use a variety of tools and techniques, including genetic engineering, biomaterials, computational modeling, and nanotechnology, to design and build novel biological systems that can perform specific functions or solve practical problems.

Bioengineering has the potential to transform many areas of science and technology, with significant implications for human health, sustainability, and innovation. As such, it is an exciting and rapidly growing field that offers many opportunities for interdisciplinary collaboration and discovery.

Genetic engineering, also known as genetic modification, is a scientific process where the DNA or genetic material of an organism is manipulated to bring about a change in its characteristics. This is typically done by inserting specific genes into the organism's genome using various molecular biology techniques. These new genes may come from the same species (cisgenesis) or a different species (transgenesis). The goal is to produce a desired trait, such as resistance to pests, improved nutritional content, or increased productivity. It's widely used in research, medicine, and agriculture. However, it's important to note that the use of genetically engineered organisms can raise ethical, environmental, and health concerns.

Artificial cells are synthetic constructs that mimic certain functions or structures of natural living cells. They can be created using a variety of materials and methods, including lipid vesicles, polymers, and biomaterials. Artificial cells may be designed to perform specific tasks, such as delivering drugs, sensing environmental changes, or producing chemicals.

It's important to note that artificial cells are not living organisms and do not possess all the functions of natural cells. They also differ from cellular machinery or organelles that can be isolated from natural cells and used for specific purposes. Artificial cells are a topic of ongoing research in fields such as biomedicine, bioengineering, and nanotechnology.

Biotechnology is defined in the medical field as a branch of technology that utilizes biological processes, organisms, or systems to create products that are technologically useful. This can include various methods and techniques such as genetic engineering, cell culture, fermentation, and others. The goal of biotechnology is to harness the power of biology to produce drugs, vaccines, diagnostic tests, biofuels, and other industrial products, as well as to advance our understanding of living systems for medical and scientific research.

The use of biotechnology has led to significant advances in medicine, including the development of new treatments for genetic diseases, improved methods for diagnosing illnesses, and the creation of vaccines to prevent infectious diseases. However, it also raises ethical and societal concerns related to issues such as genetic modification of organisms, cloning, and biosecurity.

Systems Biology is a multidisciplinary approach to studying biological systems that involves the integration of various scientific disciplines such as biology, mathematics, physics, computer science, and engineering. It aims to understand how biological components, including genes, proteins, metabolites, cells, and organs, interact with each other within the context of the whole system. This approach emphasizes the emergent properties of biological systems that cannot be explained by studying individual components alone. Systems biology often involves the use of computational models to simulate and predict the behavior of complex biological systems and to design experiments for testing hypotheses about their functioning. The ultimate goal of systems biology is to develop a more comprehensive understanding of how biological systems function, with applications in fields such as medicine, agriculture, and bioengineering.

Synthetic genes are artificially created DNA (deoxyribonucleic acid) molecules that do not exist in nature. They are designed and constructed through genetic engineering techniques to encode specific functionalities or properties that do not occur in the original organism's genome. These synthetic genes can be used for various purposes, such as introducing new traits into organisms, producing novel enzymes or proteins, or developing new biotechnological applications.

The creation of synthetic genes involves designing and synthesizing DNA sequences that code for desired proteins or regulatory elements. This is achieved through chemical synthesis methods or using automated DNA synthesizers that can produce short DNA fragments, which are then assembled into longer sequences to form the complete synthetic gene. Once created, these synthetic genes can be introduced into living cells through various techniques like transfection or transformation, enabling the expression of the desired protein or functional trait.

Biology is the scientific study of living organisms and their vital processes. It deals with the characteristics, classification, and behaviors of plants, animals, and microorganisms, as well as how they interact with each other and the environment. Biology covers a wide range of topics, including genetics, cell biology, evolution, ecology, and physiology. The goal of biological research is to understand the fundamental principles that govern the functioning of living systems and to apply this knowledge to improve human health, agriculture, and the environment.

Cell physiological processes refer to the functional activities and biochemical reactions that occur within a cell to maintain its survival, growth, and reproduction. These processes are essential for the overall functioning of an organism and can be categorized into several key areas:

1. Metabolism: This is the sum total of all chemical reactions that occur within a cell, including catabolic reactions (breaking down molecules to release energy) and anabolic reactions (building up molecules for growth and repair).
2. Homeostasis: Cells maintain a stable internal environment by regulating various factors such as pH, temperature, and ion balance through processes like osmoregulation, buffering systems, and active transport.
3. Signal Transduction: Cells communicate with each other and respond to external stimuli through signal transduction pathways that involve the binding of signaling molecules to receptors, activation of intracellular signaling cascades, and regulation of gene expression.
4. Cell Cycle and Division: Cells grow and divide through a series of coordinated events known as the cell cycle, which includes DNA replication, chromosome segregation, and cytokinesis.
5. Apoptosis: This is a programmed cell death process that eliminates damaged or unnecessary cells to maintain tissue homeostasis and prevent the development of cancer.
6. Motility and Chemotaxis: Some cells have the ability to move and migrate in response to chemical gradients, which is important for processes such as embryonic development, wound healing, and immune responses.
7. Autophagy: This is a process by which cells recycle their own damaged or dysfunctional organelles and proteins through lysosomal degradation.

Overall, cell physiological processes are highly regulated and interconnected, allowing cells to adapt to changing environmental conditions and maintain the health and function of an organism.

Biofuels are defined as fuels derived from organic materials such as plants, algae, and animal waste. These fuels can be produced through various processes, including fermentation, esterification, and transesterification. The most common types of biofuels include biodiesel, ethanol, and biogas.

Biodiesel is a type of fuel that is produced from vegetable oils or animal fats through a process called transesterification. It can be used in diesel engines with little or no modification and can significantly reduce greenhouse gas emissions compared to traditional fossil fuels.

Ethanol is a type of alcohol that is produced through the fermentation of sugars found in crops such as corn, sugarcane, and switchgrass. It is typically blended with gasoline to create a fuel known as E85, which contains 85% ethanol and 15% gasoline.

Biogas is a type of fuel that is produced through the anaerobic digestion of organic materials such as food waste, sewage sludge, and agricultural waste. It is composed primarily of methane and carbon dioxide and can be used to generate electricity or heat.

Overall, biofuels offer a renewable and more sustainable alternative to traditional fossil fuels, helping to reduce greenhouse gas emissions and decrease dependence on non-renewable resources.

Protein engineering is a branch of molecular biology that involves the modification of proteins to achieve desired changes in their structure and function. This can be accomplished through various techniques, including site-directed mutagenesis, gene shuffling, directed evolution, and rational design. The goal of protein engineering may be to improve the stability, activity, specificity, or other properties of a protein for therapeutic, diagnostic, industrial, or research purposes. It is an interdisciplinary field that combines knowledge from genetics, biochemistry, structural biology, and computational modeling.

Synthetic chemistry techniques refer to the methods and processes used in the laboratory to synthesize or create new chemical compounds or molecules. This can involve a wide range of procedures, including various types of reactions, separations, purifications, and characterizations. The goal of synthetic chemistry is often to produce a specific compound with desired properties, such as a drug molecule with therapeutic activity or a materials compound with unique physical or chemical characteristics. Synthetic chemists use their knowledge of organic, inorganic, physical, and analytical chemistry to design and execute efficient and effective syntheses, and they may employ automation, computational modeling, and other advanced tools to aid in their work.

Genetic enhancement is not a term that is widely used in the medical community, and its definition can vary depending on the context. However, in general, genetic enhancement refers to the use of genetic engineering technologies to modify or improve certain traits or characteristics beyond their normal range for the purpose of improving an individual's capabilities, performance, or appearance. This may involve altering the genes of embryos, sperm, eggs, or adult cells to create individuals with enhanced physical, cognitive, or behavioral abilities.

It is important to note that genetic enhancement is a controversial topic and is not currently practiced in humans due to ethical concerns and scientific limitations. While some argue that genetic enhancement could lead to significant benefits for society, such as improved health, intelligence, and athletic performance, others worry about the potential risks and negative consequences, including increased inequality, loss of individuality, and unintended health effects.

Biological warfare agents are pathogenic organisms or toxins that are intentionally used in a military conflict or act of terrorism to cause disease, death, or disruption. These agents can be bacteria, viruses, fungi, or toxins produced by living organisms. They can be spread through the air, water, or food and can cause a range of illnesses, from mild symptoms to serious diseases that can be fatal if left untreated.

Biological warfare agents are considered weapons of mass destruction because they have the potential to cause widespread harm and panic. The use of such agents is prohibited by international law, and their production, storage, and transportation are closely monitored and regulated. Despite these efforts, there remains a risk that biological warfare agents could be used in acts of terrorism or other hostile actions.

Gene Regulatory Networks (GRNs) are complex systems of molecular interactions that regulate the expression of genes within an organism. These networks consist of various types of regulatory elements, including transcription factors, enhancers, promoters, and silencers, which work together to control when, where, and to what extent a gene is expressed.

In GRNs, transcription factors bind to specific DNA sequences in the regulatory regions of target genes, either activating or repressing their transcription into messenger RNA (mRNA). This process is influenced by various intracellular and extracellular signals that modulate the activity of transcription factors, allowing for precise regulation of gene expression in response to changing environmental conditions.

The structure and behavior of GRNs can be represented as a network of nodes (genes) and edges (regulatory interactions), with the strength and directionality of these interactions determined by the specific molecular mechanisms involved. Understanding the organization and dynamics of GRNs is crucial for elucidating the underlying causes of various biological processes, including development, differentiation, homeostasis, and disease.

Metabolic engineering is a branch of biotechnology that involves the modification and manipulation of metabolic pathways in organisms to enhance their production of specific metabolites or to alter their flow of energy and carbon. This field combines principles from genetics, molecular biology, biochemistry, and chemical engineering to design and construct novel metabolic pathways or modify existing ones with the goal of optimizing the production of valuable compounds or improving the properties of organisms for various applications.

Examples of metabolic engineering include the modification of microorganisms to produce biofuels, pharmaceuticals, or industrial chemicals; the enhancement of crop yields and nutritional value in agriculture; and the development of novel bioremediation strategies for environmental pollution control. The ultimate goal of metabolic engineering is to create organisms that can efficiently and sustainably produce valuable products while minimizing waste and reducing the impact on the environment.

"Energy-generating resources" is a broad term that refers to various methods and technologies used to convert different forms of energy into electricity or other useful forms. While there isn't a specific medical definition for this term, it is often discussed in the context of public health and environmental medicine due to its impact on air quality, climate change, and human health. Here are some examples of energy-generating resources:

1. Fossil fuels: These include coal, oil, and natural gas, which are non-renewable resources. They are burned to produce heat, which is then converted into electricity. The combustion process releases greenhouse gases and pollutants, contributing to climate change and air pollution-related health issues.
2. Nuclear power: This energy source involves the fission of atomic nuclei to generate heat, which is used to produce steam and drive turbines for electricity generation. While nuclear power itself does not emit greenhouse gases, it poses potential risks associated with radioactive waste disposal, accidents, and proliferation.
3. Renewable resources: These are sustainable energy sources that can be replenished naturally over time. Examples include solar power (photovoltaic or concentrated), wind power, hydroelectric power, geothermal energy, and biomass. These resources have lower environmental impacts and contribute less to air pollution and climate change compared to fossil fuels.
4. Hydrogen fuel cells: These devices convert chemical energy from hydrogen into electricity through an electrochemical reaction with oxygen or another oxidizing agent. They are clean energy sources, as the only byproducts are water and heat. However, the production of hydrogen can have environmental impacts depending on the method used (e.g., steam methane reforming vs. electrolysis powered by renewable energy).
5. Energy storage systems: While not a primary source of energy generation, energy storage technologies like batteries and capacitors play an essential role in optimizing the use of energy-generating resources. They can store excess energy produced during periods of low demand or high resource availability (e.g., solar power during the day) and release it during peak demand or resource scarcity, improving overall system efficiency and reducing the need for backup generation from fossil fuels.

In summary, "energy-generating resources" refer to various methods used to convert different forms of energy into electricity or other useful forms. The environmental and health impacts of these resources vary significantly, with renewable sources generally having lower impacts compared to fossil fuel-based options.

Computational biology is a branch of biology that uses mathematical and computational methods to study biological data, models, and processes. It involves the development and application of algorithms, statistical models, and computational approaches to analyze and interpret large-scale molecular and phenotypic data from genomics, transcriptomics, proteomics, metabolomics, and other high-throughput technologies. The goal is to gain insights into biological systems and processes, develop predictive models, and inform experimental design and hypothesis testing in the life sciences. Computational biology encompasses a wide range of disciplines, including bioinformatics, systems biology, computational genomics, network biology, and mathematical modeling of biological systems.

Metabolic networks and pathways refer to the complex interconnected series of biochemical reactions that occur within cells to maintain life. These reactions are catalyzed by enzymes and are responsible for the conversion of nutrients into energy, as well as the synthesis and breakdown of various molecules required for cellular function.

A metabolic pathway is a series of chemical reactions that occur in a specific order, with each reaction being catalyzed by a different enzyme. These pathways are often interconnected, forming a larger network of interactions known as a metabolic network.

Metabolic networks can be represented as complex diagrams or models, which show the relationships between different pathways and the flow of matter and energy through the system. These networks can help researchers to understand how cells regulate their metabolism in response to changes in their environment, and how disruptions to these networks can lead to disease.

Some common examples of metabolic pathways include glycolysis, the citric acid cycle (also known as the Krebs cycle), and the pentose phosphate pathway. Each of these pathways plays a critical role in maintaining cellular homeostasis and providing energy for cellular functions.

Molecular biology is a branch of biology that deals with the structure, function, and organization of molecules involved in biological processes, especially informational molecules such as DNA, RNA, and proteins. It includes the study of molecular mechanisms of genetic inheritance, gene expression, protein synthesis, and cellular regulation. Molecular biology also involves the use of various experimental techniques to investigate and manipulate these molecules, including recombinant DNA technology, genomic sequencing, protein crystallography, and bioinformatics. The ultimate goal of molecular biology is to understand how biological systems work at a fundamental level and to apply this knowledge to improve human health and the environment.

A cell is the basic structural and functional unit of all living organisms, excluding certain viruses. Cells are typically membrane-bound entities that contain genetic material (DNA or RNA), ribosomes, and other organelles that carry out various metabolic functions necessary for the survival and reproduction of the organism.

Cells can vary in size, shape, and complexity depending on the type of organism they belong to. In multicellular organisms, different cells specialize in performing specific functions, leading to a high degree of organization and cooperation within tissues and organs.

There are two main types of cells: prokaryotic cells (such as bacteria) and eukaryotic cells (such as those found in plants, animals, and fungi). Prokaryotic cells are simpler in structure and lack membrane-bound organelles, while eukaryotic cells have a more complex organization and contain various specialized structures enclosed within membranes.

Understanding the properties and behaviors of cells is crucial for understanding life at its most fundamental level and has important implications for fields such as medicine, biotechnology, and agriculture.

Biological models, also known as physiological models or organismal models, are simplified representations of biological systems, processes, or mechanisms that are used to understand and explain the underlying principles and relationships. These models can be theoretical (conceptual or mathematical) or physical (such as anatomical models, cell cultures, or animal models). They are widely used in biomedical research to study various phenomena, including disease pathophysiology, drug action, and therapeutic interventions.

Examples of biological models include:

1. Mathematical models: These use mathematical equations and formulas to describe complex biological systems or processes, such as population dynamics, metabolic pathways, or gene regulation networks. They can help predict the behavior of these systems under different conditions and test hypotheses about their underlying mechanisms.
2. Cell cultures: These are collections of cells grown in a controlled environment, typically in a laboratory dish or flask. They can be used to study cellular processes, such as signal transduction, gene expression, or metabolism, and to test the effects of drugs or other treatments on these processes.
3. Animal models: These are living organisms, usually vertebrates like mice, rats, or non-human primates, that are used to study various aspects of human biology and disease. They can provide valuable insights into the pathophysiology of diseases, the mechanisms of drug action, and the safety and efficacy of new therapies.
4. Anatomical models: These are physical representations of biological structures or systems, such as plastic models of organs or tissues, that can be used for educational purposes or to plan surgical procedures. They can also serve as a basis for developing more sophisticated models, such as computer simulations or 3D-printed replicas.

Overall, biological models play a crucial role in advancing our understanding of biology and medicine, helping to identify new targets for therapeutic intervention, develop novel drugs and treatments, and improve human health.

'Escherichia coli' (E. coli) is a type of gram-negative, facultatively anaerobic, rod-shaped bacterium that commonly inhabits the intestinal tract of humans and warm-blooded animals. It is a member of the family Enterobacteriaceae and one of the most well-studied prokaryotic model organisms in molecular biology.

While most E. coli strains are harmless and even beneficial to their hosts, some serotypes can cause various forms of gastrointestinal and extraintestinal illnesses in humans and animals. These pathogenic strains possess virulence factors that enable them to colonize and damage host tissues, leading to diseases such as diarrhea, urinary tract infections, pneumonia, and sepsis.

E. coli is a versatile organism with remarkable genetic diversity, which allows it to adapt to various environmental niches. It can be found in water, soil, food, and various man-made environments, making it an essential indicator of fecal contamination and a common cause of foodborne illnesses. The study of E. coli has contributed significantly to our understanding of fundamental biological processes, including DNA replication, gene regulation, and protein synthesis.

Computer-Aided Design (CAD) is the use of computer systems to aid in the creation, modification, analysis, or optimization of a design. CAD software is used to create and manage designs in a variety of fields, such as architecture, engineering, and manufacturing. It allows designers to visualize their ideas in 2D or 3D, simulate how the design will function, and make changes quickly and easily. This can help to improve the efficiency and accuracy of the design process, and can also facilitate collaboration and communication among team members.

Molecular computers are a hypothetical concept in the field of computer science and nanotechnology, which involve the use of molecular-scale devices to perform computational operations. The idea is to create systems that can manipulate individual molecules or groups of molecules to process information, similar to how traditional computers use silicon-based transistors to process digital data.

The field of molecular computing is still in its infancy, and significant scientific and engineering challenges must be overcome before practical applications can be realized. However, researchers are actively exploring the potential of molecular computers for a variety of applications, including medical diagnostics, drug discovery, and environmental monitoring.

In summary, molecular computers refer to hypothetical computing devices that operate at the molecular scale, with the potential to revolutionize various fields, including medicine, once developed and perfected.

Microbiology is the branch of biology that deals with the study of microorganisms, which are tiny living organisms including bacteria, viruses, fungi, parasites, algae, and some types of yeasts and molds. These organisms are usually too small to be seen with the naked eye and require the use of a microscope for observation.

Microbiology encompasses various subdisciplines, including bacteriology (the study of bacteria), virology (the study of viruses), mycology (the study of fungi), parasitology (the study of parasites), and protozoology (the study of protozoa).

Microbiologists study the structure, function, ecology, evolution, and classification of microorganisms. They also investigate their role in human health and disease, as well as their impact on the environment, agriculture, and industry. Microbiology has numerous applications in medicine, including the development of vaccines, antibiotics, and other therapeutic agents, as well as in the diagnosis and treatment of infectious diseases.

'Agrobacterium' is a genus of Gram-negative, rod-shaped bacteria that are known for their ability to genetically transform plants. The most well-known species in this genus is 'Agrobacterium tumefaciens,' which causes a plant disease called crown gall. This bacterium has the natural ability to transfer a portion of its own DNA (called T-DNA) into the plant's genome, leading to the overproduction of certain plant hormones and ultimately resulting in the formation of tumor-like growths on the infected plant tissue.

This unique ability to transfer genetic material between species has made 'Agrobacterium' a valuable tool in molecular biology and genetic engineering. Scientists can use this bacterium as a vector to introduce foreign DNA into plants, allowing for the study and manipulation of plant genes. This technique is widely used in research and agriculture to create genetically modified organisms (GMOs) with desired traits such as resistance to pests, improved nutritional content, or increased yield.

I'm sorry for any confusion, but "technology" is a broad term that refers to the application of scientific knowledge for practical purposes, especially in industry. It's not something that typically has a medical definition, as it's not a medical term or concept. However, in the context of healthcare, "health technology" is a term used to refer to the application of technology in healthcare, such as medical devices, electronic health records, telemedicine platforms, and other tools that are used to prevent, diagnose, or treat medical conditions.

Physiological feedback, also known as biofeedback, is a technique used to train an individual to become more aware of and gain voluntary control over certain physiological processes that are normally involuntary, such as heart rate, blood pressure, skin temperature, muscle tension, and brain activity. This is done by using specialized equipment to measure these processes and provide real-time feedback to the individual, allowing them to see the effects of their thoughts and actions on their body. Over time, with practice and reinforcement, the individual can learn to regulate these processes without the need for external feedback.

Physiological feedback has been found to be effective in treating a variety of medical conditions, including stress-related disorders, headaches, high blood pressure, chronic pain, and anxiety disorders. It is also used as a performance enhancement technique in sports and other activities that require focused attention and physical control.

Genetically modified organisms (GMOs) are organisms whose genetic material has been altered using genetic engineering techniques. This can include the insertion, deletion, or modification of specific genes to achieve desired traits. In the context of medical definitions, GMOs are often used in research, biomedicine, and pharmaceutical production.

For example, genetically modified bacteria or yeast can be used to produce therapeutic proteins, such as insulin or vaccines. Genetic modification can also be used to create animal models of human diseases, allowing researchers to study disease mechanisms and test new therapies in a controlled setting. Additionally, GMOs are being explored for their potential use in gene therapy, where they can be engineered to deliver therapeutic genes to specific cells or tissues in the body.

It's important to note that while genetically modified organisms have shown great promise in many areas of medicine and biotechnology, there are also concerns about their potential impacts on human health and the environment. Therefore, their development and use are subject to strict regulations and oversight.

Genetic models are theoretical frameworks used in genetics to describe and explain the inheritance patterns and genetic architecture of traits, diseases, or phenomena. These models are based on mathematical equations and statistical methods that incorporate information about gene frequencies, modes of inheritance, and the effects of environmental factors. They can be used to predict the probability of certain genetic outcomes, to understand the genetic basis of complex traits, and to inform medical management and treatment decisions.

There are several types of genetic models, including:

1. Mendelian models: These models describe the inheritance patterns of simple genetic traits that follow Mendel's laws of segregation and independent assortment. Examples include autosomal dominant, autosomal recessive, and X-linked inheritance.
2. Complex trait models: These models describe the inheritance patterns of complex traits that are influenced by multiple genes and environmental factors. Examples include heart disease, diabetes, and cancer.
3. Population genetics models: These models describe the distribution and frequency of genetic variants within populations over time. They can be used to study evolutionary processes, such as natural selection and genetic drift.
4. Quantitative genetics models: These models describe the relationship between genetic variation and phenotypic variation in continuous traits, such as height or IQ. They can be used to estimate heritability and to identify quantitative trait loci (QTLs) that contribute to trait variation.
5. Statistical genetics models: These models use statistical methods to analyze genetic data and infer the presence of genetic associations or linkage. They can be used to identify genetic risk factors for diseases or traits.

Overall, genetic models are essential tools in genetics research and medical genetics, as they allow researchers to make predictions about genetic outcomes, test hypotheses about the genetic basis of traits and diseases, and develop strategies for prevention, diagnosis, and treatment.

Biosynthetic pathways refer to the series of biochemical reactions that occur within cells and living organisms, leading to the production (synthesis) of complex molecules from simpler precursors. These pathways involve a sequence of enzyme-catalyzed reactions, where each reaction builds upon the product of the previous one, ultimately resulting in the formation of a specific biomolecule.

Examples of biosynthetic pathways include:

1. The Krebs cycle (citric acid cycle) - an essential metabolic pathway that generates energy through the oxidation of acetyl-CoA derived from carbohydrates, fats, and proteins.
2. Glycolysis - a process that breaks down glucose into pyruvate to generate ATP and NADH.
3. Gluconeogenesis - the synthesis of glucose from non-carbohydrate precursors such as lactate, pyruvate, glycerol, and certain amino acids.
4. Fatty acid synthesis - a process that produces fatty acids from acetyl-CoA and malonyl-CoA through a series of reduction reactions.
5. Amino acid synthesis - the production of various amino acids from simpler precursors, often involving intermediates in central metabolic pathways like the Krebs cycle or glycolysis.
6. Steroid biosynthesis - the formation of steroids from simple precursors such as cholesterol and its derivatives.
7. Terpenoid biosynthesis - the production of terpenes, terpenoids, and sterols from isoprene units (isopentenyl pyrophosphate).
8. Nucleotide synthesis - the generation of nucleotides, the building blocks of DNA and RNA, through complex biochemical pathways involving various precursors and cofactors.

Understanding biosynthetic pathways is crucial for comprehending cellular metabolism, developing drugs that target specific metabolic processes, and engineering organisms with desired traits in synthetic biology and metabolic engineering applications.

Deoxyribonucleic acid (DNA) is the genetic material present in the cells of organisms where it is responsible for the storage and transmission of hereditary information. DNA is a long molecule that consists of two strands coiled together to form a double helix. Each strand is made up of a series of four nucleotide bases - adenine (A), guanine (G), cytosine (C), and thymine (T) - that are linked together by phosphate and sugar groups. The sequence of these bases along the length of the molecule encodes genetic information, with A always pairing with T and C always pairing with G. This base-pairing allows for the replication and transcription of DNA, which are essential processes in the functioning and reproduction of all living organisms.

Research ethics refers to the principles and guidelines that govern the conduct of research involving human participants or animals. The overarching goal of research ethics is to ensure that research is conducted in a way that respects the autonomy, dignity, and well-being of all those involved. Research ethics are designed to prevent harm, promote fairness, and maintain trust between researchers and study participants.

Some key principles of research ethics include:

1. Respect for Persons: This means treating all individuals with respect and dignity, and recognizing their autonomy and right to make informed decisions about participating in research.
2. Beneficence: Researchers have a duty to maximize the benefits of research while minimizing potential harms.
3. Justice: Research should be conducted fairly, without discrimination or bias, and should benefit all those who are affected by it.
4. Confidentiality: Researchers must protect the privacy and confidentiality of study participants, including their personal information and data.
5. Informed Consent: Participants must give their voluntary and informed consent to participate in research, after being fully informed about the nature of the study, its risks and benefits, and their rights as a participant.

Research ethics are typically overseen by institutional review boards (IRBs) or research ethics committees (RECs), which review research proposals and monitor ongoing studies to ensure that they comply with ethical guidelines. Researchers who violate these guidelines may face sanctions, including loss of funding, suspension or revocation of their research privileges, or legal action.

I am not aware of a widely accepted medical definition for the term "software," as it is more commonly used in the context of computer science and technology. Software refers to programs, data, and instructions that are used by computers to perform various tasks. It does not have direct relevance to medical fields such as anatomy, physiology, or clinical practice. If you have any questions related to medicine or healthcare, I would be happy to try to help with those instead!

Bacteria are single-celled microorganisms that are among the earliest known life forms on Earth. They are typically characterized as having a cell wall and no membrane-bound organelles. The majority of bacteria have a prokaryotic organization, meaning they lack a nucleus and other membrane-bound organelles.

Bacteria exist in diverse environments and can be found in every habitat on Earth, including soil, water, and the bodies of plants and animals. Some bacteria are beneficial to their hosts, while others can cause disease. Beneficial bacteria play important roles in processes such as digestion, nitrogen fixation, and biogeochemical cycling.

Bacteria reproduce asexually through binary fission or budding, and some species can also exchange genetic material through conjugation. They have a wide range of metabolic capabilities, with many using organic compounds as their source of energy, while others are capable of photosynthesis or chemosynthesis.

Bacteria are highly adaptable and can evolve rapidly in response to environmental changes. This has led to the development of antibiotic resistance in some species, which poses a significant public health challenge. Understanding the biology and behavior of bacteria is essential for developing strategies to prevent and treat bacterial infections and diseases.

Microfluidics is a multidisciplinary field that involves the study, manipulation, and control of fluids that are geometrically constrained to a small, typically sub-millimeter scale. It combines elements from physics, chemistry, biology, materials science, and engineering to design and fabricate microscale devices that can handle and analyze small volumes of fluids, often in the range of picoliters to microliters.

In medical contexts, microfluidics has numerous applications, including diagnostic testing, drug discovery, and personalized medicine. For example, microfluidic devices can be used to perform rapid and sensitive molecular assays for detecting pathogens or biomarkers in patient samples, as well as to screen drugs and evaluate their efficacy and toxicity in vitro.

Microfluidics also enables the development of organ-on-a-chip platforms that mimic the structure and function of human tissues and organs, allowing researchers to study disease mechanisms and test new therapies in a more physiologically relevant context than traditional cell culture models. Overall, microfluidics offers significant potential for improving healthcare outcomes by enabling faster, more accurate, and more cost-effective diagnostic and therapeutic strategies.

A lac repressor is a protein in the lactose operon system of the bacterium Escherichia coli (E. coli) that regulates the expression of genes responsible for lactose metabolism. The lac repressor binds to specific DNA sequences called operators, preventing the transcription of nearby structural genes when lactose is not present. When lactose is available, a molecule derived from lactose, allolactose, binds to the lac repressor, causing a conformational change that prevents it from binding to the operator, allowing transcription and gene expression. This regulatory mechanism ensures that the cells only produce the enzymes required for lactose metabolism when lactose is available as a food source.

Directed molecular evolution is a laboratory technique used to generate proteins or other molecules with desired properties through an iterative process that mimics natural evolution. This process typically involves the following steps:

1. Generation of a diverse library of variants: A population of molecules is created, usually by introducing random mutations into a parent sequence using techniques such as error-prone PCR or DNA shuffling. The resulting library contains a large number of different sequences, each with potentially unique properties.
2. Screening or selection for desired activity: The library is subjected to a screening or selection process that identifies molecules with the desired activity or property. This could involve an in vitro assay, high-throughput screening, or directed cell sorting.
3. Amplification and reiteration: Molecules that exhibit the desired activity are amplified, either by PCR or through cell growth, and then used as templates for another round of mutagenesis and selection. This process is repeated until the desired level of optimization is achieved.

Directed molecular evolution has been successfully applied to a wide range of molecules, including enzymes, antibodies, and aptamers, enabling the development of improved catalysts, biosensors, and therapeutics.

An algorithm is not a medical term, but rather a concept from computer science and mathematics. In the context of medicine, algorithms are often used to describe step-by-step procedures for diagnosing or managing medical conditions. These procedures typically involve a series of rules or decision points that help healthcare professionals make informed decisions about patient care.

For example, an algorithm for diagnosing a particular type of heart disease might involve taking a patient's medical history, performing a physical exam, ordering certain diagnostic tests, and interpreting the results in a specific way. By following this algorithm, healthcare professionals can ensure that they are using a consistent and evidence-based approach to making a diagnosis.

Algorithms can also be used to guide treatment decisions. For instance, an algorithm for managing diabetes might involve setting target blood sugar levels, recommending certain medications or lifestyle changes based on the patient's individual needs, and monitoring the patient's response to treatment over time.

Overall, algorithms are valuable tools in medicine because they help standardize clinical decision-making and ensure that patients receive high-quality care based on the latest scientific evidence.

Aptamers are short, single-stranded oligonucleotides (DNA or RNA) that bind to specific target molecules with high affinity and specificity. They are generated through an iterative process called Systematic Evolution of Ligands by EXponential enrichment (SELEX), where large libraries of randomized oligonucleotides are subjected to repeated rounds of selection and amplification until sequences with the desired binding properties are identified. Nucleotide aptamers have potential applications in various fields, including diagnostics, therapeutics, and research tools.

The term "nucleotide" refers to the basic building blocks of nucleic acids (DNA and RNA). A nucleotide consists of a pentose sugar (ribose for RNA and deoxyribose for DNA), a phosphate group, and a nitrogenous base. The nitrogenous bases in nucleotides are adenine, guanine, cytosine, thymine (in DNA) or uracil (in RNA). In aptamers, the nucleotide sequences form specific three-dimensional structures that enable them to recognize and bind to their target molecules.

Automation in the medical context refers to the use of technology and programming to allow machines or devices to operate with minimal human intervention. This can include various types of medical equipment, such as laboratory analyzers, imaging devices, and robotic surgical systems. Automation can help improve efficiency, accuracy, and safety in healthcare settings by reducing the potential for human error and allowing healthcare professionals to focus on higher-level tasks. It is important to note that while automation has many benefits, it is also essential to ensure that appropriate safeguards are in place to prevent accidents and maintain quality of care.

A computer simulation is a process that involves creating a model of a real-world system or phenomenon on a computer and then using that model to run experiments and make predictions about how the system will behave under different conditions. In the medical field, computer simulations are used for a variety of purposes, including:

1. Training and education: Computer simulations can be used to create realistic virtual environments where medical students and professionals can practice their skills and learn new procedures without risk to actual patients. For example, surgeons may use simulation software to practice complex surgical techniques before performing them on real patients.
2. Research and development: Computer simulations can help medical researchers study the behavior of biological systems at a level of detail that would be difficult or impossible to achieve through experimental methods alone. By creating detailed models of cells, tissues, organs, or even entire organisms, researchers can use simulation software to explore how these systems function and how they respond to different stimuli.
3. Drug discovery and development: Computer simulations are an essential tool in modern drug discovery and development. By modeling the behavior of drugs at a molecular level, researchers can predict how they will interact with their targets in the body and identify potential side effects or toxicities. This information can help guide the design of new drugs and reduce the need for expensive and time-consuming clinical trials.
4. Personalized medicine: Computer simulations can be used to create personalized models of individual patients based on their unique genetic, physiological, and environmental characteristics. These models can then be used to predict how a patient will respond to different treatments and identify the most effective therapy for their specific condition.

Overall, computer simulations are a powerful tool in modern medicine, enabling researchers and clinicians to study complex systems and make predictions about how they will behave under a wide range of conditions. By providing insights into the behavior of biological systems at a level of detail that would be difficult or impossible to achieve through experimental methods alone, computer simulations are helping to advance our understanding of human health and disease.

Molecular sequence data refers to the specific arrangement of molecules, most commonly nucleotides in DNA or RNA, or amino acids in proteins, that make up a biological macromolecule. This data is generated through laboratory techniques such as sequencing, and provides information about the exact order of the constituent molecules. This data is crucial in various fields of biology, including genetics, evolution, and molecular biology, allowing for comparisons between different organisms, identification of genetic variations, and studies of gene function and regulation.

Developmental biology is a branch of biological research that studies the processes by which organisms grow and develop from fertilized eggs (zygotes) to adults. This field of study encompasses understanding the genetic, epigenetic, environmental, and molecular mechanisms that guide the developmental trajectory of an organism, including cellular differentiation, pattern formation, morphogenesis, and growth control.

Developmental biology has important implications for understanding congenital disorders, regenerative medicine, and evolutionary biology. Researchers in this field use a variety of model organisms, such as fruit flies (Drosophila melanogaster), zebrafish (Danio rerio), mice (Mus musculus), and nematodes (Caenorhabditis elegans), to investigate the fundamental principles that govern developmental processes. These insights can then be applied to understanding human development and disease.

A genome is the complete set of genetic material (DNA, or in some viruses, RNA) present in a single cell of an organism. It includes all of the genes, both coding and noncoding, as well as other regulatory elements that together determine the unique characteristics of that organism. The human genome, for example, contains approximately 3 billion base pairs and about 20,000-25,000 protein-coding genes.

The term "genome" was first coined by Hans Winkler in 1920, derived from the word "gene" and the suffix "-ome," which refers to a complete set of something. The study of genomes is known as genomics.

Understanding the genome can provide valuable insights into the genetic basis of diseases, evolution, and other biological processes. With advancements in sequencing technologies, it has become possible to determine the entire genomic sequence of many organisms, including humans, and use this information for various applications such as personalized medicine, gene therapy, and biotechnology.

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A panel of past and present TR35/TR100 honorees discuss advances in biomedicine. Christopher Anderson, University of California, Berkeley Kristala L. Jones Prather, MIT Neil Renninger, Amyris Biotechnologies Ron Weiss, Princeton University Erika Jonietz, MIT Technology Review
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Synthetic Biology Synthetic biology brings together engineering and the life sciences in order to design and construct new ... Has the synthetic biology industry hijacked IUCN? Gates-funded synbio lobby firm Emerging Ag Inc takes driving seat in IUCN ... Synthetic biologists, engaged in a kind of extreme genetic engineering, hope to construct designer organisms that perform ...
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Biodefense in the Age of Synthetic Biology - Tom Slezak - Download as a PDF or view online for free ... Biodefense in the Age of Synthetic Biology - Tom Slezak. *1. Biodefense in the Age of Synthetic Biology Tom Slezak, KPATH ... But synthetic biology also presents new challenges • The potential unpredictability related to how a synthetic biology- enabled ... Benefits of Synthetic Biology The field of synthetic biology opens tremendous possibilities for the application of ...
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If there is one thing natural about synthetic biology, it will be the issues that will be in public domain for decisions to be ... Now, let us focus on a recent development in science - creating life forms de novo . Termed as synthetic biology, research ... India is yet to formally come up with its national strategy on synthetic biology - both policy and regulatory. In the absence ... In less than nine years, synthetic biology has caught the imagination of scientists and the industrys market of $11 billion in ...
Syllabus for Project in Laboratory Synthetic Biology II. The syllabus is valid from Spring 2017. ... plan and carry out a laboratory project in synthetic biology. *apply basic subject knowledge in biology, biotechnology and/or ... Laboratory sessions highlighting BioBrick cloning as a methodology in synthetic biology.. Instruction. The teaching is given in ... 120 credits in the Engineering programme in molecular biotechnology including Project in laboratory synthetic biology I or ...
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A new report by the ETC Group concludes that the social, environmental and bio-weapons threats of synthetic biology surpass the ... Extreme Genetic Engineering: An Introduction to Synthetic Biology. Submitted by ETC Staff on Tue, 2007-01-16 18:00. ... The full text of the 70-page report, Extreme Genetic Engineering: An Introduction to Synthetic Biology, is available for ... Other synthetic biologists hope to reconfigure the genetic pathways of existing organisms to perform new functions - such as ...
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"Its really easy to swap things in and out," says Lu, who is also a member of MITs Synthetic Biology Center. "If you start off ... "Almost all of the previous work in synthetic biology that were aware of has either focused on logic components or on memory ... Cell circuits remember their history: Engineers design new synthetic biology circuits that combine memory and logic. Date:. ... "I anticipate that the innovations reported here will help to inspire larger synthetic biology efforts that push the limits of ...
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Synthetic biology is taking the chemical industry by storm! Industry veteran Joel Stone shares what this will mean for consumer ... Synthetic biology is taking the chemical industry by storm! Industry veteran Joel Stone shares what this will mean for consumer ...
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