Pan paniscus
Pan troglodytes
Simian T-lymphotropic virus 1
Pongo pygmaeus
Gorilla gorilla
Hominidae
Intracommunity relationships, dispersal pattern and paternity success in a wild living community of Bonobos (Pan paniscus) determined from DNA analysis of faecal samples. (1/119)
Differences in social relationships among community members are often explained by differences in genetic relationships. The current techniques of DNA analysis allow explicit testing of such a hypothesis. Here, we have analysed the genetic relationships for a community of wild bonobos (Pan paniscus) using nuclear and mitochondrial DNA markers extracted from faecal samples. Bonobos show an opportunistic and promiscuous mating behaviour, even with mates from outside the community. Nonetheless, we find that most infants were sired by resident males and that two dominant males together attained the highest paternity success. Intriguingly, the latter males are the sons of high-ranking females, suggesting an important influence of mothers on the paternity success of their sons. The molecular data support previous inferences on female dispersal and male philopatry. We find a total of five different mitochondrial haplotypes among 15 adult females, suggesting a frequent migration of females. Moreover, for most adult and subadult males in the group we find a matching mother, while this is not the case for most females, indicating that these leave the community during adolescence. Our study demonstrates that faecal samples can be a useful source for the determination of kinship in a whole community. (+info)Extensive nuclear DNA sequence diversity among chimpanzees. (2/119)
Although data on nucleotide sequence variation in the human nuclear genome have begun to accumulate, little is known about genomic diversity in chimpanzees (Pan troglodytes) and bonobos (Pan paniscus). A 10,154-base pair sequence on the chimpanzee X chromosome is reported, representing all major subspecies and bonobos. Comparison to humans shows the diversity of the chimpanzee sequences to be almost four times as high and the age of the most recent common ancestor three times as great as the corresponding values of humans. Phylogenetic analyses show the sequences from the different chimpanzee subspecies to be intermixed and the distance between some chimpanzee sequences to be greater than the distance between them and the bonobo sequences. (+info)Chromosome 22-specific low copy repeats and the 22q11.2 deletion syndrome: genomic organization and deletion endpoint analysis. (3/119)
The 22q11.2 deletion syndrome, which includes DiGeorge and velocardiofacial syndromes (DGS/VCFS), is the most common microdeletion syndrome. The majority of deleted patients share a common 3 Mb hemizygous deletion of 22q11.2. The remaining patients include those who have smaller deletions that are nested within the 3 Mb typically deleted region (TDR) and a few with rare deletions that have no overlap with the TDR. The identification of chromosome 22-specific duplicated sequences or low copy repeats (LCRs) near the end-points of the 3 Mb TDR has led to the hypothesis that they mediate deletions of 22q11.2. The entire 3 Mb TDR has been sequenced, permitting detailed investigation of the LCRs and their involvement in the 22q11.2 deletions. Sequence analysis has identified four LCRs within the 3 Mb TDR. Although the LCRs differ in content and organization of shared modules, those modules that are common between them share 97-98% sequence identity with one another. By fluorescence in situ hybridization (FISH) analysis, the end-points of four variant 22q11.2 deletions appear to localize to the LCRs. Pulsed-field gel electrophoresis and Southern hybridization have been used to identify rearranged junction fragments from three variant deletions. Analysis of junction fragments by PCR and sequencing of the PCR products implicate the LCRs directly in the formation of 22q11.2 deletions. The evolutionary origin of the duplications on chromosome 22 has been assessed by FISH analysis of non-human primates. Multiple signals in Old World monkeys suggest that the duplication events may have occurred at least 20-25 million years ago. (+info)Mitochondrial DNA sequences in ancient Australians: Implications for modern human origins. (4/119)
DNA from ancient human remains provides perspectives on the origin of our species and the relationship between molecular and morphological variation. We report analysis of mtDNA from the remains of 10 ancient Australians. These include the morphologically gracile Lake Mungo 3 [ approximately 60 thousand years (ka) before present] and three other gracile individuals from Holocene deposits at Willandra Lakes (<10 ka), all within the skeletal range of living Australians, and six Pleistocene/early Holocene individuals (15 to <8 ka) from Kow Swamp with robust morphologies outside the skeletal range of contemporary indigenous Australians. Lake Mungo 3 is the oldest (Pleistocene) "anatomically modern" human from whom DNA has been recovered. His mtDNA belonged to a lineage that only survives as a segment inserted into chromosome 11 of the nuclear genome, which is now widespread among human populations. This lineage probably diverged before the most recent common ancestor of contemporary human mitochondrial genomes. This timing of divergence implies that the deepest known mtDNA lineage from an anatomically modern human occurred in Australia; analysis restricted to living humans places the deepest branches in East Africa. The other ancient Australian individuals we examined have mtDNA sequences descended from the most recent common ancestor of living humans. Our results indicate that anatomically modern humans were present in Australia before the complete fixation of the mtDNA lineage now found in all living people. Sequences from additional ancient humans may further challenge current concepts of modern human origins. (+info)Molecular analyses of oral polio vaccine samples. (5/119)
It has been suggested that the human immunodeficiency virus (HIV), and thus the acquired immunodeficiency syndrome (AIDS) it causes, was inadvertently introduced to humans by the use of an oral polio vaccine (OPV) during a vaccination campaign launched by the Wistar Institute, Philadelphia, PA, USA, in the Belgian Congo in 1958 and 1959. The "OPV/AIDS hypothesis" suggests that the OPV used in this campaign was produced in chimpanzee kidney epithelial cell cultures rather than in monkey kidney cell cultures, as stated by H. Koprowski and co-workers, who produced the OPV. If chimpanzee cells were indeed used, this would lend support to the OPV/AIDS hypothesis, since chimpanzees harbor a simian immunodeficiency virus, widely accepted to be the origin of HIV-1. We analyzed several early OPV pools and found no evidence for the presence of chimpanzee DNA; by contrast, monkey DNA is present. (+info)Sequence variation within the fragile X locus. (6/119)
The human genome provides a reference sequence, which is a template for resequencing studies that aim to discover and interpret the record of common ancestry that exists in extant genomes. To understand the nature and pattern of variation and linkage disequilibrium comprising this history, we present a study of approximately 31 kb spanning an approximately 70 kb region of FMR1, sequenced in a sample of 20 humans (worldwide sample) and four great apes (chimp, bonobo, and gorilla). Twenty-five polymorphic sites and two insertion/deletions, distributed in 11 unique haplotypes, were identified among humans. Africans are the only geographic group that do not share any haplotypes with other groups. Parsimony analysis reveals two main clades and suggests that the four major human geographic groups are distributed throughout the phylogenetic tree and within each major clade. An African sample appears to be most closely related to the common ancestor shared with the three other geographic groups. Nucleotide diversity, pi, for this sample is 2.63 +/- 6.28 x 10(-4). The mutation rate, mu is 6.48 x 10(-10) per base pair per year, giving an ancestral population size of approximately 6200 and a time to the most recent common ancestor of approximately 320,000 +/- 72,000 per base pair per year. Linkage disequilibrium (LD) at the FMR1 locus, evaluated by conventional LD analysis and by the length of segment shared between any two chromosomes, is extensive across the region. (+info)Excess of rare amino acid polymorphisms in the Toll-like receptor 4 in humans. (7/119)
The Toll-like receptor 4 protein acts as the transducing subunit of the lipopolysaccharide receptor complex and assists in the detection of Gram-negative pathogens within the mammalian host. Several lines of evidence support the view that variation at the TLR4 locus may alter host susceptibility to Gram-negative infection or the outcome of infection. Here, we surveyed TLR4 sequence variation in the complete coding region (2.4 kb) in 348 individuals from several population samples; in addition, a subset of the individuals was surveyed at 1.1 kb of intronic sequence. More than 90% of the chromosomes examined encoded the same structural isoform of TLR4, while the rest harbored 12 rare amino acid variants. Conversely, the variants at silent sites (intronic and synonymous positions) occur at both low and high frequencies and are consistent with a neutral model of mutation and random drift. The spectrum of allele frequencies for amino acid variants shows a significant skew toward lower frequencies relative to both the neutral model and the pattern observed at linked silent sites. This is consistent with the hypothesis that weak purifying selection acted on TLR4 and that most mutations affecting TLR4 protein structure have at least mildly deleterious phenotypic effects. These results may imply that genetic variants contributing to disease susceptibility occur at low frequencies in the population and suggest strategies for optimizing the design of disease-mapping studies. (+info)Asymmetric Broca's area in great apes. (8/119)
Brodmann's area 44 delineates part of Broca's area within the inferior frontal gyrus of the human brain and is a critical region for speech production, being larger in the left hemisphere than in the right - an asymmetry that has been correlated with language dominance. Here we show that there is a similar asymmetry in this area, also with left-hemisphere dominance, in three great ape species (Pan troglodytes, Pan paniscus and Gorilla gorilla). Our findings suggest that the neuroanatomical substrates for left-hemisphere dominance in speech production were evident at least five million years ago and are not unique to hominid evolution. (+info)I'm sorry for any confusion, but "Pan paniscus" is actually the scientific name for a species of primate, specifically the Bonobo or "Pygmy Chimpanzee." Here is the medical/scientific definition:
Pan paniscus, also known as the Bonobo or Pygmy Chimpanzee, is one of the two extant species in the genus Pan, the other being Pan troglodytes (the Common Chimpanzee). Bonobos are native to the Democratic Republic of Congo in Central Africa. They are smaller than Common Chimpanzees and have a more gracile build, darker coat, and distinctive hair parting down the middle of their head.
Bonobos share approximately 98.7% of their DNA with humans, making them our closest living relatives alongside Common Chimpanzees. They are highly social animals, living in complex fission-fusion communities with fluid membership. Bonobos exhibit unique behaviors such as sexual interactions to reduce tension and promote social bonding, which sets them apart from other primates, including Common Chimpanzees.
If you have any questions about veterinary medicine or animal health, please feel free to ask!
"Pan troglodytes" is the scientific name for a species of great apes known as the Common Chimpanzee. They are native to tropical rainforests in Western and Central Africa. Common Chimpanzees are our closest living relatives, sharing about 98.6% of our DNA. They are highly intelligent and social animals, capable of using tools, exhibiting complex behaviors, and displaying a range of emotions.
Here is a medical definition for 'Pan troglodytes':
The scientific name for the Common Chimpanzee species (genus Pan), a highly intelligent and social great ape native to tropical rainforests in Western and Central Africa. They are our closest living relatives, sharing approximately 98.6% of our DNA. Known for their complex behaviors, tool use, and emotional expression, Common Chimpanzees have been extensively studied in the fields of anthropology, psychology, and primatology to better understand human evolution and behavior.
Simian T-lymphotropic virus 1 (STLV-1) is a retrovirus that primarily infects Asian monkeys and apes. It is closely related to the human T-lymphotropic virus type 1 (HTLV-1), and there is evidence to suggest that STLV-1 may have been transmitted to humans through close contact with infected non-human primates, resulting in the emergence of HTLV-1.
Like HTLV-1, STLV-1 primarily infects CD4+ T lymphocytes and can cause a persistent infection. However, unlike HTLV-1, which is associated with several diseases including adult T-cell leukemia/lymphoma and tropical spastic paraparesis/HTLV-1-associated myelopathy (TSP/HAM), STLV-1 has not been definitively linked to any specific human diseases.
STLV-1 infection is typically asymptomatic in both monkeys and humans, but it can cause a range of clinical manifestations in some individuals, including lymphadenopathy, hepatitis, and neurological symptoms. The virus is primarily transmitted through contact with infected bodily fluids, such as blood, breast milk, and semen.
Research on STLV-1 is important for understanding the evolution and epidemiology of retroviruses, as well as for developing strategies to prevent transmission and manage related diseases in both humans and non-human primates.
"Pongo pygmaeus" is the scientific name for the Bornean orangutan, a great ape species native to the island of Borneo in Southeast Asia. They are one of the two species of orangutans, with the other being "Pongo abelii," the Sumatran orangutan. Bornean orangutans are highly intelligent and exhibit advanced tool use, social behaviors, and emotional expressions. They have a reddish-brown fur coat, long arms, and a distinctively shaped face. Unfortunately, they are critically endangered due to habitat loss and hunting.
"Gorilla gorilla" is the scientific name for the Western Gorilla, a subspecies of the Gorilla genus. Western Gorillas are divided into two subspecies: the Western Lowland Gorilla (Gorilla gorilla gorilla) and the Cross River Gorilla (Gorilla gorilla diehli). Western Gorillas are native to the forests of central Africa, with Western Lowland Gorillas found in countries such as Gabon, Cameroon, Congo, and Equatorial Guinea, and Cross River Gorillas having a more restricted range along the border region of Nigeria and Cameroon.
Western Lowland Gorillas are the most numerous and widespread of all gorilla subspecies, but they still face significant threats from habitat loss, poaching, and disease. Cross River Gorillas are one of the world's 25 most endangered primates, with only a few hundred individuals remaining in the wild. Conservation efforts are underway to protect both subspecies and their habitats, including anti-poaching patrols, habitat restoration, and community education programs.
Hominidae, also known as the "great apes," is a family of primates that includes humans (Homo sapiens), orangutans (Pongo pygmaeus), gorillas (Gorilla gorilla and Gorilla beringei), bonobos (Pan paniscus), and chimpanzees (Pan troglodytes). This family is characterized by their upright walking ability, although not all members exhibit this trait. Hominidae species are known for their high intelligence, complex social structures, and expressive facial features. They share a common ancestor with the Old World monkeys, and fossil records suggest that this split occurred around 25 million years ago.
Human T-lymphotropic virus 2 (HTLV-2) is a retrovirus that primarily infects CD4+ T lymphocytes and other cells of the immune system. It is a deltaretrovirus closely related to HTLV-1, but with distinct biological properties and geographic distribution.
HTLV-2 infection is usually asymptomatic, although some individuals may develop neurological or skin disorders. However, the association between HTLV-2 and these diseases is not as clear as it is for HTLV-1 and adult T-cell leukemia/lymphoma or tropical spastic paraparesis/HTLV-1 associated myelopathy (TSP/HAM).
HTLV-2 is primarily transmitted through breastfeeding, sexual contact, and sharing of needles among injecting drug users. It is endemic in certain populations, particularly indigenous communities in the Americas, such as the Guaraní and Kayapó in Brazil, and the Navajo and Pima in the United States. Prevalence rates can reach up to 30% in some of these populations.
There is currently no vaccine or specific treatment for HTLV-2 infection, and prevention efforts focus on reducing transmission risks through education and harm reduction strategies.