Impaired translesion synthesis in xeroderma pigmentosum variant extracts. (1/1728)

Xeroderma pigmentosum variant (XPV) cells are characterized by a cellular defect in the ability to synthesize intact daughter DNA strands on damaged templates. Molecular mechanisms that facilitate replication fork progression on damaged DNA in normal cells are not well defined. In this study, we used single-stranded plasmid molecules containing a single N-2-acetylaminofluorene (AAF) adduct to analyze translesion synthesis (TLS) catalyzed by extracts of either normal or XPV primary skin fibroblasts. In one of the substrates, the single AAF adduct was located at the 3' end of a run of three guanines that was previously shown to induce deletion of one G by a slippage mechanism. Primer extension reactions performed by normal cellular extracts from four different individuals produced the same distinct pattern of TLS, with over 80% of the products resulting from the elongation of a slipped intermediate and the remaining 20% resulting from a nonslipped intermediate. In contrast, with cellular extracts from five different XPV patients, the TLS reaction was strongly reduced, yielding only low amounts of TLS via the nonslipped intermediate. With our second substrate, in which the AAF adduct was located at the first G in the run, thus preventing slippage from occurring, we confirmed that normal extracts were able to perform TLS 10-fold more efficiently than XPV extracts. These data demonstrate unequivocally that the defect in XPV cells resides in translesion synthesis independently of the slippage process.  (+info)

Mutations of oncoprotein 18/stathmin identify tubulin-directed regulatory activities distinct from tubulin association. (2/1728)

Oncoprotein 18/stathmin (Op18) is a recently identified phosphorylation-responsive regulator of the microtubule (MT) system. It was originally proposed that Op18 specifically regulates dynamic properties of MTs by associating with tubulin, but it has subsequently been proposed that Op18 acts simply by sequestering of tubulin heterodimers. We have dissected the mechanistic action of Op18 by generation of two distinct classes of mutants. One class has interruptions of the heptad repeats of a potential coiled-coil region of Op18, and the other involves substitution at all four phosphorylation sites with negatively charged Glu residues. Both types of mutation result in Op18 proteins with a limited decrease in tubulin complex formation. However, the MT-destabilizing activities of the coiled-coil mutants are more severely reduced in transfected leukemia cells than those of the Glu-substituted Op18 derivative, providing evidence for tubulin-directed regulatory activities distinct from tubulin complex formation. Analysis of Op18-mediated regulation of tubulin GTPase activity and taxol-promoted tubulin polymerization showed that while wild-type and Glu-substituted Op18 derivatives are active, the coiled-coil mutants are essentially inactive. This suggests that Op18-tubulin contact involves structural motifs that deliver a signal of regulatory importance to the MT system.  (+info)

Regulation of human hsp90alpha gene expression. (3/1728)

Mammalian HSP90alpha and HSP90beta are encoded by two individual genes. On the basis of the upstream sequences of the human hsp90alpha gene, GenBank accession number U25822, we have constructed CAT reporter plasmids driven by individual fragments of the hsp90alpha gene. We found that (1) the proximal heat shock element complex located at -96/-60 enhances hsp90alpha promoter expression; (2) heat shock induction depends upon the coexistence of distal heat shock element at -1031/-1022 and the proximal heat shock element complex of the hsp90alpha gene; (3) unlike hsp90beta, downstream sequences of the transcription start site inhibit hsp90alpha expression. We conclude that the regulatory mechanisms for the expression of hsp90alpha and hsp90beta genes are different.  (+info)

unr, a cellular cytoplasmic RNA-binding protein with five cold-shock domains, is required for internal initiation of translation of human rhinovirus RNA. (4/1728)

Initiation of translation of the animal picornavirus RNAs occurs via a mechanism of direct ribosome entry, which requires a segment of the 5' UTR of the RNA, known as the internal ribosome entry site (IRES). In addition, translation of the enterovirus and rhinovirus (HRV) subgroups requires cellular trans-acting factors that are absent from, or limiting in rabbit reticulocytes, but are more abundant in HeLa cell extracts. It has been shown previously that HeLa cells contain two separable activities, each of which independently stimulates HRV IRES-dependent translation when used to supplement reticulocyte lysate; one of these activities was identified as polypyrimidine tract-binding protein (PTB). Here, the purification of the second activity is achieved by use of an RNA-affinity column based on the HRV 5' UTR. It comprises two components: a 38-kD protein (p38), which is a novel member of the GH-WD repeat protein family and has no intrinsic RNA-binding activity; and a 96- to 97-kD protein doublet, which was identified as unr, an RNA-binding protein with five cold-shock domains. Coimmunoprecipitation with antibodies against either protein shows that the two proteins interact with each other, and thus p38 is named unrip (unr-interacting protein). Recombinant unr acts synergistically with recombinant PTB to stimulate translation dependent on the rhinovirus IRES. In contrast, unr did not significantly augment the PTB-dependent stimulation of poliovirus IRES activity.  (+info)

Fertilization, embryonic development, and offspring from mouse eggs injected with round spermatids combined with Ca2+ oscillation-inducing sperm factor. (5/1728)

Round spermatids, precursor male gametes, are known to possess the potential to achieve fertilization and embryonic development when injected into eggs. However, injection of spermatids alone seldom activates eggs in the mouse, as spermatids by themselves cannot induce an increase in intracellular Ca2+, a prerequisite for egg activation. We injected a mouse round spermatid into an egg simultaneously with partially purified sperm factor from differentiated hamster spermatozoa. The combined injection produced repetitive Ca2+ increases (Ca2+ oscillations) lasting for at least 4 h as observed at fertilization, and induced activation in 92% of eggs. This method provided 75% fertilization success associated with male and female pronucleus formation and development to 2-cell embryos, while only 7% of eggs were fertilized by injection of a spermatid alone. Of the 2-cell embryos, approximately 50% developed to blastocysts during 5 days of culture in vitro, while no blastocysts were obtained following injection of sperm factor alone. Furthermore, the 2-cell embryos, that were created by spermatids and sperm factor and transplanted into foster mothers, developed into normal offspring, although the percentage was only 22%. All infants grew into healthy adults carrying normal chromosomes. The sperm factor served as a complementary factor for successful fertilization by round spermatid injection.  (+info)

Discrete regional distributions suggest diverse functional roles of calcium channel alpha1 subunits in sperm. (6/1728)

The Ca channels of male germ-line cells are partially characterized, but the molecular properties and subcellular localization of the Ca channels of mature sperm are unknown. Here, we probe rodent sperm with anti-peptide antibodies directed to cytosolic domains of cloned rat brain alpha1A, alpha1C, and alpha1E Ca channel subunits. Each recognizes a 200- to 245-kDa band on immunoblots of whole rat sperm extracts. A smaller ( approximately 110-kDa) alpha1C band also is detected. Confocal fluorescence images of mouse sperm show characteristic patterns of punctate alpha1A-, alpha1C-, and alpha1E-immunoreactivity. For alpha1A, the puncta are larger, less numerous, and more variable in distribution than for alpha1C and alpha1E. They are absent from the acrosomal crescent, but are present elsewhere over the sperm head, often at the apical tip and equatorial segment. They also are found at irregular intervals along both the midpiece and the principal piece of the flagellum. For alpha1C and alpha1E, puncta are dense along dorsal and ventral aspects of the acrosomal cap. For alpha1E but not alpha1C, the remainder of the acrosomal region also is labeled. Neither is found in the postacrosomal region or on the midpiece. Puncta of alpha1C and alpha1E occur at regular intervals each in two parallel rows, at the dorsal and ventral aspects of the proximal segment of the flagellar principal piece. The puncta in these arrays become less abundant and intense in the distal flagellum. These results demonstrate that multiple Ca channel proteins are present in mature sperm and are regionally localized in ways that may give them different regulatory roles.  (+info)

Defective repair of cisplatin-induced DNA damage caused by reduced XPA protein in testicular germ cell tumours. (7/1728)

Metastatic cancer in adults usually has a fatal outcome. In contrast, advanced testicular germ cell tumours are cured in over 80% of patients using cisplatin-based combination chemotherapy [1]. An understanding of why these cells are sensitive to chemotherapeutic drugs is likely to have implications for the treatment of other types of cancer. Earlier measurements indicate that testis tumour cells are hypersensitive to cisplatin and have a low capacity to remove cisplatin-induced DNA damage from the genome [2] [3]. We have investigated the nucleotide excision repair (NER) capacity of extracts from the well-defined 833K and GCT27 human testis tumour cell lines. Both had a reduced ability to carry out the incision steps of NER in comparison with extracts from known repair-proficient cells. Immunoblotting revealed that the testis tumour cells had normal amounts of most NER proteins, but low levels of the xeroderma pigmentosum group A protein (XPA) and the ERCC1-XPF endonuclease complex. Addition of XPA specifically conferred full NER capacity on the testis tumour extracts. These results show that a low XPA level in the testis tumour cell lines is sufficient to explain their poor ability to remove cisplatin adducts from DNA and might be a major reason for the high cisplatin sensitivity of testis tumours. Targeted inhibition of XPA could sensitise other types of cells and tumours to cisplatin and broaden the usefulness of this chemotherapeutic agent.  (+info)

Bcl-2 regulates a caspase-3/caspase-2 apoptotic cascade in cytosolic extracts. (8/1728)

Apoptosis is accompanied by the activation of a number of apoptotic proteases (caspases) which selectively cleave specific cellular substrates. Caspases themselves are zymogens which are activated by proteolysis. It is widely believed that 'initiator' caspases are recruited to and activated within apoptotic signalling complexes, and then cleave and activate downstream 'effector' caspases. While activation of the effector caspase, caspase-3, has indeed been observed as distal to activation of several different initiator caspases, evidence for a further downstream proteolytic cascade is limited. In particular, there is little evidence that cellular levels of caspase-3 that are activated via one pathway are sufficient to cleave and activate other initiator caspases. To address this issue, the ability of caspase-3, activated upon addition to cytosolic extracts of cytochrome c, to cause cleavage of caspase-2 was investigated. It was demonstrated that cleavage of caspase-2 follows, and is dependent upon, activation of caspase-3. Moreover, the activation of both caspases was inhibited by Bcl-2. Together, these data indicate that Bcl-2 can protect cells from apoptosis by acting at a point downstream from release of mitochondrial cytochrome c, thereby preventing a caspase-3 dependent proteolytic cascade.  (+info)

Yeast extracts consist of the cell contents of yeast without the cell walls; they are used as food additives or flavorings, or ... Doing so may allow specific compounds to be extracted or to produce an extract without the hydrolysis of cell contents (as in ... switched from beef extract to yeast extract for 2005 and most of 2006, but later switched back. Yeast extract is used as a ... Yeast extracts in general are produced in three steps: fermentation (growing the yeast), disruption (breaking of the cells), ...
"Interaction of astringent grape seed procyanidins with oral epithelial cells". Food Chemistry. 115 (2): 551-557. doi:10.1016/j. ... Grape seed extract is an industrial derivative of whole grape seeds. The extract contains proanthocyanidins. Grape seed extract ... Grape seed extract is sold as a dietary supplement, but there is insufficient medical evidence it provides any effect on human ... Zhang H, Liu S, Li L, Liu S, Liu S, Mi J, Tian G (2016). "The impact of grape seed extract treatment on blood pressure changes ...
v t e (CS1 maint: archived copy as title, Cell culture media, All stub articles, Microbiology stubs). ... Buffered charcoal yeast extract (BCYE) agar is a selective growth medium used to culture or grow certain types of bacteria, ... This culture is to be differentiated from regular yeast extract agar, which is not selective. "Archived copy" (PDF). Archived ... "Laboratory diagnosis of Acanthamoeba keratitis using buffered charcoal-yeast extract agar". Am. J. Ophthalmol. 126 (4): 590-2. ...
The main chapters imported in 2012 were: coffee (75.3% of the total); juices and vegetable extracts (18.9%); nuts (3.5%); ... The main exported chapters consisted of: sounding devices (44.5% of the total); photovoltaic cells (20.4%); centrifugal pumps ( ...
Ning Y, Rao Y, Yu Z, Liang W, Li F (March 2016). "Skin permeation profile and anti-inflammatory effect of anemonin extracted ... and effects on Caco-2 cells by in vitro and in silico studies". Open Chemistry. 20 (1): 299-312. doi:10.1515/chem-2022-0137. ... Pirvu, Lucia; Stefaniu, Amalia; Neagu, Georgeta; Pintilie, Lucia (2022-01-01). "Studies on Anemone nemorosa L. extracts; ... ET-1 and ICAM-1 production in rat intestinal microvascular endothelial cells". Journal of Ethnopharmacology. 104 (3): 362-366. ...
The structure and properties of levan, a polymer of d-fructose produced by cultures and cell-free extracts of Aerobacter ... The structure and properties of levan, a polymer of d-fructose produced by cultures and cell-free extracts of Aerobacter ... 78:401-406, 1958 Xylosyl transfer by asparagus extracts. Feingold, D. S., Neufeld, E. F. and Hassid, W. Z. J. Biol. Chem. 234: ... Interferon production in mice by cell wall mutants of Salmonella typhimurium. Youngner, J. S. and Feingold, D. S. Virology 1: ...
Cell. 122 (3): 379-91. doi:10.1016/j.cell.2005.06.015. PMC 4401993. PMID 16096058. Glanzer J, Miyashiro KY, Sul JY, Barrett L, ... Jamison SF, Crow A, Garcia-Blanco MA (October 1992). "The spliceosome assembly pathway in mammalian extracts". Molecular and ... doi:10.1016/j.cell.2017.04.033. PMID 28502770. Schmucker D, Clemens JC, Shu H, Worby CA, Xiao J, Muda M, Dixon JE, Zipursky SL ... Zhang X, Yan C, Hang J, Finci LI, Lei J, Shi Y (May 2017). "An Atomic Structure of the Human Spliceosome". Cell. 169 (5): 918- ...
The company extracts cells from live animals. It cultures those cells in stainless steel fermenters, where they reproduce and ... Purdy, Chase (22 January 2020). "A startup says it's building a US pilot plant for cell-based meat". Quartz. Retrieved 27 May ... Future Meat Technologies, or Future Meat for short, is a biotechnology firm which produces cultured meat from chicken cells and ... Future Meat Technologies mainly seeks to supply hardware and cell lines to manufacturers of cultured meat rather than directly ...
A cell extract is obtained by lysing the cell of interest and centrifuging out the cell walls, DNA genome, and other debris. ... Common cell extracts in use today are made from E. coli (ECE), rabbit reticulocytes (RRL), wheat germ (WGE), insect cells (ICE ... Common components of a cell-free reaction include a cell extract, an energy source, a supply of amino acids, cofactors such as ... Most notably, a cell-free reaction, including extract preparation, usually takes 1 -2 days, whereas in vivo protein expression ...
Kornberg T, Gefter ML (1971). "Purification and DNA synthesis in cell-free extracts: properties of DNA polymerase II". Proc. ... Kornberg T, Gefter ML (10 September 1972). "Deoxyribonucleic acid synthesis in cell-free extracts. IV. Purification and ...
1 Preparation and properties of cell-free extracts". J. Biol. Chem. 240 (12): 4669-74. doi:10.1016/S0021-9258(18)97007-9. PMID ...
If applied to the skin, the extract sanguinarine may cause a massive scab of dead flesh where it killed the cells, called an ... Bloodroot extracts have also been promoted by some dietary supplement companies as a treatment or cure for cancer, but the U.S ... Sanguinarine kills animal cells by blocking the action of Na+/K+-ATPase transmembrane proteins. As a result, applying bloodroot ... Bloodroot and its extracts are thus considered escharotic. Although applying escharotic agents (including bloodroot) to the ...
"Methenyl-tetrahydromethanopterin cyclohydrolase in cell extracts of Methanobacterium". Arch. Biochem. Biophys. 242 (2): 430-9. ...
... extract against two types of herpes simplex viruses in cell culture. Die Pharmazie-An International Journal of Pharmaceutical ... Extracting seed from the fruit involves cleaning the flesh off by placing fruits in a macerator, blender, or by soaking the ... Rayne, S., & Mazza, G. (2007). Biological activities of extracts from sumac (Rhus spp.): a review. Nature Precedings, 1-1. ... ovata extract have been proven to have antibacterial properties that impede the growth of gram-positive bacteria like ...
Philpott A, Leno GH (May 1992). "Nucleoplasmin remodels sperm chromatin in Xenopus egg extracts". Cell. 69 (5): 759-767. doi: ... Seminars in Cell Biology. 1 (1): 11-17. PMID 1983266. Rice P, Garduño R, Itoh T, Katagiri C, Ausio J (June 1995). " ... Cell. 30 (2): 449-458. doi:10.1016/0092-8674(82)90242-2. PMID 6814762. Tejun S, Yaozhou Z (2007). "Nucleoplasmin, an Important ...
Cell. Biochem. 5 (1-2): 55-63. doi:10.1007/BF01874172. PMID 4279328. S2CID 26999163. Kalckar, H. M. Biological phosphorylations ... Kalckar, H. M. (1939). "The Nature of Phosphoric Esters Formed in Kidney Extracts". Biochemical Journal. 33 (5): 631-641. doi: ... which they purified from muscle extracts. Further work on nucleotide metabolism allowed him to identify nucleoside ...
The model has three basic predictions that should hold true in cycling oocyte extracts whose cell cycle progression is ... After the cell has split into its two daughter cells, the cell enters G1. DNA repair processes and cell cycle checkpoints have ... During this process, known as the cell cycle, a cell duplicates its contents and then divides in two. The purpose of the cell ... and the cell wall forms a septum which divides the cell into two. As the eukaryotic cell cycle is a complex process, eukaryotes ...
Hydrolysis of nucleic acids in crude cell-free extracts. Sequencing of RNA. Preparation of rabbit reticulocyte lysates. Studies ... A common source is E.coli cells carrying a cloned nuc gene encoding Staphylococcus aureus extracellular nuclease (micrococcal ...
Studies have shown that its extracts have renal effects. It has also been seen that in rats, such extracts cause an increase in ... The surface cells are loosely arranged. The number of chromosomes is 16, which is 2n = 8. It has been said that the species of ... "Effects of hydroalcoholic extracts of Portulaca pilosa and Achyrocline satureioides on urinary sodium and potassium excretion ...
"Toxic effects of Karenia mikimotoi extracts on mammalian cells". Chinese Journal of Oceanology and Limnology. 29 (4): 860-868. ...
The antigens are either from cell extracts or recombinant. Blood serum is incubated in the wells of the plate and is washed out ... T-cells and B-cells) and antigen presenting cells. These cells coordinate an immune response upon the detection of foreign ... the cell line was contaminated and displaced by HeLa cells, and has now been identified as actually HeLa cells. They are ... They are termed ENA because they can be extracted from the cell nucleus with saline. The ENAs consist of ribonucleoproteins and ...
One study showed that extracts of H. stigonocarpa suppressed cell division in onions, and this may imply that it contains some ... Fabaceae) on the cell cycle of Allium cepa L." Anais da Academia Brasileira de Ciências. 86 (3): 1147-1150. doi:10.1590/0001- ... Lacerda, Lourran P.; Malaquias, Geiz; Peron, Ana Paula (2014). "Antiproliferative action of aqueous extracts of Hymenaea ...
Research in the early 20th century focused on extracting crude extracts and reconciling some of the conflicting views on ... Sugawara, I (1982). "Polysaccharides with sulfate groups are human T-cell mitogens and murine polyclonal B-cell activators ( ... Methods of extracts and isolation of fucoidan from brown seaweeds were determined on laboratory scale by Black et al. at the ... Some extracts are consumed via energy drinks or within vitamin-enriched powdered supplement packets that are mixed into water. ...
Knysh O, Martynov A (2020). "Lactobacillus reuteri cell-free extracts against antibiotic-resistant bacteria". Zaporozhye ... Cell. 165 (7): 1762-1775. doi:10.1016/j.cell.2016.06.001. PMC 5102250. PMID 27315483. Wang XD, Soltesz V, Molin G, Andersson R ...
Fermentation is another process by which cells can extract energy from glucose. It is not a form of cellular respiration, but ... This phenomenon is called the Warburg effect and is found primarily in cancer cells. Muscles cells under great exertion will ... Generally, lactic acid fermentation occurs only when aerobic cells are lacking oxygen. However, some aerobic mammalian cells ... CO2 is excreted from the cell via diffusion into the blood stream, where it is transported in three ways: Up to 7% is dissolved ...
... is typically extracted by ethanol precipitation from liquid culture or by alkaline treatment from the cell wall. Once extracted ... Cell Microbiol 12, 405-410 Robinet, P., Baychelier, F., Fontaine, T., Picard, C., Debre, P., Vieillard, V., Latge, J.P., and ... Bardalaye, P.C., and Nordin, J.H. (1976). Galactosaminogalactan from cell walls of Aspergillus niger. J Bacteriol 125, 655-669 ... Similar to other fungal cell wall polysaccharides, galactosaminogalactan is synthesized by polymerization of nucleotide sugars ...
It is extracted from bovine thymus. Prior to 1960, the thymus gland, which lies in the cervical thoracic area, was thought to ... To attack tumor cells and viruses, CD-4 cells coordinate the overall immune response and help activate CD8 T-lymphocytes. Often ... This protein came to be known as lymphocyte T-cell immunomodulator. Lymphocyte T-cell immunomodulator, or T-4 immune ... CD-8+ T-lymphocytes they respond to intracellular pathogens and cancer cells. Under viral attack CD-4+ T-cells fail to mature, ...
Cell. 132 (4): 583-597. doi:10.1016/j.cell.2008.02.007. PMID 18295577. Cohen, A. R. (3 November 2014). "Extracting meaning from ... In cell biology, single-cell variability occurs when individual cells in an otherwise similar population differ in shape, size ... Similar to variation in the metabolome, the proteins present in a cell and their abundances can vary from cell to cell in an ... but they are designed to use DNA from a population of cells rather than a single cell. The primary challenge for single-cell ...
Through experiments in Xenopus laevis cell-free egg extracts, such model was confirmed as the basis for entry into mitosis. ... Cells with a defective G2-M checkpoint will undergo apoptosis or death after cell division if they enter the M phase before ... September 2002). "Hysteresis drives cell-cycle transitions in Xenopus laevis egg extracts". Proceedings of the National Academy ... The G2-M DNA damage checkpoint is an important cell cycle checkpoint in eukaryotic organisms that ensures that cells don't ...
Mechanism of action: A monoclonal antibody against HER2/neu (erb-B2). Helps kill breast cancer cells that overexpress HER-2, ... Extracts from some medicinal mushrooms are natural biological response modifiers. Immunotherapy "Biological Response Modifiers ... where targeted therapy often relies on the immune system being used to attack cancer cells) and in treating autoimmune diseases ... "Persistence of Autoreactive IgA-Secreting B Cells Despite Multiple Immunosuppressive Medications Including Rituximab". JAMA ...

No FAQ available that match "cell extracts"

No images available that match "cell extracts"