Thus, stress response studies during these growth stages reveal novel differentially regulated genes or proteins with important functions in plant stress adaptation. (intechopen.com)
So CCDS's gene number prediction represents a lower bound on the total number of human protein-coding genes. (wikipedia.org)
Transcription factors (TFs) are proteins that bind to specific DNA sequences of their target genes to regulate gene transcription and thus play an essential role in modulating growth, development, and stress tolerance (Lambert et al. (biomedcentral.com)
2018 ). The apple bZIP protein MdHY5 regulates the transcription of MdMYB10 and anthocyanin biosynthesis genes, promoting the expression of nitrate reductase genes and nitrate uptake genes and thereby playing essential roles in anthocyanin accumulation and nitrate assimilation (An et al. (biomedcentral.com)
2013 ). Under H 2 O 2 stress conditions, fission yeast increases the expression levels of bZIP TF genes ATF1 and PCR1 to successfully adapt to oxidative stress (Fernández-Vázquez et al. (biomedcentral.com)
Furthermore, gene-gene and gene-metabolite network analyses discovered that the light-responsive expression of genes encoding bHLH, MYB, WRKY, NAC, and MADS-box transcription factors, and proteins involved in genetic information processing and epigenetic regulation such as nucleosome assembly and histone acetylation, showed a high positive correlation with grape berry phenolic accumulation in response to different light regimes. (biomedcentral.com)
When exposure to stress, the plant WRKY protein specifically binds to the W-box cis -element in the conserved region of the related gene promoter, thereby achieves self-regulation or cross regulation, then activates or inhibits the transcriptional expression of downstream genes in response to various stress conditions. (plantnutrifert.org)
Transcriptional2
In Aspergillus fumigatus , iron starvation causes extensive transcriptional remodeling involving two central transcription factors, which are interconnected in a negative transcriptional feed-back loop: the GATA-factor SreA and the bZip-factor HapX. (frontiersin.org)
WRKY proteins are a group of important transcriptional regulators that are unique to plants. (plantnutrifert.org)
Aspergillus4
Overexpression of RsmA , a bZIP TF-coding gene in Aspergillus nidulans , significantly increases secondary metabolite production and confers resistance against predation. (biomedcentral.com)
in the filamentous fungus aspergillus nidulans, however, little is known about the molecular genetic mechanisms of vacuolar biogenesis and function. (liverpool.ac.uk)
functional characterization of nat/ncs2 proteins of aspergillus brasiliensis reveals a genuine xanthine-uric acid transporter and an intrinsically misfolded polypeptide. (liverpool.ac.uk)
the filamentous fungus aspergillus oryzae is a well-known expression host used to express homologous and heterologous proteins in a number of industrial applications. (liverpool.ac.uk)
Mitochondria4
The mitochondria have their own chaperones and proteolytic enzymes that remove damaged or unfolded proteins [ 18 - 20 ]. (hindawi.com)
reveal how the PPR-E proteins function in RNA editing in maize mitochondria. (plantae.org)
We identified bZIP and coiled-coil domain-containing PPR 1 (bCCP1) and an atypical PPR-DYW protein, PCW1, which are required for the C-to-U editing at 66 sites and 102 sites in maize ( Zea mays ) mitochondria, respectively. (plantae.org)
Maize PPR-E proteins mediate RNA C-to-U editing in mitochondria by recruiting the trans deaminase PCW1. (plantae.org)
Fungal1
2007) Mnh6, a nonhistone protein, is required for fungal development and pathogenicity of Magnaporthe grisea. (prelekara.sk)
WRKY1
4) revealing the proteins that interact with WRKY and the underlying mechanisms under nutrient deficiency. (plantnutrifert.org)
Morphology1
2010) A novel protein Com1 is required for normal conidium morphology and full virulence in Magnaporthe oryzae. (prelekara.sk)
Encodes2
Encodes a protein with nicotianamine synthase activity. (or.jp)
Encodes a zinc finger protein containing only a single zinc finger. (or.jp)
Interact1
Furthermore, protein interaction analyses show that bCCP1, PCW1, and the multiple organellar RNA editing factor (MORF) proteins ZmMORF1/8 interact with each other, and the PPR-E protein Empty pericarp7 interacts with bCCP1 and ZmMORF1/8. (plantae.org)
Therefore, we aimed to analyze the biological roles of UvbZIP6 , a member of the bZIP family in U. virens . (biomedcentral.com)
Sequence3
Download DNA or protein sequence, view genomic context and coordinates. (yeastgenome.org)
Basic sequence-derived (length, molecular weight, isoelectric point) and experimentally-determined (median abundance, median absolute deviation) protein information. (yeastgenome.org)
Click "Protein Details" for further information about the protein such as half-life, abundance, domains, domains shared with other proteins, protein sequence retrieval for various strains, physico-chemical properties, protein modification sites, and external identifiers for the protein. (yeastgenome.org)
Responses1
Numerous bZIP proteins have been identified in filamentous fungi and oomycetes, a few of which are involved in the development, nutrient utilization, and stress responses. (biomedcentral.com)
Accumulation1
Ageing leads to a gradual dysfunction of the proteostasis network and thus to proteome instability due to accumulation of damaged and/or misfolded proteins [ 2 ]. (hindawi.com)
Molecular2
These strategies involve rearrangements at the molecular level starting from transcription, regulation of mRNA processing, translation, and protein modification or its turnover. (intechopen.com)
The proteostasis network (PN) is an assembly of distinct dynamic molecular pathways that control the functionality of the proteome (proteome homeodynamics) during protein synthesis, folding, trafficking, and degradation. (hindawi.com)
Recently, the sterol regulatory element binding protein SrbA was found to be essential for adaptation to iron starvation, thereby linking regulation of iron metabolism, ergosterol biosynthesis, azole drug resistance, and hypoxia adaptation. (frontiersin.org)
Plants1
In plants, bZIP proteins play a variety of functions, including the development of seeds and flowers, hormone synthesis and signal transduction, and response to abiotic and biotic stresses. (biomedcentral.com)
DOMAIN1
The DYW domain in PPR-DYW proteins provides the cytidine deaminase activity for RNA C-to-U editing and PPR-E+ proteins recruit an atypical PPR-DYW protein to function in RNA editing. (plantae.org)
Levels1
Circulating cytokines levels were evaluated by protein array. (bvsalud.org)
Role2
2018 ). The endoplasmic reticulum (ER) membrane-associated TF OsbZIP74 in rice plays an essential role in unfolding proteins induced by heat stress (Lu et al. (biomedcentral.com)
What is the role of the non-PPR proteins in the editosome? (plantae.org)
Target1
Thus, we propose a model for PPR-E protein function in RNA editing in which the PPR-E protein recognizes the target site and recruits the trans cytidine deaminase PCW1 with the assistance of bCCP1 and MORFs. (plantae.org)
Repeat1
PLS-class pentatricopeptide repeat (PPR) proteins are divided into three subclasses, PPR-E, PPR-E+, and PPR-DYW, and function as critical factors in C-to-U editing of RNAs. (plantae.org)
Domains1
The PPR-E proteins lack the E+ and DYW domains but function in RNA editing. (plantae.org)
Surprisingly, the 66 editing sites overlap entirely with the 102 editing sites and are solely associated with known PPR-E class proteins. (plantae.org)