Gene Expression RegulationGene Expression ProfilingGene Expression Regulation, PlantOligonucleotide Array Sequence AnalysisMicroRNAsGene Expression Regulation, DevelopmentalTranscription, GeneticPromoter Regions, GeneticRNA, MessengerGene ExpressionTranscription FactorsBase SequenceRNA, UntranslatedMolecular Sequence DataComputational BiologyChromatinGenomeGene Expression Regulation, NeoplasticBinding SitesModels, GeneticGene Expression Regulation, FungalGene Expression Regulation, ArchaealAlgorithmsReverse Transcriptase Polymerase Chain ReactionNucleic Acid ConformationSignal TransductionDNA-Binding ProteinsCell LineTranscriptomeGene Regulatory NetworksCell Line, TumorDown-RegulationGene Expression Regulation, EnzymologicUp-RegulationRNA StabilityCells, Cultured3' Untranslated RegionsGene Expression Regulation, BacterialSequence Analysis, RNAGene Expression Regulation, ViralEpigenesis, GeneticHistonesModels, BiologicalAlternative SplicingEvolution, Molecular5' Untranslated RegionsTranscriptional ActivationArabidopsisRepressor ProteinsDNA MethylationAmino Acid SequenceConserved SequenceGene Expression Regulation, LeukemicTrans-ActivatorsGenes, ReporterSequence Analysis, DNAChromatin ImmunoprecipitationNuclear ProteinsSoftwareHomeodomain ProteinsTransfectionMutationProtein BindingCell DifferentiationCluster AnalysisDNA PrimersResponse ElementsMicroarray AnalysisRNA InterferenceIn Situ HybridizationBlotting, NorthernMice, Inbred C57BLLuciferasesReal-Time Polymerase Chain ReactionRNA, Small InterferingPhenotypePolymerase Chain ReactionDrosophila ProteinsDNAGene SilencingBlotting, WesternRNACell NucleusCell ProliferationBasic Helix-Loop-Helix Transcription FactorsDNA, ComplementaryTumor Cells, CulturedTime FactorsLiverMice, KnockoutMice, TransgenicApoptosisPlasmidsReceptors, Cytoplasmic and NuclearOrgan SpecificityDrosophilaEnhancer Elements, GeneticHeLa CellsNF-kappa BRecombinant Fusion Proteins