Species microsatellite. Medical search. Frequent questions

The high variability of these markers makes them suitable to investigate the structure of genetic diversity in this important food tree species from Central Africa. (cgiar.org)
This set of newly developed microsatellite markers will be useful for assessing the genetic diversity and differentiation as well as gene flow patterns of D. edulis in tropical forests from Central Africa. (cgiar.org)
Development of microsatellite markers for Antarctic Bryum Hedw. (waikato.ac.nz)
The objective of this thesis was to isolate microsatellite markers using the Glenn (2001) method from the species Bryum argenteum so as to be able to study these markers in Antarctic populations of Bryum species. (waikato.ac.nz)
Microsatellite regions have been found to be highly polymorphic and neutral markers, and usually genus specific, thus making them ideal for population genetic studies. (waikato.ac.nz)
To study the population genetics of Antarctic Bryum species, development of microsatellite markers was necessary as it has been found that with less specific methods such as RAPD-PCR, the DNA used for the analyses had been contaminated by co-extracted DNA from fungi living on the mosses, thus confounding the results obtained. (waikato.ac.nz)
Microsatellites, once developed, are genus or family specific, thus there is little risk of amplifying a contaminant when using microsatellite markers. (waikato.ac.nz)
Microsatellite markers: valuable in Vaccinium L. (usda.gov)
Microsatellite markers: valuable in Vaccinium L.. International Journal of Fruit Science. (usda.gov)
Microsatellite markers can also be used for other genetic studies. (usda.gov)
populating blueberry genetic maps;and supplying a source of useful markers in 22 different species of in blueberry and related fruit crops. (usda.gov)
microsatellite markers are available for the species (Bro wn et al. (researchgate.net)
Microsatellite DNA sequences are rapidly becoming the dominant source of nuclear genetic markers for a wide range of applications, from genome mapping to forensic testing to population studies. (anthropogeny.org)
In this study, we screened the genome of G. brevipalpis to search for suitable microsatellite markers and nine were found to be efficient enough to distinguish between different tsetse populations. (geneconvenevi.org)
In this study, we developed microsatellite markers for nine endangered amphibian species endemic to Ryukyu Islands in Japan. (nii.ac.jp)
By using these markers, fine scale population structures and genetic diversities of these species were revealed. (nii.ac.jp)
Population genetic diversity and species relationships in the genus Rhinanthus L. based on microsatellite markers, 495-502. (usd.edu)
We used computer simulations to quantify bias and precision of the one-sample LDNe estimator of N b in age-structured populations using a range of published species life history types, sample sizes, and DNA markers. (usgs.gov)
This field of genetics emerged from the availability of several studies with classical molecular markers, such as isozymes, RAPD, AFLP, and microsatellites. (intechopen.com)
Such ancestry informative markers (AIMs), have rarely been developed for endangered species such as tigers utilizing single nucleotide polymorphisms (SNPs). (nature.com)
2000 ). Traditionally, upon the advent of Polymerase Chain Reaction (PCR) technology, genetic variation within wild populations used to be determined either employing a handful of neutral microsatellite markers or assessing mitochondrial DNA sequences (Chapman et al. (nature.com)
In genetic diversity studies, the most frequently used markers are microsatellites. (intechopen.com)
Population genetic analysis, using a panel of microsatellite markers, revealed that there was little genetic differentiation among the parasite populations with no significant difference in the overall genetic diversity between government and pastoral herds. (biomedcentral.com)
The aim of this Master thesis was to study the genetic diversity of alfalfa grown in Kyrgyzstan and in other countries and determine the genetic relationship using simple sequence repeat (SSR, microsatellite) molecular markers as well as to contribute to the development of synthetic alfalfa varieties for use as forage in Kyrgyzstan. (slu.se)
International Symposium on Molecular Markers in Horticultural Species. (missouri.edu)
We used next generation sequencing (Roche 454 pyrosequencing) to identify microsatellite markers from the genomic DNA of M. gilvus. (eurekamag.com)
This study also has effectively demonstrated the use of 454 pyrosequencing for the rapid development of informative microsatellite markers from a termite genome. (eurekamag.com)
Paternity identification, based on microsatellite molecular markers, established that the progeny produced in year 2 by females mated only in year 1, were often fathered by more than one male. (who.int)
Isolation and characterization of nine microsatellite markers for Brachypodium sylvaticum (Huds. (bvsalud.org)

All nine primers were tested for cross-amplification in species from the Fabaceae-Mimosoidea family, yielding a transferability success rate of 7 loci in Stryphnodendron adstringens to 0 transferred loci in Pithecellobium incuriale and Inga marginata . (geneticsmr.com)
Microsatellite primers for the narrowly endemic shrub Eriognoum giganteum (Polygoncaeae), 352-355. (usd.edu)
We have developed primers for nine polymorphic microsatellite loci to allow examination of intraspecific population subdivision associated with two aspects of the biology of their hosts: host species (oak gallwasps) and the tree on which the gallwasp develops (different oak species). (ed.ac.uk)

From a genomic library obtained by next-generation sequencing, 21 new polymorphic microsatellite loci were developed. (cgiar.org)

The availability of these novel microsatellite loci will help to better understand the population biology of G. brevipalpis and to assess the level of gene flow between different populations. (geneconvenevi.org)
In order to examine levels of connectivity among Gunnison Sage-grouse leks, we identified 13 novel microsatellite loci though next-generation shotgun sequencing, and tested them on the closely related Greater Sage-grouse. (usgs.gov)

The study of microsatellite length polymorphism in populations will allow these hypotheses to be tested. (waikato.ac.nz)
Data -- Beyond isolation by distance: what best explains functional connectivity among populations of three sympatric plant species in an ancient terrestrial island system? (datadryad.org)
Microsatellites are commonly used to identify population structure and assess dispersal of the target populations and have been developed for several tsetse species but were lacking for Glossina brevipalpis. (geneconvenevi.org)
Microsatellites are currently the most practical and informative molecular maker for measuring genetic variation within populations. (nii.ac.jp)
Nous avons développé des expertises en biologie et génétique des populations. (uclouvain.be)
Le taux d'allogamie peut être estimé en populations naturelles en utilisant des marqueurs co-dominants (microsatellites). (uclouvain.be)
Nous suivons en parallèle la génétique des populations végétales: structure et diversité y compris à l'échelle du clone- individu, flux de gènes, tests de paternité. (uclouvain.be)
The bias (high or low) was similar for different life history types within a species suggesting that life history variation in populations will not influence N b estimation. (usgs.gov)
This chapter outlines basic concepts in landscape genetics, the main statistical methods used so far, and the perspectives of this field of knowledge into strategies for conservation of natural populations of plant and animal species. (intechopen.com)
During the spread of livestock species across Europe, Asia, and Africa, numerous geographically separate populations of livestock species emerged, where each of these populations is expected to have adapted to their respective environment. (scirp.org)
Traditionally, most conservation efforts have been directed towards the preservation of isolated populations at the margin of their species distributions. (lu.se)
However, my research also shows that much diversity may be hidden within species and that populations of widespread species may be as important targets for conservation as named taxa. (lu.se)

Future research should be focussed on completion of microsatellite isolation for this genus and on evaluation of the population relationships among Antarctic localities. (waikato.ac.nz)
By ecomorphotype, we refer to differing phenotypic or physical characteristics within the same species, caused by genetic isolation in discrete habitats. (awionline.org)
Isolation of microsatellite loci from endangered members of Lotus (Fabaceae) subgenus Syrmatium. (usd.edu)
Isolation of microsatellite loci from Rhamnus pirifolia, 471-474. (usd.edu)
Isolation of microsatellite loci from the endangered plant Galium catalinense subspecies acrispum (Rubiaceae). (usd.edu)
Isolation of microsatellite loci from the endangered plant Sibara filifolia (Brassicaceae). (usd.edu)

2020 ) have analyzed whole-genome sequencing data of birds for studying the genomic features across a phylogeny without reference genomes albeit they had to use reference genomes from phylogenetically related species. (nature.com)

Microsatellites were designed and characterized in the African fruit tree species Dacryodes edulis (Burseraceae). (cgiar.org)

This can be achieved by designing oligonucleotide probes that hybridize with the repeats in the microsatellites and then pull out the probe/microsatellite complexes from the solution. (wikipedia.org)
Microsatellites were observed only in euchromatin regions, whereas the (TTAGG) 6 repeats were found at telomeric sites in both groups. (karger.com)

abstract = "We isolated and characterized 29 microsatellite loci for the bumphead parrotfish, Bolbometopon muricatum, a wide-ranging parrotfish listed as vulnerable by the International Union for Conservation of Nature (IUCN). (edu.sa)
abstract = "Eurytoma brunniventris is a parasitic wasp with a wide range of host species. (ed.ac.uk)

We also tested each locus for amplification and polymorphism on 11 other scarine labrid species and one labrid species. (edu.sa)

Several methods have been described by different patients who reported contact with farm animals and research groups to investigate intraspecies variation with- individual C. parvum microsatellite alleles. (cdc.gov)
We characterized eight microsatellite loci for K. pygmaea , which gave a maximum of four alleles per individual. (ufz.de)

Stingless bees of the genus Melipona are subdivided into 4 subgenera called Eomelipona , Melikerria , Melipona sensu stricto, and Michmelia according to species morphology. (karger.com)
Cytogenetically, the species of the genus Melipona show variation in the amount and distribution of heterochromatin along their chromosomes and can be separated into 2 groups: the first with low content of heterochromatin and the second with high content of heterochromatin. (karger.com)
Studies about nuclear DNA content in the genus Genypterus are scarce, and the present study gives the first estimate of nuclear DNA content of Genypterus chilensis, with a value of 2C= 1.0 + 0.06 pg, value close to that obtained for other Ophidiidae species wich range between 1.2 and 1.68 pg. (scielo.cl)

Microsatellite enrichment is a method in molecular biology used for enriching the amount of microsatellite sequences in a DNA sample. (wikipedia.org)
If misinterpretation is to be avoided, it is vital that we understand fully the way in which microsatellite sequences evolve. (anthropogeny.org)
The length of these repeating sequences , at one time dismissed as mere junk DNA, in the gene that codes for a key hormone receptor determined male-female relations and parenting behaviors in a species of voles. (news-medical.net)
Hammock and Young were particularly intrigued with microsatellites, repeating sequences of letters in the genetic code peppered throughout these regulatory areas of the vasopressin receptor gene. (news-medical.net)
for example, the repeating letter sequences are much longer in monogamous than in polygamous vole species, and even within a species, there are differences in the number of letters in the sequence among individuals. (news-medical.net)
Our study can be used as a guideline for developing an AIMs panel for the management of other endangered species where obtaining whole genome sequences are difficult. (nature.com)
All of the data suggest that the primary division within A. darlingi corresponds to two white gene genotypes between Amazonia (genotype 1) and Central America, parts of Colombia and Venezuela (genotype 2), and are in agreement with previously published mitochondrial COI gene sequences interpreted as incipient species. (nih.gov)

All nine loci amplified well across individuals collected from a range of gallwasp species and across two oak taxa. (ed.ac.uk)
Cross taxa amplification was successful across a panel of four related termite species and four multiplex groups were designed for future population genetic studies. (eurekamag.com)
However, much material without names had accumulated in botanical museums with time and I decribed several species and taxa at lower rank that were new to science. (lu.se)

We have therefore compared allele length distributions for 42 microsatellites in humans with their homologues in a range of related primates. (anthropogeny.org)

These microsatellites will be valuable to study population genetics of this and other species where primer transferability was detected. (geneticsmr.com)
While these microsatellites were designed for Gunnison Sage-grouse, they also work well for Greater Sage-grouse and could be used for numerous genetic questions including landscape and population genetics. (usgs.gov)

Amplification success ranged from zero to ten loci per species. (edu.sa)
Cross-species amplification was tested in 26 congeneric species and, on average, six of eight loci amplified successfully. (ufz.de)

Microsatellite marker-based genetic diversity analysis and developing synthetic varieties in Alfalfa (Medicago sativa L. (slu.se)

Location: Low altitude mountain ranges south-western Australia Methods: We analysed spatial patterns of genetic differentiation at nuclear microsatellite loci using Bayesian clustering. (datadryad.org)

We assessed population genetic structure and levels of differentiation based on 1,376 samples from 31 localities throughout the Peruvian and Brazilian Amazon and Central America using 5-8 microsatellite loci. (nih.gov)

Microsatellite evolution--evidence for directionality and variation in rate between species. (anthropogeny.org)
These insights call for a stronger focus on within-species variation patterns and possibly on species that are common in our area, but that are rare in other parts of Europe. (lu.se)

Assessing the population genetic structure of wild species is important for their management (Wultsch et al. (nature.com)

Microsatellite and phenological descriptors identify eastern black walnut cultivars in Missouri, USA. (missouri.edu)

The transferability of microsatellites was effective for four other Dacryodes species (D. buettneri, D. igaganga, D. osika, D. pubescens). (cgiar.org)

We tested whether a combination of chromosome counting, microsatellite analyses and flow cytometric measurements represents a suitable approach for the detection of basic chromosome numbers and ploidy in Kobresia (Cyperaceae). (ufz.de)
The combination of chromosome counts and microsatellite analyses is an ideal method for the determination of basic chromosome numbers and for inferring ploidy, and flow cytometry is a suitable tool for the identification of deviating cytotypes. (ufz.de)
In a recent survey on cytogenetic studies of Chilean fishes, 27 species were registered with data on chromosome number, karyotype morphology and/or nuclear DNA content (García 2010). (scielo.cl)

Invasive bark beetles (Coleoptera, Curculionidae, Scolytinae) in Chile and Argentina, including two species new for South America, and the correct identity of the orthotomicus species in Chile and Argentina. (uib.no)

Ongoing invasions of old-growth tropical forests: establishment of three incestuous beetle species in southern Central America (Curculionidae : Scolytinae). (uib.no)

Accurately inferring population genetic structure requires whole-genome data across the geographical range of the species, which can be resource-intensive. (nature.com)

We determined the complete mitochondrial DNA (mtDNA) sequence of this species and designed a primer set to amplify a highly variable region of mtDNA, part of the control region (CR), based on this complete sequence. (cambridge.org)

For example, identifying the genetic basis for flood tolerance among a range of hard mast producing tree species can provide significant environmental benefits for the establishment of new riparian buffers. (missouri.edu)

N b estimates were biased by ~5%-10% when using SNPs or microsatellites in species ranging from fishes to mosquitoes, frogs, and seaweed. (usgs.gov)

Even though their distributions are largely disjunct, it has been suggested the two species may hybridize to form P. edulis var. (bioone.org)
Globally distributed Xyleborus species reveal recurrent intercontinental dispersal in a landscape of ancient worldwide distributions Phylogenetics and phylogeography. (uib.no)

We find a highly significant trend for the loci to be longer in humans, showing that microsatellites can evolve directionally and at different rates in closely related species. (anthropogeny.org)
In the study described here, we investigated the commonly identified species that cause disease (cryp- subtypes of C. parvum and C. hominis and tested the asso- tosporidiosis) in humans ( 1 , 2 ). (cdc.gov)
The Emory researchers have found that the bonobo, an ape noted for its empathic traits, unlike its relative the chimpanzee, has a microsatellite with a sequence similar to that of humans. (news-medical.net)

The study of Low-frequency Microsatellite Instability has been mentioned in research publications which can be found using our bioinformatics tool below. (novusbio.com)
These pathways complement our catalog of research reagents for the study of Low-frequency Microsatellite Instability including antibodies and ELISA kits against MLH1, SIL1, MSH2, MSI, MSH6. (novusbio.com)
We have 3153 products for the study of Low-frequency Microsatellite Instability that can be applied to Chromatin Immunoprecipitation (ChIP), Flow Cytometry, Immunocytochemistry/Immunofluorescence, Immunohistochemistry, Western Blot from our catalog of antibodies and ELISA kits. (novusbio.com)
Cambronero_etal_microsatellite_genotyping: microsatellite genotyping results for the genotypes used in the study obtained from 13 microsatellite loci arranged in two multiplexes. (datadryad.org)
These microsatellite loci are potentially of value in the study of closely related economic pests such as seed predators of: almonds (E. amygdali) and pistachios (E. plotnikovi). (ed.ac.uk)

Fortunel Claire, Stahl C., Heuret P., Nicolini E., Baraloto C. - Disentangling the effects of environment and ontogeny on tree functional dimensions for congeneric species in tropical forests . (ird.fr)

Are wild horses truly "wild," as an indigenous species in North America, or are they "feral weeds"-barnyard escapees, far removed genetically from their prehistoric ancestors? (awionline.org)
The fungus-growing termite, Macrotermes gilvus (Hagen), an indigenous species from Southeast Asia distributed from Myanmar to Indonesia and the Philippines, offers great potential as an ecological model system to elucidate the effects of geography on gene flow within this region. (eurekamag.com)

The second surface is habitat suitability based on species distribution modelling (SDM), which tests whether genetic similarity is a function of connected and suitable habitat. (datadryad.org)

Then they bred two strains of a monogamous species, the prairie vole, one with a long version of the microsatellites and the other with a short version. (news-medical.net)

Biological factors contributing to bark and ambrosia beetle species diversification. (uib.no)

After PCR-RFLP analysis, unusual species and equiv- tions. (cdc.gov)
NTsys is a program to calculate various comparisions between taxonomic data, e.g. microsatellite DNA analysis (MSDA) data. (lu.se)

Los estudios sobre contenido de ADN nuclear en el género Genypterus son escasos, y el presente trabajo entrega por primera vez la estimación del contenido de ADN nuclear de Genypterus chilensis con un valor 2C = 1,0 + 0,06 pg, valor cercano al descrito para otras especies de Ophidiidae que varían entre 1,2 y 1,68 pg. (scielo.cl)

In general, Melipona species have 2n = 18 chromosomes, and the species of each subgenus share the same characteristics in relation to heterochromatin regions, DAPI/CMA 3 fluorophores, and the number and distribution of 18S rDNA sites. (karger.com)
Cultivated alfalfa (Medicago sativa L.) is an allogamous autotetraploid species with 2n = 4x = 32 chromosomes. (slu.se)

Precision was higher for 100 SNPs (H ≈ 0.30) than for 15 microsatellites (H ≈ 0.70). (usgs.gov)

These results suggest that there is no fragmental population of Hodgson's Hawk-eagle in Japan and that this species has dispersed within short distances, at least in some lineages. (cambridge.org)

Critics of the idea that the North American wild horse is a native animal, using only selected paleontological data, assert that the species, E. caballus (or the caballoid horse), which was introduced in 1519, was a different species from that which disappeared between 13,000-11,000 years before. (awionline.org)

Using climate-driven adaptive evolution to guide seed sourcing for restoration in a diverse North American herb-shrub species. (usda.gov)

Genetic diversity of represents the evolutionary history of species and the essential evolutionary potential to respond to changing environments especially for endangered species. (nii.ac.jp)
This number of studied species represents ca. 2.7% of the fish Chilean diversity. (scielo.cl)

The fruits are commercialized throughout Central Africa and the species is present in forested environments as well as cultivated systems. (cgiar.org)

These microsatellite loci are the first specific set for B. muricatum and will be a useful tool for assessing genetic population structure, genetic diversity, and parentage in future studies. (edu.sa)

Anatomy22

Organisms20

Diseases16

Chemicals and Drugs19

Analytical, Diagnostic and Therapeutic Techniques and Equipment23

Psychiatry and Psychology1

Phenomena and Processes97

Disciplines and Occupations4

Anthropology, Education, Sociology and Social Phenomena3

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Geographicals7

Markers29

Primers3

Polymorphic1

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Isolation6

Genomic1

Designed and characterized1

Repeats2

Abstract2

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Sequences7

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Allele1

Genetics2

Amplification2

Marker1

Genetic differentiation1

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Wild species1

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Chromosome3

South America1

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Study5

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