Protein ConformationComputer SimulationProtein BindingModels, MolecularProtein Interaction MappingMolecular Sequence DataBinding SitesProtein Structure, TertiaryAmino Acid SequenceMolecular Dynamics SimulationTwo-Hybrid System TechniquesMolecular ConformationProtein Structure, SecondaryThermodynamicsProtein FoldingCircular DichroismCrystallography, X-RayBase SequenceDeuterium Exchange MeasurementTranscription FactorsHydrogen BondingModels, ChemicalProteinsCell LineKineticsSpectrometry, FluorescenceMagnetic Resonance SpectroscopyProtein DenaturationSolutionsOptical Rotatory DispersionTemperatureWaterAlgorithmsHydrogen-Ion ConcentrationSilica GelModels, BiologicalMyoglobinMutationMonte Carlo MethodLigandsStructure-Activity RelationshipStatic ElectricitySolventsBiophysicsNuclear Magnetic Resonance, BiomolecularTryptophanProtein Structure, QuaternaryPeptidesProtein StabilitySpectrum Analysis, RamanBiophysical PhenomenaMutagenesis, Site-DirectedSpectroscopy, Fourier Transform InfraredMolecular StructureRecombinant ProteinsEscherichia coliAnilino NaphthalenesulfonatesHydrophobic and Hydrophilic InteractionsPatient SimulationAmino Acid SubstitutionMuramidaseApoproteinsHydrogenSpectrophotometry, InfraredPrionsBacteriorhodopsinsBacterial ProteinsGuanidineSoftwareCatalysisAmyloidSpectrophotometry, UltravioletSchiff BasesProtonsModels, TheoreticalDimerizationMolecular Docking SimulationDNAPeptide FragmentsEnergy TransferIonsDeuteriumCrystallizationCattleModels, StatisticalSpectrum AnalysisMacromolecular SubstancesHorsesPhotochemistrySubstrate SpecificityFluorescence Resonance Energy TransferComputational BiologyHot TemperatureChemistry, PhysicalMass SpectrometryHydrostatic PressureHydrolysisEnzyme StabilityOxidation-ReductionLipid Bilayers