gacA-L , group A carbohydrate biosynthetic genes (putative functions described in van Sorge et al. (cdc.gov)
Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase. (riken.jp)
Galactose1
Carbohydrate intolerances with early onset and genetic cause include congenital sucrase-isomaltase deficiency (CSID), glucose-galactose malabsorption (GGM) and congenital lactase deficiency (CLD). (blueprintgenetics.com)
Genes11
The 3 genes required for inclusion of the immunodominant N- acetylglucosamine side chain within the group A carbohydrate ( gacI, gacJ , and gacK ) are shown in red. (cdc.gov)
The relative sequence identities of the 3 different regions of progeny (bottom) gac cluster genes with the group A S. pyogenes donor (top) and group C S. equisimilis recipient (middle) are indicated. (cdc.gov)
The middle segment (asterisk) indicates a range of 56%-77% sequence identity between each of the 8 structural genes ( gacF-pepT ) that were received intact from the S. pyogenes donor. (cdc.gov)
gccA-N , group C carbohydrate biosynthetic genes. (cdc.gov)
2] "Carbohydrate utilization in Streptococcus thermophilus: characterization of the genes for aldose 1-epimerase (mutarotase) and UDPglucose 4-epimerase. (tcdb.org)
The depletion of DOM over time was strongly correlated with increases in expression of many genes associated with heterotrophy (e.g., amino acid, fatty acid, and carbohydrate metabolism) belonging to a Hydrogenophaga strain that accounted for a relatively large percentage (~8%) of the metatranscriptome. (frontiersin.org)
Transcriptome analyses showed that more than 61% of the lipid- and carbohydrate-related genes were regulated in rapeseed and castor bean, but only 20.1% of the lipid-related genes and 22.5% of the carbohydrate-related genes were regulated in maize. (researchsquare.com)
Using combination of chromatin immunoprecipitation and genome sequence analysis, we detected 55 CcpA binding sites corresponding to 140 genes directly controlled by CcpA. (studyres.com)
The nucleotide sequences of rbsD , rbsA , and rbsC genes of Escherichia coli K 12. (microbiologyresearch.org)
Transient transfection of the human breast cancer cell line MDA-MB-231 with the siRNAs for carbohydrate (chondroitin 4) sulfotransferase-11 ( CHST11 ) and chondroitin sulfate proteoglycan 4 ( CSPG4 ) was used to investigate the involvement of these genes in expression of surface P-selectin ligands. (biomedcentral.com)
Protein8
A protein comprising a polypeptide sequence having at least 70% sequence identity to SEQ ID NO: 6, SEQ ID NO: 2 or SEQ ID NO: 4. (justia.com)
The protein has ketose 3-epimerase activity. (justia.com)
The disclosure provides a method of producing allulose by contacting a protein having at least 90% sequence identity to the amino acid sequence of SEQ ID NO: 6 with a fructose substrate, wherein the protein has allulose 3-epimerase activity, and at least partially purifying the allulose. (justia.com)
This was gradually expanded into various methods in bioinformatics, in particular for sequence analysis and protein structure prediction. (ntnu.edu)
Accepted August 23, 2012 ABSTRACT The catabolite control protein CcpA is a pleiotropic regulator that mediates the global transcriptional response to rapidly catabolizable carbohydrates, like glucose in Gram-positive bacteria. (studyres.com)
Proteoglycans are complex macromolecules comprised of a core protein and one or more covalently attached glycosaminoglycans (GAG) chains so that structurally they are both proteins and carbohydrates. (openbiochemistryjournal.com)
This occurs through the downregulation of methylmalonyl coenzyme A epimerase (MCEE), mediated by an extracellular signal-regulated kinase 2-driven transcription factor Sp1/early growth response protein 1 transcriptional switch driven by metastatic signalling at its promoter level. (biomed.news)
IBS is characterized by a multi-omics microbial signature indicating increased capacity to utilize fermentable carbohydrates-consistent with the clinical benefit of diets restricting this energy source-that also includes multiple previously unrecognized metabolites and metabolic pathways. (biomedcentral.com)
Concurrently, the PPP can transmute the carbon skeletons of dietary carbohydrates into intermediates apt for glycolytic and gluconeogenic pathways, thereby enabling the cell to adeptly navigate through the metabolic intricacies and adapt to varying physiological contexts. (microbiologynote.com)
It was also possible to distinguish between the mutant and parent strains by direct nucleotide sequence analysis of the galE gene. (ox.ac.uk)
Fecal samples were collected from a racially/ethnically diverse cohort of 495 subjects, including 318 IBS patients and 177 healthy controls, for analysis by 16S rRNA gene sequencing ( n = 486), metatranscriptomics ( n = 327), and untargeted metabolomics ( n = 368). (biomedcentral.com)
It is a product of the polyubiquitin gene which contains multiple copies of the ubiquitin coding sequence. (doctorinternet.com)
Kinase1
The 5‐carbon sugar phosphates are interconverted by the action of epimerase and isomerase to yield ribulose‐5‐phosphate, which is phosphorylated by the enzyme ribulose phosphate kinase to make RuBP, the acceptor of CO 2 . (cliffsnotes.com)
Fructose2
IBS further showed transcriptional upregulation of enzymes involved in fructose and glucan metabolism as well as the succinate pathway of carbohydrate fermentation. (biomedcentral.com)
D-Fructose + D-Glucose Classical Galactosemia on Diet Autosomal Recessive Inheritance Galactosemia Variants Gal-1-P-UDT GalKinase Epimerase 9p13 - p21 17q21-q22 1p32 - pter Duarte Los Angeles Indian Rennes Philadelphia Negro Chicago A 2-day-old female infant is refusing to feed and has become increasingly lethargic and hypotonic over the past 2 hours. (abcdocz.com)
FGGY1
N-terminal domain, C-terminal domain, FGGY family of carbohydrate kinases [InterProScan]. (ntu.edu.sg)
Catabolic1
Numerous carbohydrates, including glucose, meet their catabolic end in $ycolysis after being transformed into glycolytic intermediates. (microbiologynote.com)
Escherichia1
5'-monophosphate deaminase from Streptomyces murinus, D-allulose 3-epimerase from Arthrobacter globiformis expressed in Escherichia coli , carbohydrate-derived fulvic acid, jagua (genipin-glycine) blue (Jagua blue), lipase from Mucor javanicus and phosphatidylinositol-specific phospholipase C expressed in Pseudomonas fluorescens ). (who.int)
Streptococcus1
Genetic relationships deduced from emm and multilocus sequence typing of invasive Streptococcus dysgalactiae subsp. (cdc.gov)
Enzymes1
Although the steps following dTDP-4-keto-6-deoxyglucose have not been confirmed in vitro, the high degree of sequence similarity with homologous enzymes from other organisms suggests that the mechanism proceeds as detailed at right. (wikipedia.org)
Acceptor1
The rest of the Calvin cycle is involved in interconversion of carbohydrates to make glucose (or starch) and the regeneration of the ribulose‐bisphosphate acceptor. (cliffsnotes.com)
Characterization1
Population and whole genome sequence based characterization of invasive group A streptococci recovered in the United States during 2015. (cdc.gov)
Chains2
Chitin is a biological polymer consisting of carbohydrate molecules bonded together to form long chains of polysaccharides. (biomedcentral.com)
The stereo- and regioselective assembly of target carbohydrate chains was conducted using uniform monosaccharide synthetic blocks. (bvsalud.org)
Genome2
Draft Genome Sequence of the Symbiotically Competent Cyanobacterium Nostoc sp. (uit.no)
Genome data reveals a high proportion of pseudogenes in this species, many of which were, in their functional state, involved in defense or transport of carbohydrates and inorganic ions. (up.ac.za)
Biomass2
One approach to un-locking the potential in this abundant feedstock is to separate the lignin from the carbohydrate fraction of the biomass via extensive pre-treatment of the lignocellulose involving, for exam-ple, steam-explosion and/or acid hydrolysis. (banksolar.ru)
These pre-treatments are designed to allow the carbohydrate portion of the biomass to be broken down into simple sugars, for example by en-zymatic hydrolysis using exogenously added cellulases to release fermentable sugars [ 12 ]. (banksolar.ru)
Ligand1
Examples of map improvement at various resolutions are provided and include model completion and reconstruction of absent parts, sequence correction, and ligand validation in drug-target structures. (tamu.edu)
For the majority of humans it is the primary carbohydrate source in the diet. (microbiologynote.com)
The use of food crops as a source of carbohydrate feed-stocks by these processes requires high-quality agricultural land. (banksolar.ru)
Species1
Xylans are defined as carbohydrate polymers consisting of a β-1,4-xylosyl (Xyl p ) backbone, although xylans containing a β-1,3 and mixed linkage β-1,4-1,3 backbone structure have been found in algal species [ 9 ]. (biomedcentral.com)
Analysis1
To develop novel quality control tests that enhanced and extended existing procedures, the attenuated vaccine strain Salmonella typhi Ty21a and its parent strain Ty2 were characterized by pulsed-field gel electrophoresis (PFGE) and direct nucleotide sequence analysis. (ox.ac.uk)
Function1
IBS was associated with global alterations in microbiome composition by 16S rRNA sequencing and metatranscriptomics, and in microbiome function by predicted metagenomics, metatranscriptomics, and metabolomics. (biomedcentral.com)
Crystal1
The crystal structure of the N-acetylglucosamine 2-epimerase from Nostoc sp. (uit.no)
Regions1
Phylogenetic analyses were performed with special care to avoid any pitfalls associated with the peculiarities of these sequences (e.g. highly variable regions, truncated or recombined sequences, long-branch attraction). (biomedcentral.com)