Gene Expression RegulationGene Expression ProfilingBase SequenceGene Expression Regulation, PlantTranscription, GeneticMolecular Sequence DataOligonucleotide Array Sequence AnalysisRNA, MessengerPromoter Regions, GeneticMicroRNAsGene Expression Regulation, DevelopmentalGene ExpressionDNA ReplicationTranscription FactorsRNA, UntranslatedPlasmidsDNA-Binding ProteinsChromatinComputational BiologyCrithidia fasciculataGene Expression Regulation, ViralGenomeModels, GeneticBinding SitesViral ProteinsNucleic Acid ConformationDNA HelicasesCell LineGene Expression Regulation, NeoplasticGene Expression Regulation, ArchaealGene Expression Regulation, FungalDNA, ViralMutationAmino Acid SequenceAlgorithmsGenes, ViralEscherichia coliSequence Analysis, DNAReverse Transcriptase Polymerase Chain ReactionGenome, ViralBacterial ProteinsGenetic Complementation TestTrans-ActivatorsDNA, BacterialGenes, BacterialRestriction MappingCell CycleReplication Protein ACloning, MolecularCells, CulturedSaccharomyces cerevisiaeTranscriptomeSignal TransductionReplication OriginRNA StabilityDown-RegulationRNA, ViralGene Expression Regulation, Enzymologic3' Untranslated RegionsGene Expression Regulation, BacterialVirus ReplicationGene Regulatory NetworksCell Line, Tumor5' Untranslated RegionsUp-RegulationHistonesSequence Analysis, RNAModels, BiologicalDNA Replication TimingEvolution, MolecularEpigenesis, GeneticConserved SequenceRepliconAlternative SplicingDNADNA MethylationArabidopsisHeLa CellsReplication Protein CNuclear ProteinsProtein BindingGene Expression Regulation, LeukemicS PhaseDNA PrimersTransfectionHIV-1Cell NucleusCell Cycle ProteinsSoftwareGenes, ReporterTime FactorsRNAPolymerase Chain ReactionCluster AnalysisDNA-Directed DNA PolymerasePhenotypeGenetic VectorsRecombination, GeneticRepressor ProteinsViral Nonstructural Proteins