• residue
  • Cysteine on the other hand can react with another cysteine residue and thereby form a cross link stabilizing the whole structure. (wikipedia.org)
  • PANAV uses residue-specific and secondary structure-specific chemical shift distributions that were calculated over short (3-6 residue) fragments of correctly referenced proteins (found in RefDB) to identify mis-assigned resonances. (wikipedia.org)
  • assessment
  • Two new RCCS sets are presented here, determined in dimethyl sulfoxide (DMSO) and chloroform:methanol:water (4:4:1 by volume) at 298 K. A web-based program, CS-CHEMeleon, has been implemented to determine the accuracy of secondary structure assessment by calculating and comparing Δδ values for various RCCS datasets. (springer.com)
  • Every two years, the performance of current methods is assessed in the CASP experiment (Critical Assessment of Techniques for Protein Structure Prediction). (wikipedia.org)
  • LiveBench-8: the large-scale, continuous assessment of automated protein structure prediction. (wikipedia.org)
  • Bayesian
  • Previous work by Hunter and States had applied a similar Bayesian classification method, AutoClass, to protein data with site position represented by 3 Cartesian co-ordinates for each of the α-Carbon, β-Carbon and Nitrogen, totalling 9 co-ordinates. (psu.edu)
  • abstract
  • Abstract Tricodon regions on messenger RNAs corresponding to a set of proteins from Escherichia coli were scrutinized for their translation speed. (bio.net)
  • Background: Although methods based on highly abstract descriptions of protein structures, such as VAST and TOPS, can perform very fast protein structure comparison, the results can lack a high degree of biological significance. (ebscohost.com)