Gene Expression ProfilingGene ExpressionGene Expression RegulationOligonucleotide Array Sequence AnalysisRNA, MessengerTranscription, GeneticBase SequenceMolecular Sequence DataPromoter Regions, GeneticTranscription FactorsDatabases, GeneticModels, GeneticMutationGenesPolymerase Chain ReactionMultigene FamilyComputational BiologyGene Expression Regulation, DevelopmentalPhenotypeAlgorithmsSoftwareDNAReverse Transcriptase Polymerase Chain ReactionGene Expression Regulation, NeoplasticPhylogenyGene Expression Regulation, EnzymologicGene Expression Regulation, PlantGene Expression Regulation, BacterialGene Expression Regulation, ViralSignal TransductionDNA-Binding ProteinsCell LineCells, CulturedCluster AnalysisTranscriptomeGene Expression Regulation, FungalGenes, ReporterMicroarray AnalysisUp-RegulationCell DifferentiationTransfectionDNA PrimersBlotting, NorthernTime FactorsRNAAmino Acid SequenceCell Line, TumorTranscriptional ActivationDown-RegulationIn Situ HybridizationNuclear ProteinsGene Regulatory NetworksTrans-ActivatorsModels, BiologicalMice, Inbred C57BLRepressor ProteinsDNA, ComplementaryReal-Time Polymerase Chain ReactionBinding SitesLiverProtein BindingHomeodomain ProteinsReproducibility of ResultsTumor Cells, CulturedBlotting, WesternLuciferasesOrgan SpecificityCell NucleusPlasmidsHistonesCloning, MolecularImmunohistochemistrySequence Analysis, DNAMicroRNAsMice, TransgenicEpigenesis, GeneticRats, Sprague-DawleyGenetic VectorsBacterial ProteinsGene SilencingRegulatory Sequences, Nucleic AcidExpressed Sequence TagsDNA MethylationEnhancer Elements, GeneticGenomicsChromatin ImmunoprecipitationProteinsResponse ElementsArabidopsisCell ProliferationRNA InterferenceMice, KnockoutChromatinGene LibraryRNA, Small InterferingGenes, PlantFibroblastsHeLa CellsNF-kappa BRecombinant Fusion Proteins