• This dataset contains the digitized treatments in Plazi based on the original journal article Tol, Van (2016): Taxonomy and molecular phylogeny of the Platystictidae of Sri Lanka (Insecta: Odonata). (gbif.org)
  • Barbara Brown and colleagues' paper has been cited 20 times since publication according to the web of knowledge including in a number of similar studies on invertebrate phylogeny and taxonomy such as spiders and butterflies . (lincolnecology.org.nz)
  • A molecular phylogeny and recent taxonomic revision for Indian species of the scolopendrid Digitipes Attems, 1930 , permit variability of traditional taxonomic characters for Scolopendridae to be mapped onto a phylogeny. (ncbs.res.in)
  • In addition to a taxonomic revision, a molecular phylogeny of the family that includes representatives of all biological species clarifies the evolutionary relationships. (uni-muenchen.de)
  • Shimpei F. Hiruta , Norio Kobayashi , Toru Katoh , and Hiroshi Kajihara "Molecular Phylogeny of Cypridoid Freshwater Ostracods (Crustacea: Ostracoda), Inferred from 18S and 28S rDNA Sequences," Zoological Science 33(2), 179-185, (1 April 2016). (bioone.org)
  • Chapter 2 presents a molecular phylogeny of hemichordates based on nuclear ribosomal 18S rDNA and two mitochondrial genes. (auburn.edu)
  • Molecular phylogeny, based on large subunit ribosomal DNA (LSU rDNA) and internal transcribed spacer (ITS) sequences, reveals that strain GM29 is nested within the well-resolved A. poporum complex, but forms a sister Glade either to ribotype B (ITS) or ribotype C (LSU). (lsu.edu)
  • We inferred Maximum Likelihood and Bayesian phylogenies from data of five DNA regions: nrLSU rDNA, nrSSU rDNA, ITS rDNA, and the protein coding genes RPB2, and TEF1. (acguanacaste.ac.cr)
  • 2003. Molecular phylogeny of the stingless bees (Apidae, Apinae, Meliponini) inferred from mitochondrial 16S rDNA sequences. (ugm.ac.id)
  • Here, we present the first complete view of Symbiodinium phylogeny based on concatenated partial sequences of chloroplast 23S-rDNA (cp23S) and nuclear 28S-rDNA (nr28S) genes, including all known Symbiodinium lineages. (unige.ch)
  • Neste estudo, foram seqüenciados completamente os marcadores moleculares nucleares SSU rDNA e ITS2 para os táxons infra-genéricos Sargassum cymosum var. (usp.br)
  • These species-Cavenderia basinodulosa, C. canoespora, Heterostelium radiatum, H. versatile, and Raperostelium stabile-are described based on both morphological characteristics and molecular data, with sequence data from the rDNA small subunit (SSU). (lu.se)
  • Using this new phylogenetic framework and molecular dating methodologies, our study allows some more detailed classification of the former Micromys and Pithecheir divisions, while confirming their polyphyletic status. (edu.au)
  • This study provides a basis to further understand the molecular classification within Pelagodinium combining genetic, morphological, pigment, and behavioral data. (e-algae.org)
  • We discuss theories and models based on molecular phylogenies, such as APGIV, the modern classification system of angiosperms. (lu.se)
  • The phylogeny, classification, and diversity of prokaryotic microorganisms. (lu.se)
  • 2012) HPV16 genetic variants: phylogeny and classification based on E6 and LCR. (who.int)
  • On a robust genetic phylogeny maximum likelihood methods recover migration and monochromatism as the ancestral state in warblers. (frontiersin.org)
  • However, maximum likelihood ratio tests rejected a global molecular clock. (unige.ch)
  • A combined approach involving the analysis of one paternal (TSPY) and two maternal (cyt b and 12S-16S rRNA) molecular markers enabled us to resolve the phylogenetic relationships within this lineage. (ipb.ac.id)
  • 2014. Molecular phylogeny of Malaysian stingless bee (Hymenoptera: Apidae: Meliponini) revealed using partial 16s rRNA mitochondrial gene. (ugm.ac.id)
  • Using a variety of phylogenetic methods, 18S rRNA phylogenies indicate that the genus Trypanosoma is not monophyletic. (biomedcentral.com)
  • We will show that phylogenies based on 18S ribosomal RNA (18S rRNA) genes have provided an answer to this question that appears inconsistent with the results of the majority of phylogenies based on available protein sequences. (biomedcentral.com)
  • In one of the earliest 18S rRNA phylogenies of trypanosomes, T. brucei clustered outside a group that included T. cruzi , other American trypanosomes, and members of Leishmania and six other genera of Trypanosomatidae [ 1 ]. (biomedcentral.com)
  • Molecular phylogeny, evolutionary rates, and divergence timing of the symbiotic dinoflagellate genus Symbiodinium. (unige.ch)
  • As with most other single celled organisms, evolutionary relationships within Trypanosomatidae were very poorly known prior to the availability of molecular data because there are few morphological characters documenting relationships within this family. (biomedcentral.com)
  • The advent of molecular sequence data provided many additional characters for phylogenetic analysis, but so far evolutionary relationships within the family remain poorly resolved even by molecular data [ 1 - 7 ]. (biomedcentral.com)
  • Morphology and molecular study of Pterosiphonia arenosa sp. (e-algae.org)
  • Morphology, Molecular Phylogeny And Azaspiracid Profile Of Azadinium P" by Zhaohe Luo, Bernd Krock et al. (lsu.edu)
  • MacClade 4: analysis of phylogeny and character evolution. (biomedcentral.com)
  • Presently I teach at the courses BioR31 Molecular Biotechnology, BIOR76 Plant Function, BIOB10 Botany, EXTA70 The Biology of the Cell, and BIOA11 Genetic and Evolution. (lu.se)
  • Molecular epidemiology, evolution and phylogeny of SARS coronavirus. (cdc.gov)
  • Molecular phylogeny of the brown algal genus Petrospongium Nägeli ex Kütz. (mnhn.fr)
  • The phylogenetic studies of the genus Sargassum are scarce and limited to a few molecular markers, presenting low resolution for inter-specific analysis and are available only for species from the Indo-Pacific and the North Atlantic. (usp.br)
  • has been investigated using molecular phylogenetic analysis based on rbc L and psa A sequences. (mnhn.fr)
  • It is, therefore, designated as a new ribotype, termed as ribotype D. LSU and ITS sequences similarity among different ribotypes of A. poporum ranges from 95.4% to 98.2%, and from 97.1% to 99.2% respectively, suggesting that the LSU fragment is a better candidate for molecular discrimination. (lsu.edu)
  • This study is the first to analyze sequences from different molecular markers for species from the South Atlantic. (usp.br)
  • Molecular epidemiology of Anaplasma spp. (bvsalud.org)
  • The In the present work, we performed a molecular survey of the epidemiology of HCV shows some geographic features for the HCV variants that circulate in Mar del Plata and, using sequence different subtypes. (cdc.gov)
  • Molecular phylogeny of tribe Dipterocarpeae (family Dipterocarpaceae) based on sequence data of chloroplast and nuclear DNA. (uni-goettingen.de)
  • 2006. Molecular phylogeny of Dipterocarpaceae in Indonesia based on chloroplast DNA. (uni-goettingen.de)
  • Molecular phylogeny of Symbiodinium, initially inferred using nuclear ribosomal genes, was recently confirmed by studies of chloroplastic and mitochondrial genes, but with limited taxon sampling and low resolution. (unige.ch)
  • Here we present a phylogeny of the order Phyllachorales based on sequence data of 29 species with a broad host range resulting from a wide geographical sampling. (acguanacaste.ac.cr)
  • HEVnet: a One Health, collaborative, interdisciplinary network and sequence data repository for enhanced hepatitis E virus molecular typing, characterisation and epidemiological investigations. (cdc.gov)
  • Andrea Waeschenbach (NERC Postdoctoral Fellow, Zoology), Paul Taylor (Palaeontology) and Tim Littlewood (Zoology) have had accepted for publication the most comprehensive molecular phylogeny of bryozoans to date, using mitochondrial and ribosomal genes. (nhm.ac.uk)
  • In this study, DNA fragment of the mitochondrial cytochrome c oxidase subunit I (COXI) gene of H. Lepturus for the molecular phylogenetic analysis was amplified. (ac.ir)
  • Dynamics, genetic diversity and phylogeny of picocyano- bacteria (Synechococcus spp. (koeltz.com)
  • Diversity and Phylogeny of the Moncotyledons: Contributions from Monocots V: The 5th International Conference on Comparative Biology of Monocotyledons. (koeltz.com)
  • Bayesian inference of phylogeny combines the information in the prior and in the data likelihood to create the so-called posterior probability of trees, which is the probability that the tree is correct given the data, the prior and the likelihood model. (wikipedia.org)
  • Bayesian inference was introduced into molecular phylogenetics in the 1990s by three independent groups: Bruce Rannala and Ziheng Yang in Berkeley, Bob Mau in Madison, and Shuying Li in University of Iowa, the last two being PhD students at the time. (wikipedia.org)
  • Several enigmatic species from these divisions have been missing from molecular studies, preventing a rigorous revision of phylogenetic relationships. (edu.au)
  • The characterisation of environmental DNA (eDNA) from sediment and seawater using metabarcoding offers a powerful molecular lens to observe marine biota and provides a series of 'snapshots' across a broad spectrum of eukaryotic organisms. (nature.com)
  • Two large clades comprise Polygonaceae, generally corresponding to those found in previous molecular analyses. (urosario.edu.co)
  • Here we briefly review some of the major results of previous molecular phylogenetic analyses of Trypanosomatidae and present new analyses based on 42 protein families. (biomedcentral.com)
  • The molecular survey of HCV provides some clues about the epidemiological status of the infections in a local scale and the phylogenetic and demographic reconstruction analyses complement this study by inferring whether the infections of certain subtypes are in a steady state or expanding. (cdc.gov)
  • The course will cover the theory and practice of phylogenetic inference from molecular data and introduce some of the most used methods and computer programs. (lu.se)
  • Female song is generally not reconstructed as present in any deep nodes of the phylogeny, suggesting that most extant species with female song evolved this trait independently and relatively recently. (frontiersin.org)
  • Since theses species are unquestioned outgroups to both Trypanosomatidae and Bodonidae, the phylogeny of Wright et al. (biomedcentral.com)
  • Especially amongst the lower orders we are lacking phylogenies, we might be studying fossil data where the DNA signal has degraded and in fact we are still discovering new species (even among the higher orders). (lu.se)
  • In one of these , morphological characters were overlaid onto the molecular phylogeny created from this research resulting in the origin and history of five morphological characters being more fully understood. (lincolnecology.org.nz)
  • 2015-Present: Professor in Plant Molecular Biology, Department of Biology, Lund University. (lu.se)
  • Citation: Culasso ACA, Elizalde M, Campos RH, Barbini L (2012) Molecular Survey of Hepatitis C Virus in the Touristic City of Mar Del Plata, Argentina. (cdc.gov)
  • The Scolodontidae are shown categorically to be the sister group to all other stylommatophoran taxa with robust support and with all phylogeny reconstruction methods. (nottingham.ac.uk)
  • The approach has become very popular since the release of the MrBayes software in 2001, and is now one of the most popular methods in molecular phylogenetics. (wikipedia.org)
  • I very often use historic barley ( Hordeum vulgare L.) mutants which were isolated more than 50 years ago and analyze them with modern molecular techniques and biochemical methods. (lu.se)
  • We also complemented the molecular data already available for the two divisions with new data from Sundaic Chiropodomys, Indian Vandeleuria oleracea and the recently described Sulawesian Margaretamys christinae. (edu.au)
  • The purpose of the course of molecular phylogeny is to bring theoretical knowledge and good practices for data analysis using specialized softwares. (pasteur.fr)
  • One way is the use of phylogenetic analysis using molecular data. (ugm.ac.id)
  • place determination of stingless bees sampling, sampling, and molecular identification (DNA extraction, DNA amplification, and sequencing), followed by the data analysis using NCBI database and MEGA X software. (ugm.ac.id)
  • This course will introduce the fundamental principles of building phylogenies using molecular data as well as the latest techniques and programs in this field. (lu.se)
  • The main aim of our research is to understand the molecular details and physiological roles of the multitude of water channel-like proteins present in plants and animals. (lu.se)
  • By using the latest molecular techniques, we hope to uncover fascinating insights into Boyaca's fungi. (kew.org)
  • The phylogeny of the order Fucales was studied for the North Hemisphere genera, but is still not well understood. (usp.br)
  • This study provides molecular phylogenies for the Stylommatophora and Hygrophila at multiple scales including deep phylogenetic relationships of the major stylommatophoran and hygrophilan clades and family level relationships within the Orthurethra and Lymnaeoidea. (nottingham.ac.uk)
  • The molecular analysis helped in the description of the complex epidemiological context of a touristic city, and pointed out that some sanitary measures should be taken in order to reduce the transmission of HCV (and maybe of HIV) among IDUs. (cdc.gov)
  • The molecular survey of HCV provides some clues about the epidemiological status of HCV infections in a local scale. (cdc.gov)
  • This six-week intensive course including laboratory practice, lectures and scientific analysis workshops teaches advanced studies ont the main themes in cellular and molecular immunology. (pasteur.fr)
  • Novel molecular techniques such as bacterial tagencoded flexible (FLX) amplicon pyrosequencing (bTEFAP) may be a useful for the characterizing of bioaerosols. (cdc.gov)
  • A consensus phylogeny was constructed from a matrix of reciprocal AID measurements using four distinct phylogenetic algorithms. (nova.edu)
  • Furthermore, the fast processing speed of molecular techniques may revolutionize the ability to identify the phylogeny and concentration of bioaerosols. (cdc.gov)
  • In my research I try to understand molecular process in plants related to design of plant architecture, time to flowering, chlorophyll biosynthesis and wax biosynthesis. (lu.se)
  • Volume 050: Ruck, Elizabeth C. and Patrick J. Kociolek: Preliminary Phylogeny of the Family Surirellaceae (Bacillariophyta). (koeltz.com)