AnatomyOrganismsDiseasesChemicals and DrugsAnalytical, Diagnostic and Therapeutic Techniques and EquipmentPsychiatry and PsychologyPhenomena and ProcessesDisciplines and OccupationsAnthropology, Education, Sociology and Social PhenomenaTechnology, Industry, AgricultureInformation ScienceNamed GroupsHealth CareGeographicals
GenotypePolymorphism, GeneticReproducibility of ResultsPolymorphism, Single NucleotideAllelesGene FrequencyGenetic Predisposition to DiseaseGenetic VariationCase-Control StudiesPolymerase Chain ReactionSensitivity and SpecificityTime FactorsPhenotypeSequence Analysis, DNAPhylogenyPolymorphism, Restriction Fragment LengthMolecular Sequence DataRisk FactorsHepacivirusHaplotypesReference ValuesObserver VariationProspective StudiesAlgorithmsHomozygoteChinaAsian Continental Ancestry GroupMutationBase SequenceCohort StudiesCalibrationAnalysis of VarianceGenetic MarkersMolecular EpidemiologyMethylenetetrahydrofolate Reductase (NADPH2)Predictive Value of TestsModels, BiologicalHeterozygoteEquipment DesignBiological MarkersModels, GeneticImage Processing, Computer-AssistedCluster AnalysisGlutathione TransferaseRegression AnalysisGenotyping TechniquesComputer SimulationLinear ModelsRNA, ViralHepatitis CTreatment OutcomeHepatitis C, ChronicLinkage DisequilibriumPregnancyKineticsImaging, Three-DimensionalLuminescent MeasurementsCattleBlood PressureAnthropometryPrevalenceMagnetic Resonance ImagingEuropean Continental Ancestry GroupModels, StatisticalRibavirinSeverity of Illness IndexJapanHepatitis B virusCross-Sectional StudiesPeptidyl-Dipeptidase ACatechol O-MethyltransferaseAntiviral AgentsSwineOdds RatioAge FactorsFollow-Up StudiesBlood Flow VelocityRetrospective StudiesDNA PrimersInfant, NewbornBlood Pressure DeterminationReference StandardsWaterPolyethylene GlycolsPhantoms, ImagingMethodsDNA, ViralOxygenBrainTemperatureSex FactorsInterferon-alphaApolipoproteins EBody WeightDNALung Volume MeasurementsHydrogen-Ion ConcentrationData Interpretation, StatisticalLogistic ModelsStatistics, Nonparametric
CorrelationSNPsNasalAssaysPolymorphismGenomicPolymeraseAssayGenesToleranceGeneMethylationPredictionInteractionFluorescenceTissueSpecimenChronicSamplesParticipantsGenomeLaboratoryDiagnosisAnalysisCognitiveSignificantlyPatientsLevelsResultsWaterDataTotalAnimalsGeneralCommonStudyMethodBloodAnimalArticleStudies
Correlation3
  • Correlation between nasal potential difference measurements, genotype and clinical condition in patients with cystic fibrosis. (ox.ac.uk)
  • To identify mutations in COL2A1 and COL11A1 genes and to examine the genotype-phenotype correlation in a cohort of Chinese patients with Stickler syndrome. (molvis.org)
  • Analysis of the genotype-phenotype correlation showed that the early onset of high myopia with vitreous abnormalities may serve as a key indicator of Stickler syndrome, while the existence of mandibular protrusion in pediatric patients may be an efficient indicator for the absence of mutations in COL2A1 and COL11A1 . (molvis.org)
SNPs2
  • The detection of SNPs ( SNP Genotyping ) can be achieved with a number of different methods. (bmglabtech.com)
  • The Amplifluor ® SNPs HT Genotyping System from Millipore was used to screen a number of samples with the help of a BMG LABTECH microplate reader. (bmglabtech.com)
Nasal2
  • We tested the relationships between residual chloride secretion, as measured by nasal potential difference (PD) and the type of mutation (genotypes expressing apical cystic fibrosis transmembrane conductance regulator (CFTR) protein versus those that do not) and clinical status. (ox.ac.uk)
  • Spirometry and symptoms were remeasured after the workshift, and nasal lavage fluid was collected for cytokine measurement. (cdc.gov)
Assays2
  • Eleven studies provided information for the analytic validity of genotyping assays and 105 for the analytic validity of platelet reactivity assays. (ahrq.gov)
  • Diagnosis is assisted by urine electrolyte measurements and hormone assays but is typically a diagnosis of exclusion. (msdmanuals.com)
Polymorphism1
  • All volunteers were retrospectively genotyped for the eNOS G298T polymorphism and the effect of genotype on the measurements is discussed. (cambridge.org)
Genomic4
  • However, benefits of the use of genomic information and methodology for genetic evaluations are missing when genotype-by-environment interactions (G × E) exist between bio-secure breeding (B) environments and commercial production (C) environments. (springer.com)
  • The use of combined pedigree and genomic information increased population accuracy of EBV, and reduced bias of EBV prediction for genotyped birds compared to the use of pedigree information only. (springer.com)
  • The G × E interaction was strong for BW traits of broilers measured in environments B and C. The use of combined pedigree and genomic information increased population accuracy of EBV substantially for genotyped birds in the B environment compared to the use of pedigree information only. (springer.com)
  • Additionally, a subset of 2428 subjects was genotyped and information on three genomic loci was used in this study. (rrh.org.au)
Polymerase2
Assay2
  • Generally, agreement was higher between measurements obtained from the same assay using different agonist concentrations than between different assay types. (ahrq.gov)
  • An RLU measurement less than the Cutoff Value indicates the absence of the specific HPV DNA sequences tested or HPV DNA levels below the detection limit of the assay. (cdc.gov)
Genes2
  • Thus, by evaluating these two genes, patients may obtain an early diagnosis, and early prophylactic measurements may be obtained. (molvis.org)
  • This may not directly relate to the genotype, or the genes regulating the defect that you are trying to manage. (vin.com)
Tolerance1
  • After a 10-week saline irrigation treatment at 50 m m NaCl, SES2 appeared to have the highest salt tolerance of all genotypes based on no significant change in the number of secondary branches. (ashs.org)
Gene4
  • Illumina HumanMethylation450K array) or other data types such as gene expression levels or genotype information. (bioconductor.org)
  • Direct gene tests are specific for mutations and are a direct measurement of the genotype. (vin.com)
  • This includes equipment and software for transcript quantitation, gene expression analysis, PCR melting curves, SNP genotyping, whole-genome analysis, viral particle titration. (massgeneral.org)
  • In what follows we limit ourselves to the analysis of gene expression measurements obtained using microarrays with small spots of DNA fixed to glass slides. (lu.se)
Methylation3
  • This study was undertaken to evaluate whether DNA methylation can mediate the interaction between genotype and smoking in the development of anti-citrullinated peptide antibody (ACPA)-positive RA. (biomedcentral.com)
  • RaMWAS is primarily designed for studies of methylation measurements from enrichment platforms. (bioconductor.org)
  • However, RaMWAS can also be useful for the analysis of methylation measurements from other platforms (e.g. (bioconductor.org)
Prediction2
  • Crop models are valuable prediction tools where environments, soils, genotypes and climatic conditions vary. (scielo.org.za)
  • A slight increase in accuracy of EBV was also observed for non-genotyped birds, but the bias of EBV prediction increased for non-genotyped birds. (springer.com)
Interaction1
  • The difference in production conditions between highly bio-secure breeding (B) and commercial production environments (C) can lead to genotype-by-environment interaction (G × E) in broiler chicken [ 1 ]. (springer.com)
Fluorescence1
  • Abstract: The effect of increasing salinity and freezing stress singly and in combination on a range of chlorophyll fluorescence parameters in foliar tissue of six Crataegus genotypes was examined. (isa-arbor.com)
Tissue1
  • D ) Quantification of molecular layer length in Ttbk2 c.mut cerebellar tissue (each point represents one measurement, 75 measurements overall. (elifesciences.org)
Specimen2
  • Noninvasive genotyping is a modern technique for obtaining DNA for genotyping that is characterized by the indirect sampling of specimen, not requiring harm to, handling of, or even the presence of the organism of interest. (wikipedia.org)
  • An RLU measurement equal to or greater than the Cutoff Value indicates the presence of HPV DNA sequences in the specimen. (cdc.gov)
Chronic1
  • Our aim was to evaluate the prevalence of insulin resistance in Egyptian patients with chronic HCV genotype 4 infection, to assess factors associated with insulin resistance and to test the impact of insulin resistance on outcomes of treatment with pegylated interferon/ribavirin. (who.int)
Samples2
  • Despite the potential that noninvasive genotyping has in conservation genetics efforts, the efficiency of this method is in question, as field samples often suffer from degradation and contamination or are difficult to procure. (wikipedia.org)
  • The method by which samples are collected in noninvasive genotyping is what separates the technique from traditional genotyping, and there are a number of ways that this is accomplished. (wikipedia.org)
Participants3
  • Participants will receive free genotyping and help with interpreting the results. (blogspot.com)
  • Participants will receive free genotyping. (blogspot.com)
  • in the future some or all participants may receive more extensive genotyping such as exome or full genome sequencing. (blogspot.com)
Genome1
  • Just to clarify, by 'genotyping', do you mean full genome sequencing (and then providing full 3 GB of data to each participant), or something more limited? (blogspot.com)
Laboratory2
  • We used MLVA to genotype all Salmonella Typhimurium isolates referred to the NSW Enteric Reference Laboratory at the Centre for Infectious Diseases and Microbiology, NSW Health Pathology (Sydney, NSW, Australia), during August 2009-March 2016. (cdc.gov)
  • Assessments consisted of face-to-face interviews, clinical examinations, and laboratory testing, including APOE genotyping and measurements of total cholesterol and glycated hemoglobin levels. (medscape.com)
Diagnosis2
  • The most common use of noninvasive genotyping in medicine is non-invasive prenatal diagnosis (NIPD), which provides an alternative to riskier techniques such as amniocentesis. (wikipedia.org)
  • Diagnosis can be confirmed through measurement of glucocerebrosidase activity in peripheral blood leukocytes. (medscape.com)
Analysis3
  • We compared results from (1) confounder-adjusted multivariable analyses, (2) a Mendelian randomization (MR) analysis using maternal rs1051730 genotype as an instrument for smoking quantity and ease of quitting, and (3) a negative control analysis comparing maternal and mother's partner's smoking associations. (plos.org)
  • Subsequently, we developed a method for the measurement of relative allelic expression, by taking advantage of the capability for melting-curve analysis in real-time PCR. (aspetjournals.org)
  • Analysis of the allele frequencies for the three loci of SLC2A9 suggested that in all three instances the prevalence of deleterious genotypes was highest in Vis, followed by Korcula, which had higher or comparable prevalence to the city of Split. (rrh.org.au)
Cognitive1
  • What we were a little surprised to find in this model was that sleep duration, whether short, long or average, was not significant, but the sleep variability - the change in sleep across those time measurements - was significantly impacting the incidence of cognitive impairment," Samantha Keil, PhD, a postdoctoral fellow at the University of Washington, Seattle, reported at the at the annual meeting of the Associated Professional Sleep Societies. (medscape.com)
Significantly1
  • At 50 m m NaCl, sodium accumulated significantly in roots but not the leaves of three genotypes, suggesting an active shoot exclusion mechanism. (ashs.org)
Patients4
  • In cystic fibrosis (CF), the clinical condition of patients correlates poorly with genotype. (ox.ac.uk)
  • Twenty two CF patients (mean age 25.7 yrs, 11 females and 11 males, mean forced expiratory volume in one second (FEV1) 53.1% of predicted) with defined genotypes were recruited. (ox.ac.uk)
  • These results suggest that some cystic fibrosis patients, regardless of genotype, have an ability to secrete chloride when stimulated with chloride secretatagogues, and this is correlated with a better lung function. (ox.ac.uk)
  • Methods A total of 198 patients infected with HCV genotype 1 or 2 who achieved SVR after direct-acting anti-viral therapy were analysed. (medscape.com)
Levels3
  • In conservation, noninvasive genotyping has been used to supplement traditional techniques with broadly ranging levels of success. (wikipedia.org)
  • The Quantitative Real Time PCR Core, part of the Neurosciences Center at Massachusetts General Hospital, offers quantitative measurement of nucleic acid (DNA or RNA) levels using real-time PCR. (massgeneral.org)
  • This Core offers quantitative measurement of nucleic acid (DNA or RNA) levels using real-time PCR. (massgeneral.org)
Results1
  • Due to this phenomenon, linkage test results must be compared with results from other family members to determine whether they correlate with the known genotype of relatives. (vin.com)
Water2
  • Biomass and yield overestimation resulting from the use of the minimum data input calibration suggests that other parameters (water productivity, canopy sensitivity to water stress and water stress coefficient) are required to improve canopy and yield predictions for sorghum genotypes. (scielo.org.za)
  • A range of saline irrigation treatments were tested on four genotypes: tap water, 50, 200, 300, and 400 m m NaCl [Maarten's Favorite (MF)] and up to 200 m m NaCl (MP1, SES2, and CJ1). (ashs.org)
Data1
  • We also tested for enrichment of ASD EWAS CpGs for being targets of meQTL associations using available SNP genotype data in the SEED sample. (springer.com)
Total1
  • There is no significant difference between Control genotypes compared to each other for any of these metrics using a one-way ANOVA with Tukey's correction In ( A ), each point represents a field counted, 16 fields were counted in total. (elifesciences.org)
Animals3
  • Ttbk2 c.mut animals show a significant reduction in these VGLUT2+ synapse terminals (each point represents one measurement, 15 measurements per genotype, n = 3 animals. (elifesciences.org)
  • Each point represents a measurement taken from a singular dendrite, n = 3 animals. (elifesciences.org)
  • Validation animals were genotyped and non-genotyped birds in the B environment only. (springer.com)
General2
  • I begin with a brief review of psychometric measurements of intelligence, introducing the idea of a "general factor" or IQ score. (blogspot.com)
  • Rather, one has here to rely upon 2D gel measurements, which in general are quite noisy. (lu.se)
Common1
  • GWAS was performed using haplotype reference consortium(HRC)-imputed genotypes of common variants in 3,514 individuals from the first and 2,076 individuals from the second cohort of the Rotterdam Study. (frontiersin.org)
Study1
  • Study limitations include measurement error due to maternal self-report of smoking and the modest sample size for MR analyses resulting in unconfounded estimates being less precise. (plos.org)
Method1
  • [ 15-18 ] In addition, proton density fat fraction (PDFF) measurement is an MRI-based method for quantitatively assessing liver steatosis. (medscape.com)
Blood2
  • Pre-work shift measurements included spirometry, symptoms, and blood collection for TLR4 genotyping. (cdc.gov)
  • We then checked association Aβ-PET and tau-PET SUVR, APOE ε4 genotype and MRI measurements of cortical thickness, white matter lesions (WML) and cerebral blood flow (CBF). (lu.se)
Animal1
  • In ( B ), each point represents a singular measurement, three distinct primary fissures were included per group, 25 measurements were counted per animal. (elifesciences.org)
Article1
Studies1
  • Woodruff, David S. "Noninvasive genotyping and field studies of free-ranging nonhuman primates. (wikipedia.org)