• Arabidopsis
  • Aphids for library construction were raised on Arabidopsis thaliana , Nicotiana benthamiana , Brassica oleracea, B. napus , and Physalis floridana (with and without Potato leafroll virus infection). (pubmedcentralcanada.ca)
  • Data from the two MPSS libraries showed that the number of unique signatures found in A. fundyense cells is similar to that of humans and Arabidopsis thaliana , two eukaryotes that have been extensively analyzed using this method. (biomedcentral.com)
  • protein
  • We compare the photoresponses of wild-type cones with those of cones that do not express the EML1 protein. (jneurosci.org)
  • Prolactin induced protein (called GCDFP-15 in this context) in breast cyst fluid or breast tissue serves as marker of both benign and malignant apocrine metaplasia as the protein is not normally expressed in breast tissue. (wikipedia.org)
  • analysis
  • To investigate the content and regulation of the dinoflagellate genome, we performed a global analysis of the transcriptome of the toxic dinoflagellate Alexandrium fundyense under nitrate- and phosphate-limited conditions using Massively Parallel Signature Sequencing (MPSS). (biomedcentral.com)
  • human
  • While studying as a PhD student at Peking University, in 1999 Wang founded the bioinformatics group at BGI, which lead China's contribution to sequencing 1% of the Human Genome Project. (wikipedia.org)
  • analyses
  • The Web-accessible database was also linked to an informatics suite that allows on-line clustering and K-means analyses as well as Boolean and sequence-based searches of the data. (aspetjournals.org)
  • molecular
  • We compare several expressed sequence tag (EST) in the ecologically important seagrass Zostera marina (eelgrass) to elucidate the molecular genetic basis of adaptation to environmental extremes. (mpg.de)
  • This model will assess mechanisms by which environmental processing of EDCs affect their apparent toxicological properties in the environment, how molecular/cellular manifestations of EDCs are expressed, and how they ultimately impact crustacean population fitness and maintenance at the genetic, reproductive, and population levels. (epa.gov)
  • complementary DNA (cDNA) cDNA library expressed sequence tags (EST) vector (molecular biology) cloning vector https://web.archive.org/web/20080121091224/http://image.llnl.gov/image/html/iresources.shtml. (wikipedia.org)
  • data
  • Combinations of the different sequence sources attempts to maximize coverage as well as maintain integrity in the data. (wikipedia.org)
  • silico
  • In silico methods for detecting NATs suffer from several shortcomings depending on the source of sequence information. (wikipedia.org)
  • highly
  • In addition, this approach was capable of isolating highly polymorphic sequences from chloroplast and nuclear DNA without preliminary sequence information. (springer.com)
  • known
  • For ∼50% of the sequences (710 of 1431), significant matches to sequences in the National Center for Biotechnology Information database (of known or unknown function) were detected. (genetics.org)
  • Studies that use mRNA have sequences whose orientations are known, but the amount of mRNA sequence information available is small. (wikipedia.org)
  • several
  • We report the construction of the first fingerprinting array for Salvia species enriched with polymorphic and divergent DNA sequences and demonstrate the potential of this array for fingerprinting several economically important members of this genus. (springer.com)
  • found
  • Genotype is the term applied to specific changes in DNA sequence found in a mutant, while phenotype refers to all biological consequences from the presence of the mutation in question. (nybg.org)