• genes
  • In an effort to determine genes that are expressed in mycelial cultures of Neurospora crassa over the course of the circadian day, we have sequenced 13,000 cDNA clones from two time-of-day-specific libraries (morning and evening library) generating ∼20,000 sequences. (genetics.org)
  • Using these sequences, the representation of genes among the morning and evening sequences, respectively, in most cases does not reflect their expression patterns over the course of the day. (genetics.org)
  • On the basis of these data we predict that a significant proportion of the expressed Neurospora genes may be regulated by the circadian clock. (genetics.org)
  • Under heat stress, we find that 63 TUGs are differentially expressed (d.e.) at 25°C compared with lower, no-stress condition temperatures (4°C and 17°C). Approximately one-third of d.e. eelgrass genes were characteristic for the stress response of the terrestrial plant model Arabidopsis thaliana. (mpg.de)
  • Today, new technologies are allowing us to sequence individual genomes for a few thousand dollars and in a matter of days, opening up unprecedented opportunities to discover the associations between the genes encoded in the genome and their manifestations in the physical phenotypes we observe, including their associations with disease. (dana-farber.org)
  • Highly expressed genes often exhibit a high degree of codon bias whereas lowly expressed genes often contain many alternative synonymous codons [ 5 ]. (pubmedcentralcanada.ca)
  • Some laboratories have utilized transcriptomics to explore the response of chickpea to abiotic and biotic stresses such as drought, salinity, heat, cold, Fusarium oxysporum and Ascochyta rabiei differentially expressed genes and also established crosstalk between biotic and abiotic stress responses. (intechopen.com)
  • The sequence of these genes encoded all of the information required to specify the reproduction, development, and adult function of an individual organism. (nybg.org)
  • The parental isolate and progeny isolates were characterized by testing them on 25 wheat lines with different Yr genes for resistance and 10 simple sequence repeat (SSR) markers. (frontiersin.org)
  • In silico comparison of cDNA libraries identified aphid genes with tissue-specific expression patterns, and gene expression that is induced by feeding on Nicotiana benthamiana . (pubmedcentralcanada.ca)
  • These include previously unknown sequence data, a collection of expressed genes, molecular markers, and a DNA microarray that can be used to study aphid gene expression. (pubmedcentralcanada.ca)
  • Li J, Sun X, Yu G, Jia C, Liu J, Pan H. Generation and Analysis of Expressed Sequence Tags (ESTs) from Halophyte Atriplex canescens to Explore Salt-Responsive Related Genes. (mdpi.com)
  • Prediction of the coding sequences of unidentified human genes. (wikipedia.org)
  • Together they represent a more or less complete set of expressed genes from these organisms. (wikipedia.org)
  • Sequence analysis, immunological distance, and examination of evolutionarily suppressed conformational states showed that the TnI genes have evolved in close linkage with the genes encoding troponin T (TnT), another subunit of the troponin complex. (wikipedia.org)
  • protein
  • We compare the photoresponses of wild-type cones with those of cones that do not express the EML1 protein. (jneurosci.org)
  • Prolactin induced protein (called GCDFP-15 in this context) in breast cyst fluid or breast tissue serves as marker of both benign and malignant apocrine metaplasia as the protein is not normally expressed in breast tissue. (wikipedia.org)
  • human
  • The first human genome sequence-its ordered collection of chemical letters-was completed in 2000, allowing us to identify a parts list consisting of the more than 25,000 proteins that make up our cells. (dana-farber.org)
  • While studying as a PhD student at Peking University, in 1999 Wang founded the bioinformatics group at BGI, which lead China's contribution to sequencing 1% of the Human Genome Project. (wikipedia.org)
  • analyses
  • The Web-accessible database was also linked to an informatics suite that allows on-line clustering and K-means analyses as well as Boolean and sequence-based searches of the data. (aspetjournals.org)
  • silico
  • In silico methods for detecting NATs suffer from several shortcomings depending on the source of sequence information. (wikipedia.org)
  • highly
  • In addition, this approach was capable of isolating highly polymorphic sequences from chloroplast and nuclear DNA without preliminary sequence information. (springer.com)
  • data
  • Combinations of the different sequence sources attempts to maximize coverage as well as maintain integrity in the data. (wikipedia.org)
  • known
  • For ∼50% of the sequences (710 of 1431), significant matches to sequences in the National Center for Biotechnology Information database (of known or unknown function) were detected. (genetics.org)
  • Studies that use mRNA have sequences whose orientations are known, but the amount of mRNA sequence information available is small. (wikipedia.org)
  • several
  • We compare several expressed sequence tag (EST) in the ecologically important seagrass Zostera marina (eelgrass) to elucidate the molecular genetic basis of adaptation to environmental extremes. (mpg.de)
  • We report the construction of the first fingerprinting array for Salvia species enriched with polymorphic and divergent DNA sequences and demonstrate the potential of this array for fingerprinting several economically important members of this genus. (springer.com)
  • levels
  • This model will assess mechanisms by which environmental processing of EDCs affect their apparent toxicological properties in the environment, how molecular/cellular manifestations of EDCs are expressed, and how they ultimately impact crustacean population fitness and maintenance at the genetic, reproductive, and population levels. (epa.gov)
  • article
  • This article incorporates text from the United States National Library of Medicine, which is in the public domain. (wikipedia.org)