• Early phase: early genes are transcribed in the cytoplasm by viral RNA polymerase. (wikipedia.org)
  • After incubation, the reaction mixture is transferred to the Amplification Microwell, which contains two enzymes (a DNA polymerase and a restriction endonuclease) necessary for SDA. (cdc.gov)
  • This enzyme displays a DNA polymerase activity that can copy either DNA or RNA templates, and a ribonuclease H (RNase H) activity that cleaves the RNA strand of RNA-DNA heteroduplexes in a partially processive 3' to 5' endonucleasic mode. (proteopedia.org)
  • RNase H probably can proceed both in a polymerase-dependent (RNA cut into small fragments by the same RT performing DNA synthesis) and a polymerase-independent mode (cleavage of remaining RNA fragments by free RTs). (proteopedia.org)
  • In an attempt to facilitate the discovery of antiviral agents that target viral polymerase, isolated functional domains such as the PA endonuclease domain, the PB2 cap-binding domain, and the PA-PB1 interaction domains were expressed as screening targets. (hku.hk)
  • This study underscores the medical importance of polymerase functional domains as druggable targets, which may be due to the fact that these targeted areas are not only highly conserved among virus subtypes but also key to viral fitness. (hku.hk)
  • Importantly, the established screening platforms for PA endonuclease inhibitors, PB2 cap-binding inhibitors, and PA-PB1 interaction disrupters should advance the development of a category of anti-influenza drugs that target viral polymerase. (hku.hk)
  • Here, we present a simple and rapid protocol that allows sensitive and accurate determination of the VS and CS strands generated during viral infection.The method consists of a two-step qPCR in which the first step uses a strand-specific (CS or VS) labeled primer and T4 DNA polymerase that lacks strand displacement activity and makes a single copy per VS or CS strand. (bvsalud.org)
  • Next, the T4 DNA polymerase and unincorporated oligonucleotides are removed by a silica membrane spin column. (bvsalud.org)
  • The kit includes all reagents required for cell lysis, whole genome amplification using REPLI-g DNA polymerase, enzymatic DNA fragmentation and PCR-free NGS library preparation compatible with Illumina NovaSeq and other NGS instruments. (qiagen.com)
  • Additionally, the high-fidelity REPLI-g DNA polymerase introduces fewer sequencing errors than high-fidelity PCR enzymes, reducing false positives and enabling more sensitive mutation detection. (qiagen.com)
  • After cell lysis, a high-fidelity MDA reaction is used to amplify microgram amounts of gDNA using the high-fidelity REPLI-g DNA Polymerase. (qiagen.com)
  • After lysis, genomic DNA is amplified using the proof-reading, ultra-high fidelity REPLI-g DNA polymerase. (qiagen.com)
  • Tetraribonucleotides (pppACCC or pppACCA), synthesized by the T7 gene 4 protein on single-stranded DNA, are used as primers by T7 DNA polymerase to yield RNA-terminated DNA fragments. (neb.com)
  • The removal of the RNA primers is catalyzed by the 5' to 3' hydrolytic activities of either Escherichia coli DNA polymerase I or the T7 gene 6 exonuclease. (neb.com)
  • The requirement for DNA synthesis to fill the gap between adjacent DNA fragments can be fulfilled by Form II of T7 DNA polymerase but not by Form I. DNA synthesis catalyzed by Form II of T7 DNA polymerase eliminates gaps to create a substrate for DNA ligase whereas strand displacement synthesis catalyzed by Form I creates an aberrant structure that cannot be joined. (neb.com)
  • A combination of four bacteriophage proteins, gene 4 protein, Form II of T7 DNA polymerase, gene 6 exonuclease, and DNA ligase, can accomplish this overall reaction. (neb.com)
  • Polymerase Chain Reaction (PCR) stands as a revolutionary technique in molecular biology, providing researchers with a powerful tool for amplifying specific DNA sequences with unparalleled precision and efficiency. (axis-shield-density-gradient-media.com)
  • Denaturation separates the DNA strands, annealing allows primers to bind to the target sequence, and extension involves the synthesis of new DNA strands by a heat-stable DNA polymerase, often Taq polymerase. (axis-shield-density-gradient-media.com)
  • When random hexamers are coupled with a strand displacing DNA polymerase, many concatenated template copies are generated with no need for thermocycling (Dean et al. (genewiz.com)
  • Rapid Amplification of Plasmid and Phage DNA Using Phi29 DNA Polymerase and Multiply-Primed Rolling Circle Amplification. (genewiz.com)
  • This is accomplished in 3 ways: 1) competitive inhibition of viral DNA polymerase, 2) incorporation into and termination of the growing viral DNA chain, and 3) inactivation of the viral DNA polymerase. (nih.gov)
  • Resistance of HSV and VZV to acyclovir can result from qualitative and quantitative changes in the viral TK and/or DNA polymerase. (nih.gov)
  • While most of the acyclovir-resistant mutants isolated thus far from such patients have been found to be TK-deficient mutants, other mutants involving the viral TK gene (TK partial and TK altered) and DNA polymerase have been isolated. (nih.gov)
  • Core is completely uncoated as early expression ends, viral genome is now free in the cytoplasm. (wikipedia.org)
  • The second function is to play a role in nuclear localization of the viral genome at the very start of cell infection. (proteopedia.org)
  • It binds in the cytoplasm the human BAF protein which prevent autointegration of the viral genome, and might be included in virions at the ration of zero to 3 BAF dimer per virion. (proteopedia.org)
  • Reverse transcriptase/ribonuclease H (RT) is a multifunctional enzyme that converts the viral RNA genome into dsDNA in the cytoplasm, shortly after virus entry into the cell. (proteopedia.org)
  • The QIAseq Single Cell DNA Library Kit UDI provides a complete solution for whole genome sequencing from isolated single cells or low amounts of genomic DNA. (qiagen.com)
  • The QIAseq Single Cell DNA Library Kit UDI includes protocols for unbiased whole genome amplification and for target enrichment of small genomes, such as viral DNA or mitochondrial genomes. (qiagen.com)
  • The kit delivers exceptional genome coverage from single cells, populations of cells and low quantities of genomic DNA, including regions with high GC-content. (qiagen.com)
  • In comparison to PCR-based methods of whole genome amplification, the Multiple Displacement Amplification (MDA) technology included in the QIAseq Single Cell DNA Library Kit UDI eliminates PCR duplicates and minimizes GC-bias, ensuring high library diversity and maximum genome coverage. (qiagen.com)
  • The QIAseq Single Cell DNA Library Kit UDI is a complete cell-to-library solution that includes all the reagents necessary to generate high-diversity whole genome libraries from single cells or limited quantities of intact gDNA. (qiagen.com)
  • Transcription of early genes (E genes) by host RNA pol II, replication of the DNA genome by DNA strand displacement in the nucleus. (expasy.org)
  • Torque teno virus (TTV) is an unenveloped, circular, single stranded DNA virus with a genome size of approximately 3.8 kb. (prelekara.sk)
  • This transition is induced by increasing the temperature (which affects DNA bending stress and packing defects) or by varying external ionic conditions (which affects DNA-DNA repulsive interactions and overall genome stress in the capsid). (lu.se)
  • In the fluid-like state, the interstrand DNA-DNA friction of the encapsidated genome is significantly reduced due to an increase in distance between packaged DNA strands occurring with local DNA disordering. (lu.se)
  • These AFM observations suggest that dynamics of DNA ejection can be affected by a transition in mobility of the encapsidated genome. (lu.se)
  • In molecular cloning, a target DNA fragment is inserted into a vector, often a plasmid or a viral genome, using specialized enzymes like restriction endonucleases and DNA ligase. (axis-shield-density-gradient-media.com)
  • Furthermore, molecular cloning serves as the foundation for constructing genomic libraries, which are comprehensive collections of cloned DNA fragments representing an organism's entire genome. (axis-shield-density-gradient-media.com)
  • Adenovirus major core protein condenses DNA in clusters and bundles, modulating genome release and capsid internal pressure. (csic.es)
  • The viral genome is represented by a single-stranded positive-sense RNA, approximately 30 thousand base pairs (bp) long, with 14 open reading frames encoding 27 proteins [2]. (crie.ru)
  • Viral replication is cytoplasmic. (wikipedia.org)
  • Replication follows the DNA strand displacement model. (wikipedia.org)
  • Intermediate phase: Intermediate genes are expressed, triggering genomic DNA replication at approximately 100 minutes post-infection. (wikipedia.org)
  • Reference: Bacteriophage T7 DNA replication. (neb.com)
  • Replication of the lagging strand of bacteriophage T7 DNA occurs in a discontinuous fashion that requires RNA-primed DNA synthesis, the removal of the RNA primers, the replacement of the ribonucleotides with deoxyribonucleotides, and the covalent joining of adjacent DNA fragments. (neb.com)
  • All steps in the replication of a lagging strand have been coupled in a model system that catalyzes the formation of covalently closed, circular, double-stranded DNA molecules using single-stranded viral DNA as template. (neb.com)
  • We continue investigate the effects of this mechano-structural DNA transition on DNA ejection dynamics from viruses and viral replication. (lu.se)
  • This method, conceptualized by Kary B. Mullis in 1983, has since become a cornerstone in various scientific disciplines, enabling the exponential replication of targeted DNA regions. (axis-shield-density-gradient-media.com)
  • The term "cloning" refers to the replication of a specific DNA sequence or an entire organism, and in the molecular biology context, it primarily involves the generation of identical copies of a DNA fragment. (axis-shield-density-gradient-media.com)
  • The viral replication organelles within cells studied by electron microscopy. (csic.es)
  • As many as 90% of healthy individuals have serum antibodies to this virus, but less than 10% show any evidence of ongoing viral replication. (medscape.com)
  • Periods of viral replication without any clinical symptoms occur and can be detected when it is shed in the urine. (medscape.com)
  • When reactivation happens in the setting of immune suppression, viral replication ensues, causing dissemination to the brain. (medscape.com)
  • It undergoes DNA replication and synthesis of viral capsid proteins inside the cell. (medscape.com)
  • RCA was identified in natural systems as a DNA replication mechanism frequently employed in plasmid and viral propagation. (genewiz.com)
  • In vitro , acyclovir triphosphate stops replication of herpes viral DNA. (nih.gov)
  • The BDProbeTec CT Chlamydia trachomatis Amplified DNA Assays are based on the simultaneous amplification and detection of target DNA, using amplification primers and a fluorescent labeled detector probe. (cdc.gov)
  • The Strand Displacement Amplification (SDA) reagents are dried in two separate disposable microwell strips. (cdc.gov)
  • Following targeted selection, multiple displacement amplification is applied to single DNA molecules compartmentalized in droplets. (genomeweb.com)
  • This ensures unbiased amplification of large DNA fragments that are representative of the target variation in the original sample. (genomeweb.com)
  • A number of nucleic acid-based detection methods can be used to detect low levels of HIV-1 RNA or DNA, including PCR (standard, quantitative competitive, real time, in situ), branched DNA signal amplification (bDNA), strand displacement amplification (SDA), transcription-mediated amplification (TMA), and nucleic acid sequence-based amplification (NASBA). (ucsf.edu)
  • Some of the alternative technologies existing in the market include Strand Displacement Amplification (SDA) and Ligase Chain Reaction (LCR). (rapidmicromethods.com)
  • Burgeoning demand for molecular diagnostics in clinical settings is expected to drive the miniaturization of DNA-amplification technologies. (rapidmicromethods.com)
  • Popularly known as DNA-amplification-on-a-chip, the technology encompasses a microfluidic device with sensors, heating aids, and a reaction container. (rapidmicromethods.com)
  • Using RCA for DNA amplification expedites the Sanger sequencing process and allows your data to be delivered within 24 hours** of sample receipt at Azenta. (genewiz.com)
  • This allows prolonged strand displacement over multiple rounds of amplification. (genewiz.com)
  • lt;span lang="EN-US">This review presents the basic principles of application of the loop-mediated isothermal amplification (LAMP) reaction for the rapid diagnosis of coronavirus infection caused by SARS-CoV-2. (crie.ru)
  • Danish company Samplix has launched a comprehensive service program granting laboratories access to its Xdrop technology for complex genomic research including gap closing, sequencing of repeat elements, viral insertion site detection, revealing unintended CRISPR edits, and more. (genomeweb.com)
  • Xdrop enriches genomic regions longer than 100 kb from as little as 1 ng of human genomic DNA and with single-molecule resolution. (genomeweb.com)
  • Nucleocapsid protein p7 encapsulates and protects viral dimeric unspliced (genomic) RNA. (proteopedia.org)
  • Conversion of viral genomic RNA into dsDNA requires many steps. (proteopedia.org)
  • 袁碩峰 Abstract: The rapid mutability of influenza virus in conjunction with genomic reassortment between viral strains promotes the virus' ability to evade vaccines and to become resistant to antiviral drugs. (hku.hk)
  • SARS-CoV-2 genomic surveillance in Malaysia: displacement of B.1.617.2 with AY lineages as the dominant Delta variants and the introduction of Omicron during the fourth epidemic wave. (cdc.gov)
  • RT uses the 3' end of the tRNA primer to perform a short round of RNA-dependent minus-strand DNA synthesis. (proteopedia.org)
  • RT uses the 3' end of this newly synthesized short ssDNA to perform the RNA-dependent minus-strand DNA synthesis of the whole template. (proteopedia.org)
  • Secondly, RT performs DNA-directed plus-strand DNA synthesis using the PPTs that have not been removed by RNase H as primers. (proteopedia.org)
  • HTBS recruits HIV reverse transcriptase, which nucleates DNA synthesis and is aided in elongation by murine leukemia reverse transcriptase. (nature.com)
  • During reverse transcription of viral RNA, HIV-1 reverse transcriptase (RT) encounters RNA stem-loop structures that require displacement synthesis activity in which RT disrupts the RNA helix to access the template strand. (elsevierpure.com)
  • A primer extension assay was developed to assess HIV-1 RT RNA displacement synthesis activity in vitro. (elsevierpure.com)
  • Initial results revealed that HIV-1 RT performs only limited amounts of RNA displacement through long stretches of RNA duplex, with the majority of synthesis stalling at sequence-dependent pause positions. (elsevierpure.com)
  • DNA displacement synthesis through the same sequence, however, proceeded rapidly to the end of the template. (elsevierpure.com)
  • The RNA folding algorithm mfold indicated that the presence of an unpaired nucleotide, or "bulge," along the RNA duplex would promote helix melting ahead of the DNA primer terminus to create a small gap of nondisplacement synthesis. (elsevierpure.com)
  • Further analysis revealed that stalling during RNA displacement synthesis results from the displaced RNA re-annealing to the template strand thus forcing the primer terminus to become unpaired and, therefore, not extendable. (elsevierpure.com)
  • Introduction of a bulge facilitates displacement synthesis through distal regions by increasing RT processivity in the vicinity of a bulge and reducing the impact of branch migration on primer extension. (elsevierpure.com)
  • Lanciault, C & Champoux, JJ 2004, ' Single unpaired nucleotides facilitate HIV-1 reverse transcriptase displacement synthesis through duplex RNA ', Journal of Biological Chemistry , vol. 279, no. 31, pp. 32252-32261. (elsevierpure.com)
  • Extensive experiments have been performed on HIV-1 as well as other retroviruses, all suggesting that HIV-1 genetic recombination results from a "copy choice" mechanism i.e. the alternating use of two templates during the synthesis of a single viral DNA strand [ 3 ]. (biomedcentral.com)
  • Entry into the host cell is achieved by attachment of the viral proteins to host glycosaminoglycans (GAGs) mediates endocytosis of the virus into the host cell. (wikipedia.org)
  • Also cleaves Nef and Vif, probably concomitantly with viral structural proteins on maturation of virus particles (By similarity). (proteopedia.org)
  • Monopartite, linear double-stranded DNA of 35-36kb encoding about 40 proteins. (expasy.org)
  • The excised DNA quadruplexes can bind to proteins such as DHX36 (a helicase), leading to formation of sub-organelles called stress granules. (uams.edu)
  • It has been indicated that the side effects could have been due to process-related impurities in the vaccines, such as host cell proteins [6] and DNA [5]. (biaseparations.com)
  • After process membrane and during S mitosis, FANCD2 dissociates to viral such others that cycle with proteins taken in molecular type trans-membrane, neutral as BRCA1 and RAD51. (erik-mill.de)
  • The LxCxE motif binds to all pocket proteins and is present in chromatin regulators such as HDAC and KDM5A and in viral proteins. (eu.org)
  • Recombinant DNA technology, an integral part of molecular cloning, has played a pivotal role in producing therapeutic proteins, developing vaccines, and advancing our understanding of gene function. (axis-shield-density-gradient-media.com)
  • In this study, the DNA probe is a double helix containing two complementary DNA strands that are engineered to bind weakly to each other: a "normal" strand, which is attached to the graphene transistor, and a "weak" strand, in which four the G's in the sequence were replaced with inosines to weaken its bond to the normal strand. (nanowerk.com)
  • DNA strands that have the perfectly matching complementary sequence to the normal strand-in other words, strands that contain the SNP-will bind to the normal strand and knock off the weak strand. (nanowerk.com)
  • To understand the interaction of ssDNA viruses with their hosts, it is important to characterize the dynamics of viral sense (VS) and complementary-sense (CS) viral strands during the infection process. (bvsalud.org)
  • Capsid deformation leads to displacement of water molecules hydrating the DNA and interhelical sliding, occurring with compression of the packaged DNA strands. (lu.se)
  • The chip is specifically engineered and fabricated to capture DNA (or RNA) molecules with the single nucleotide mutation-whenever these pieces of DNA (or RNA) bind to the probe, an electrical signal is produced. (nanowerk.com)
  • Large molecules are used commonly in modern gene therapy and vaccines products, and include virus particles, vesicles, RNA, plasmids, and other forms of DNA. (sartorius.com)
  • When a host cell is co-infected with two genetically distinct viruses, progeny viral particles with heterodimeric gRNAs would be produced. (biomedcentral.com)
  • Whether for vaccines or viral-vector therapies, NDV particles must meet certain criteria for yield, purity, and concentration. (biaseparations.com)
  • [ 17 ] Viral particles are shown to be carried to the CNS via B-lymphocytes in the setting of systemic dissemination. (medscape.com)
  • Assembly of progeny virions starts in cytoplasmic viral factories, producing a spherical immature particle. (wikipedia.org)
  • it is the only member of the family Asfaviridae , although it shares similarities with other virus families in the superfamily of nucleo-cytoplasmic large DNA viruses ( 2 - 4 ). (cdc.gov)
  • DNA-templated transcription is the method of transcription. (wikipedia.org)
  • Virus expression is low during early stages of mammary development, but high levels of MMTV transcription occur during lactation to ensure optimal viral transmission through maternal milk to the offspring. (utexas.edu)
  • This helicase is involved in many aspects of DNA metabolism ranging from telomere maintenance to transcription. (uams.edu)
  • Recombination occurs frequently during reverse transcription, and can lead to a combination of beneficial mutations, the loss of deleterious mutations, or new starting points for subsequent viral evolution [ 1 ]. (biomedcentral.com)
  • AP) activity structure, TLS is mismatched by the DNA mechanism transcription receptor( POLZ). (erik-mill.de)
  • The greater antiviral activity of acyclovir against HSV compared with VZV is due to its more efficient phosphorylation by the viral TK. (nih.gov)
  • New development in the modern biotechnology increased the need for plasmid DNA (pDNA) with sizes above 10 kbp (large pDNA), but their chromatographic purification is often challenging due to low process yields and column clogging. (biaseparations.com)
  • The cellular factor, CCAAT displacement protein (CDP), is a transcriptional repressor of MMTV. (utexas.edu)
  • CDP is proteolytically processed within the homeodomain by a cysteine protease to generate a dominantnegative CDP150 protein that interferes with the DNA-binding and repressor activities of CDP. (utexas.edu)
  • Furthermore, the loss of DNA-binding activity correlates with increased expression of MMTV and other mammary-specific genes, including β-casein, whey acidic protein and α-lactalbumin, indicating that CDP150 is a developmentally controlled, naturally occurring dominant-negative protein. (utexas.edu)
  • Disruption of the endosome by lytic protein VI releases the viral capsid in the cytosol. (expasy.org)
  • A second project involves the Hepatitis C viral helicase NS3 (Non-Structural Protein 3). (uams.edu)
  • It contains a linear double-stranded DNA encased in an icosahedral capsid that is surrounded by a viral envelope. (loinc.org)
  • We use atomic force microscopy (AFM) nano-indentation method to measure DNA mobility in the capsid. (lu.se)
  • The mobility of DNA packaged inside the HSV-1 capsid is measured by recording the force resisting the capsid indentation when the AFM tip is brought into contact with the DNA-filled capsid in solution. (lu.se)
  • Using AFM combined with ITC, we have recently shown that restricted intra-capsid DNA mobility can be characterized by a solid-like mechanical response to nano-indentation of a DNA-filled capsid. (lu.se)
  • At the same time, DNA packaged in the capsid can undergo a mechano-structural transition from a solid- to a fluid-like state. (lu.se)
  • Experimental infections of pigs confirmed that isolates obtained after introduction of ASF into Armenia and the Russian Federation cause acute disease and result in high mortality rates ( www.efsa.europa.eu/en/scdocs/scdoc/1556.htm ). (cdc.gov)
  • Previous studies have demonstrated varying grades of association between TTV DNA levels and immune deficiencies related to age, chronic infections and cancer. (prelekara.sk)
  • Alzheimer's disease (AD) has been related to persistent viral infections such as HSV-1 and CMV, but it is not known whether TTV viral load could serve as a functional biomarker of cellular immunity in this setting. (prelekara.sk)
  • Sachse M, Fernández de Castro I, Tenorio R, Risco C. Abstract Transmission electron microscopy (TEM) has been crucial to study viral infections. (csic.es)
  • This viral enzyme converts acyclovir into acyclovir monophosphate, a nucleotide analogue. (nih.gov)
  • due to the al-born ergothioneine of DNA, half E2F utilises transcriptional, and one I is stimulated still. (erik-mill.de)
  • Researchers say the technology could one day be used in various medical applications such as blood-based tests for early cancer screening, monitoring disease biomarkers and real-time detection of viral and microbial sequences. (nanowerk.com)
  • The advance was published June 13 in the online early edition of Proceedings of the National Academy of Sciences ( 'Highly specific SNP detection using 2D graphene electronics and DNA strand displacement' ). (nanowerk.com)
  • Researchers engineered the chip to generate an electrical signal when an SNP-containing strand binds to the probe, allowing for quick and easy SNP detection in a DNA sample. (nanowerk.com)
  • The use of a double stranded DNA probe in the technology developed by Lal's team is another improvement over other SNP detection methods, which typically use single stranded DNA probes. (nanowerk.com)
  • [ 1 ] It is a small non-enveloped double-stranded DNA virus that was identified as the etiological agent in 1967 and was named JC virus in 1971 after John Cunningham, from whom it was first isolated. (medscape.com)
  • When the excised DNA consists of specific sequences containing runs of guanine, the resulting DNA fragment can fold into a stable structure called quadruplex DNA. (uams.edu)
  • Telomeric DNA is particularly susceptible to oxidative stress and contains sequences that readily fold into quadruplex structures. (uams.edu)
  • This process allows researchers to amplify and study specific genes or DNA sequences of interest. (axis-shield-density-gradient-media.com)
  • The viral infection in oligodendrocytes is lytic. (medscape.com)
  • A perfect match DNA strand (green) binds to the normal strand (red) of the DNA probe and displaces the weak strand (black). (nanowerk.com)
  • A tRNA(3)-Lys binds to the primer-binding site (PBS) situated at the 5'-end of the viral RNA. (proteopedia.org)
  • Pif1 binds tightly to unusual DNA structures called quadruplexes, for which the biological functions are being intensively explored. (uams.edu)
  • Machón C Fàbrega-Ferrer M, Zhou D, Cuervo A, Carrascosa JL, Stuart DI, Coll M Abstract Herpesviridae is a vast family of enveloped DNA viruses that includes eight distinct human pathogens, responsible for diseases. (csic.es)
  • Now, the Barnes laboratory investigates viral-host interactions and translates knowledge of the structural correlates of antibody-mediated neutralization of viruses into the rational development of highly protective antibodies. (stanford.edu)
  • The kit contains all reagents necessary for DNA library construction, including QIAseq Unique Dual-Index Y-Adapters and QIAseq Beads for reaction cleanup. (qiagen.com)
  • 40 copies/ml) or undetectable viral load were recruited from two clinic-based cohorts in San Francisco (the PLUS study and the SCOPE cohort). (ucsf.edu)
  • TTV viral load was analyzed in plasma samples using a quantitative real-time PCR. (prelekara.sk)
  • Genomes are linear, double stranded DNA, and are relatively small (between 16-20 kbp)-hence the term pico-virinae. (wikipedia.org)
  • Genetically encoding DNA nanostructures provides a route for their production as well as applications in living cells. (nature.com)
  • HIV gene products, such as Tat, may be able to transactivate the JC viral promoter directly. (medscape.com)
  • No. 63/298,867, filed Jan. 12, 2022, entitled "CASCADE OLIGONUCLEOTIDE DISPLACEMENT PROBES," the entire contents of which are incorporated herein by reference. (justia.com)
  • Schematic of DNA strand displacement on the biosensor chip. (nanowerk.com)
  • Schematic picture of a hexagonal phase with anionic DNA and rodlike cationic CTA micelles which are distorted to reduce the electrostatic free energy. (lu.se)
  • Direct Colony Sequencing is also extremely effective when low amounts of DNA starting material are available (e.g. low copy plasmids). (genewiz.com)
  • Metagenomes can now be generated from nanogram to subnanogram amounts of DNA. (peerj.com)
  • We are studying a DNA helicase from Bacteriophage T4 called Dda (for DNA-Dependent-ATPase) in order to develop a detailed chemical and kinetic mechanism for DNA unwinding by this model DNA helicase. (uams.edu)
  • In a new project, we have recently discovered a possible signaling mechanism by which cells respond to DNA damage. (uams.edu)
  • Hence, this mechanism provides a stepwise chemical mechanism for the cell to respond to DNA damage leading to changes in translation. (uams.edu)
  • 4. Haloschan M, Bettesch R, Gorzer I, Weseslindtner L, Kundi M, Puchhammer-Stockl E. TTV DNA plasma load and its association with age, gender, and HCMV IgG serostatus in healthy adults. (prelekara.sk)
  • Prevalence of HIV drug resistance in Nigeria: results from a cross-sectional, population-based survey of Nigerian adults with unsuppressed viral load. (cdc.gov)
  • After it is a structure zero to unique model binding, POLI has ventricular to morphologically heter-oligomerize the DNA cleavage further. (erik-mill.de)
  • The field of DNA nanotechnology has harnessed the programmability of DNA base pairing to direct single-stranded DNAs (ssDNAs) to assemble into desired 3D structures. (nature.com)
  • Either the host or phage DNA ligase can effect the final covalent joining. (neb.com)
  • Its impact on fields like forensics, medicine, and biotechnology is profound, enabling the study of genetic variations, identification of pathogens, and production of ample DNA for analysis. (axis-shield-density-gradient-media.com)
  • The possibility of viral resistance to acyclovir should be considered in patients who show poor clinical response during therapy. (nih.gov)
  • The porous magnetic Fe3O4 NPs displayed favorable loading capacity for CdS QDs and easy biofunctionalization by negatively charged capture DNA (cDNA). (bvsalud.org)
  • However, the desired nucleotides must be incorporated into a long DNA with complex secondary structure from which they would need to be cleaved as a second step. (nature.com)
  • The biosensor chip -- consisting of a double stranded DNA probe embedded onto a graphene transistor -- electronically detects DNA SNPs. (nanowerk.com)
  • The chip consists of a DNA probe embedded onto a graphene field effect transistor. (nanowerk.com)
  • The DNA probe is an engineered piece of double stranded DNA that contains a sequence coding for a specific type of SNP. (nanowerk.com)
  • Researchers pointed out that a novel feature of their chip is that the DNA probe is attached to a graphene transistor, which enables the chip to run electronically. (nanowerk.com)
  • Helicases are enzymes that manipulate DNA and RNA in all aspects of nucleic acid metabolism. (uams.edu)
  • This is the first example of combining dynamic DNA nanotechnology with high resolution electronic sensing. (nanowerk.com)
  • During oxidative stress, guanine residues are oxidized, leading to excision of the damaged DNA. (uams.edu)
  • The FA guanine is unfolded by growth and displacement of FANCD2 and FANCI. (erik-mill.de)
  • Urine specimens were processed, stored and shipped to the Division of STD Prevention Laboratory, National Center for HIV/AIDS, Viral Hepatitis, STD and TB Prevention, Centers for Disease Control and Prevention for analysis. (cdc.gov)
  • QIAseq Single Cell DNA Library Kits UDI are intended for molecular biology applications. (qiagen.com)
  • The QIAseq Single Cell DNA Library Kit UDI can support up to 384 samples in a single flow-cell lane, increasing sample throughput and lowering sequencing costs. (qiagen.com)
  • This constitutes our approach for analyzing intracapsid DNA mobility at a single-particle level. (lu.se)
  • Attachment of the viral fiber glycoproteins to host receptors mediates endocytosis of the virus into the host cell and fiber shedding. (expasy.org)