• The assembly is currently being partially annotated, focusing particularly on genes involved in degradation of recalcitrant aromatic compounds. (hi.is)
  • Gaining deeper insight into lignin degradation, identification of bacteria and their functional genes involved in lignin degradation. (und.edu)
  • Therefore, we propose a thorough investigation of bacterial degradation of lignin, including the identification of taxa involved as well as their functional genes. (und.edu)
  • Given the structural similarity of lignin degradation intermediates to known substrates of aromatic ring-hydroxylating dioxygenases, biodegradative taxa can be expected to be involved in lignin degradation. (und.edu)
  • Although wood-rotting fungi are generally considered to be the only group of microorganisms capable of complete lignin mineralization [1], bacterial degradation of lignin and its constituents has been the subject of much less research [2, 3] than fungal degradation. (und.edu)
  • Future work including shotgun metagenomic analysis would help confirm the presence of specific degradation genes. (duke.edu)
  • Auxiliary activity (AA) enzymes are produced by numerous bacterial and fungal species to assist in the degradation of biomass. (biomedcentral.com)
  • WF1 was able to degrade the polycyclic aromatic hydrocarbon phenanthrene, each when alone and when in co-culture with the fungal species Phanerochaete chrysosporium. (wikipedia.org)
  • strain HPD-2 on the soil microbe al community and removal of polycyclic aromatic hydrocarbons from an aged contaminated soil. (unhas.ac.id)
  • Number of free drug concentrations in the, absolute stereochemistry of this reasoning the reviewed and revised at every contact with specialist drug services in the mucosal 7 drug-cytokine interactions 261 polycyclic aromatic inspection ot its epoxidation of the ex-factory price). (stonecottagegardens.com)
  • 2021. Computational identification of potential inhibitory compounds in Indian medicinal and aromatic plant species against major pathogenicity determinants of SARS-CoV-2. (edu.in)
  • Several fungal species have been used as experimental organisms for decades. (databasefootball.com)
  • On the negative side there are many fungal species that cause plant diseases and pose a high threat by crop loss, however some members of this fungal family also act as biocontrol agents in preventing the pathogenic members. (databasefootball.com)
  • Chemotypes are a phenomena of nature when plants from the same genus and species produce different aromatic molecules. (tarasherbs.com)
  • Linalool is a monoterpene compound commonly found as a major component of the essential oils of several aromatic plant species, many of which are used in traditional medical systems as analgesic and anti-inflammatory remedies. (researchgate.net)
  • A new class of phenolic phytoalexins with antimicrobial activities against bacterial and fungal pathogens in rice comprises stress-induced phenylamides, which rely on the shikimate pathway for aromatic L-amino acids and the phenylpropanoid pathway for the phenolic acid moieties in phenylamides and sakuranetin [ 6 ]. (researchsquare.com)
  • 2021.Transcriptome profiling reveal key hub genes in co-expression networks involved in Iridoid glycosides biosynthetic machinery in Picrorhiza kurroa. (edu.in)
  • To achieve this, PCR was used to identify the polyhydroxyalkanoate biosynthetic genes in B. cereus SPV. (westminster.ac.uk)
  • Conclusion: Sequence analysis of the PCR products from B. cereus SPV revealed the sequence of the putative biosynthetic genes, and possible regions involved in substrate binding. (westminster.ac.uk)
  • The biosynthetic gene clusters of these linaridins lack obvious candidate genes for the dehydratase and epimerase required to introduce dehydrobutyrine and D-amino acid residues, respectively. (hokudai.ac.jp)
  • However, we previously demonstrated that the grisemycin (grm) cluster contained cryptic dehydratase and epimerase genes by heterologous expression of this biosynthetic gene cluster in Streptomyces lividans and proposed that two genes (grmH and grmL) with unknown functions catalyze dehydration and epimerization reactions. (hokudai.ac.jp)
  • Diazo-positive metabolites in urine from workers exposed to aromatic nitro-amino compounds. (cdc.gov)
  • soft coral led to the isolation of two new aromatic A-ring steroids (1-2), together with three known compounds (3-5). (medworm.com)
  • When yeast grows it consumes sugars and turns them into alcohol, carbon dioxide and a range of what are called aromatic compounds. (thenakedscientists.com)
  • To find out, researchers in Belgium have been genetically modifying yeasts, turning on and off the genes responsible for making these compounds, to investigate what they do. (thenakedscientists.com)
  • One yeast was producing way more of this aroma compounds because we genetically modified it so that we over activate the aroma gene. (thenakedscientists.com)
  • Phenolic compounds generally possess one or more aromatic rings with one or more hydroxyl groups. (scialert.net)
  • 2021. Complexity of gene paralogues resolved inbiosynthetic pathway of hepatoprotective iridoid glycosides in a medicinal herb, Picrorhiza kurroathrough differential NGS transcriptomes. (edu.in)
  • Diverse organization of genes of the β-ketoadipate pathway in members of the marine Roseobacter lineage. (microbiologyresearch.org)
  • Amity has identified several potential fungal bioagents'the core component' against insect pests, pathogenic fungi and root-knot nematode causing serious plant diseases. (amity.edu)
  • A substance used to destroy fungal pests. (mcw.edu)
  • Analysis of Massilia genomes has identified genes for producing auxins, plant hormones, which can promote or alter plant growth. (wikipedia.org)
  • LPMO genes are abundant in both fungal and bacterial genomes, and multiple genes are often present in fungal genomes. (biomedcentral.com)
  • One-third of the 471 genes predicted to encode transcription factors are differentially expressed during sexual development of S. commune . (nature.com)
  • In this work, we show that PcaQ also regulates the expression of the S. meliloti smb20568-smb20787-smb20786-smb20785-smb20784 gene cluster, which is predicted to encode an ABC transport system. (microbiologyresearch.org)
  • To investigate this transport system further, we generated a pcaM deletion mutant (predicted to encode the substrate-binding protein) and introduced a polar insertion mutation into pcaN , a gene that is predicted to encode a permease. (microbiologyresearch.org)
  • As many as thirty percent of genes associated with human diseases have similar copies in fungi making it possible to understand important human genes using experimental fungal organisms. (databasefootball.com)
  • Supercharging SIP in the Fungal Hyphosphere Applying high-throughput stable isotope probing to the study of a particular fungi, researchers identified novel interactions between bacteria and the fungi. (doe.gov)
  • Here we sought to examine the fungal microbiome (mycobiome) at a model creosote polluted site to determine if fungi were prevalent under high PAH contamination conditions as well as to identify potential mycostimulation targets. (duke.edu)
  • Neurospora crassa, a fungus harnessed from an outbreak in French bakeries, was first used in genetics research in 1941 to detail the relationship between genes and enzymes. (databasefootball.com)
  • Examples of such enzymes are: catalase HP I from Escherichia coli (gene katG) and perA from Bacillus stearothermophilus. (expasy.org)
  • The specific molecules produced by each plant are determined by genes and enzymes. (tarasherbs.com)
  • Some of them play a role in cell-suberization by catalyzing the deposition of the aromatic residues of suberin on the cell wall, some are expressed as a defense response toward wounding, others are involved in the metabolism of auxin and the biosynthesis of lignin. (expasy.org)
  • This high EPSPS copy number enables the plant to produce adequate EPSPS to support required aromatic amino acid production even when high levels of glyphosate are present in plant tissues. (scirp.org)
  • Molecular characterization studies have been conducted 16S rRNA gene micro symbiont of sponge origin Melawai Beach, Balikpapan in East Kalimantan. (unhas.ac.id)
  • The research method that morphological identification, isolation-purification and molecular characterization of the 16S rRNA gene with Chain Reaction Polymerization method. (unhas.ac.id)
  • Analysis of potensial and molecular characterization of 16S rRNA gene of isolation cellulolytic bacteria from Eucheuma sp. (unhas.ac.id)
  • To this end, we made use of both culturing and the culture-independent methods of PCR followed by denaturing gradient gel electrophoresis (PCR-DGGE) and pyrosequencing of 16S rRNA gene amplicons. (who.int)
  • Two genes from Streptomyces albidoflavus , one exochitinase (905-bp) and an endochitinase (1100-bp) were functionally expressed in Escherichia coli in form of a fusion protein with a maltose binding protein (MBP). (springeropen.com)
  • Since the discovery of penicillin, an antibiotic of fungal origin, substantial efforts have been devoted globally to search for fungal-derived natural bioactive products. (medworm.com)
  • 2008). The combination of pH and temperature for optimum growth can differently affect each fungal strain and has practical significance for the understanding of fungal physiology (Snajdr and Baldrian 2007). (ncsu.edu)
  • Use of differential fluorescence induction and optical trapping to isolate environmentally induced genes. (microbiologyresearch.org)
  • RIViT-seq technology could speed up associating transcription factors with their target genes. (doe.gov)
  • Curcuma aromatic or wild turmeric is a member of genus Curcuma. (dittlau.se)
  • In all other the topical corticosteroids low potency: Application site: Caution in active viral, fungal, parasitic hydrocortisone irritation (due to altered intesti- nal, hepatic, and/or renal cyp metabolism and/or drug efflux or brain drug hepatic drug metabolism 41)7. (stonecottagegardens.com)
  • 2007. Maternal nutrient restriction in early pregnancy programmes hepatic mRNA expression of growth related genes and liver size in adult male sheep . (hutton.ac.uk)
  • Comparative analyses of its 38.5-megabase genome, which encodes 13,210 predicted genes, reveal the species's unique wood-degrading machinery. (nature.com)
  • Objective analysis of histomorphological research, isolation-purification, molecular characterization of micro-symbiont genes in order to search symbiont bacteria that can live in extreme environments contaminated hydrocarbon waste. (unhas.ac.id)
  • At the molecular modeling software was driven by gene code for heavy-chain variable (vh) regions. (stonecottagegardens.com)
  • This was the fungus used in the above-mentioned experiment where researchers replaced yeast genes with human genes . (databasefootball.com)
  • Many genes were found to be involved in the trait, meaning it is genetically complex, though the researchers flag up one gene in particular, called ZmRtn16. (gmwatch.org)
  • a mechanism by which bacteria alter their gene expression in response to the population density. (wikipedia.org)
  • Christofer Osbecks 2019 "Exploring gene expression responses of marine bacteria to environmental factors" Linnaeus University (Sweden). (plymouth.ac.uk)
  • 2013. Regulation of RNA-dependent RNA polymerase 1 and isochorismate synthase gene expression in arabidopsis . (hutton.ac.uk)
  • Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. (uu.nl)
  • Streamlining Regulon Identification in Bacteria Regulons are a group of genes that can be turned on or off by the same regulatory protein. (doe.gov)
  • NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. (uu.nl)
  • The gene with 5 kb flanks (if sufficient flanking sequence is available). (uu.nl)
  • This is an example of a complex trait (drought tolerance) with many gene functions at its basis, meaning that it is beyond what genetic modification can accomplish. (gmwatch.org)
  • Fungal cells are similar to human cells in that they have nuclei and other organelles to process energy, but lack chlorophyll or chloroplasts (the photosynthetic structures) as found in plants. (databasefootball.com)
  • Chemotypes: The aromatic oils found in plants are built from three basic elements: carbon, hydrogen and oxygen. (tarasherbs.com)
  • Evaluation of solid sorbents for sampling aliphatic and aromatic nitrocompounds in work-room air. (cdc.gov)
  • In fact, a major project replaced almost 500 individual fungal genes with their human equivalents and nearly half of the replacements resulted in the yeast being "just fine" . (databasefootball.com)
  • There were nearly three times more positive correlations as compared to negative correlations, suggesting that creosote-tolerance is more common than creosote-sensitivity in the fungal community. (duke.edu)
  • Fungal Cell Biology Group (Nick Read lab at U. Edinburgh) Gero Steinberg lab at U. Exeter. (stradanove.net)
  • It has commonly been assumed that the anti-oxidant capacity of phenolics will increase with the number of free hydroxyls and conjugation of side chains to the aromatic rings 11 . (scialert.net)
  • Early Blight - Fungal leaf spot disease favored by wet conditions. (tomatoanswers.com)