• data
  • Discussions focused on computing research challenges in data center efficiency and sustainability as well as computational issues related to reducing our carbon footprint. (microsoft.com)
  • When hits are evaluated after a search, global positions are mapped into documents and local positions with some algorithm and/or data structure, such as a binary search in the starting/ending positions of the documents. (wikipedia.org)
  • An alternate representation is a suffix array, which is considered to require less virtual memory and supports data compression such as the BWT algorithm. (wikipedia.org)
  • This algorithm parallelizes poorly, due to a large number of data dependencies. (wikipedia.org)
  • Srinivas Aluru is a professor in the School of Computational Science and Engineering at Georgia Institute of Technology, and co-Executive Director for the Georgia Tech Interdisciplinary Research Institute in Data Engineering and Science. (wikipedia.org)
  • Sequence Alignment
  • The footprints of Landau's research can be found in almost every subarea of string algorithms, including his foundational work on dynamic programming algorithms for the edit distance problem, his numerous papers on modeling digitized images and 2D matching, incremental sequence alignment, and recently, his work on jumbled pattern matching and compressed text algorithms. (wikipedia.org)
  • Techniques
  • He was instrumental in the application of pattern matching techniques to the area of computational biology, working on problems in several diverse areas such as DNA and RNA comparison, clustering, haplotype inference, protein secondary structure prediction, and tandem repeats. (wikipedia.org)
  • Computer Science
  • Gad Menahem Landau (born 1954) is an Israeli computer scientist noted for his contributions to combinatorial pattern matching and string algorithms and is the founding department chair of the Computer Science Department at the University of Haifa. (wikipedia.org)
  • Machine Learning
  • Some mathematical maturity is expected, and a basic course in linear algebra and machine learning (equivalend to TDA 231 Algorithms for Machine Learning & Inference or FFR135 Artificial Neural Networks ) are required before taking this course. (chalmers.se)
  • edit distance
  • T[yis a substring of T with the minimal edit distance to the pattern P. Computing the E(x, y) array takes O(mn) time with the dynamic programming algorithm, while the backwards-working phase takes O(n + m) time. (wikipedia.org)
  • Essentially, tree alignment is an algorithm for optimizing phylogenetic tree by calculating the edit distance to achieve the minimum value. (wikipedia.org)
  • include
  • Possible modifications to this algorithm include: We can adapt the algorithm to use less space, O(m) instead of O(mn), since it only requires that the previous row and current row be stored at any one time. (wikipedia.org)
  • Journal
  • He serves on the editorial board of Journal of Discrete Algorithms, and served as a guest editor for TCS and Discrete Applied Mathematics. (wikipedia.org)
  • School
  • Boguski earned his M.D., Ph.D. from Washington University School of Medicine and Division of Biology and Biomedical Sciences. (wikipedia.org)
  • uses
  • Tree alignment problem is a NP-hard problem when we restrict its scoring mode and alphabet size, and it can be found an algorithm, which uses to find the optimized solution. (wikipedia.org)