Physiol genes plant. Medical search. Frequent questions

Functional conservation of plant secondary metabolic enzymes revealed by complementation of Arabidopsis flavonoid mutants with maize genes" (PDF). (wikipedia.org)
Dou H, Xv K, Meng Q, Li G, Yang X (2015) Potato plants ectopically expressing Arabidopsis thaliana CBF3 exhibit enhanced tolerance to high-temperature stress. (springer.com)
These 77 genes were then divided into eleven subfamilies according to their homology with Arabidopsis thaliana . (biomedcentral.com)
2005) Expression of Arabidopsis MIRNA Genes. (ttu.edu)
2004) Evolution of microRNA genes by inverted duplication of target gene sequences in Arabidopsis thaliana . (ttu.edu)
We characterize early patterning during de novo development of the Arabidopsis shoot meristem using fluorescent reporters of known gene and protein activities required for shoot meristem development and maintenance. (biologists.com)
FAD2 was first identified in the model plant species Arabidopsis thaliana [2]. (researchsquare.com)
The Arabidopsis thaliana Niederzenz-1 genome sequence was recently published with an ab initio gene prediction. (biomedcentral.com)
Mehterov N , Balazadeh S, Hille J, Toneva V, Mueller-Roeber B, Gechev T. Oxidative stress provokes distinct transcriptional responses in the stress-tolerant atr7 and stress-sensitive loh2 Arabidopsis thaliana mutants as revealed by multi-parallel quantitative real-time PCR analysis of ROS marker and antioxidant genes. (rug.nl)
Characterization of genes involved in the regulation of programmed cell death in Arabidopsis thaliana . (rug.nl)
A member of the KNOTTED class of homeodomain proteins encoded by the STM gene of Arabidopsis. (grassius.org)

CAMTAs participate in gene expression regulation by binding to the cis -elements in the promoter regions of numerous target genes. (frontiersin.org)
Important regulatory factors, TFs bind to the promoter regions of target genes and activate or inhibit their transcription. (biomedcentral.com)
We are working on a toolbox of deep learning algorithms that can elucidate predictive relationships between sequence of non-coding gene regulatory elements, protein-DNA binding events, and expression patterns of their target genes. (ipk-gatersleben.de)
Finally, we used gene knockout strains to validate the potential target genes related to ethanol tolerance. (biomedcentral.com)
The presence of a homeodomain (HD), which comprises 60 amino acids, makes a three-helix tertiary structure, that binds the promoter regions of specific target genes (Sharif et al. (grassius.org)
The silencing potential of the mycorrhiza-PEBV-VIGS protocol was evaluated using two target genes PsSym19 and PsPT4 , with known mutant phenotypes. (biomedcentral.com)

In maize, phlobaphenes are synthesized in the flavonoids synthetic pathway from polymerisation of flavan-4-ols which encodes an R2R3 myb-like transcriptional activator of the A1 gene encoding for the dihydroflavonol 4-reductase (reducing dihydroflavonols into flavan-4-ols) while another gene (Suppressor of Pericarp Pigmentation 1 or SPP1) acts as a suppressor. (wikipedia.org)
Ruby is a MYB transcriptional activator of genes that produce anthocyanin in citrus fruits. (wikipedia.org)
Mutants defective in H3K27m3 and H3K18ac modifications showed that both modifications are required to determine the normal transcriptional kinetics of these genes upon stress stimuli. (biorxiv.org)
Present work thus suggests that sucrose might be acting as an enhancer of transcriptional trigger to the genes of steviol glycoside biosynthesis pathway that could positively manipulate the production of steviol glycosides. (scialert.net)
Xie Z ., Cheng H. (2017) Interplay and transition between small RNA-directed posttranscriptional and transcriptional gene silencing in plants. (ttu.edu)
Mishra K. K. and Handa A.K. (2005) Meiotic reestablishment of post-transcriptional gene silencing is regulated by aberrant RNA formation in tomato (Lycopersicon esculentum cv. (purdue.edu)

In sorghum, the corresponding yellow seed 1 gene (y1) also encodes a R2R3 type of Myb domain protein that regulates the expression of chalcone synthase, chalcone isomerase and dihydroflavonol reductase genes required for the biosynthesis of 3-deoxyflavonoids. (wikipedia.org)
Compared to the wild-type plants , the CRISPR /Cas9-mediated SlKED knockout plants did not exhibit altered expression patterns for genes involved in hormone biosynthesis or stress signaling, suggesting a lack of pleiotropic effect on other stress-responsive genes . (bvsalud.org)
Using camalexin biosynthesis genes as an example, we confirmed that these two modifications were co-localized to form bivalent chromatin. (biorxiv.org)
Genes responsible for the biosynthesis of these compounds are wired into a complex network. (biorxiv.org)
In present study, we analyzed the effect of varying sucrose (1, 3 and 5%) concentrations on the genes involved in steviol glycoside biosynthesis pathway and content of steviol glycosides. (scialert.net)
Presence of two functional copies of these genes has suggested their efficient role in steviol glycoside biosynthesis pathway as well. (scialert.net)
Genes coding for defense-related transcription activators, reactive oxygen species metabolism, terpene biosynthesis, and energy conversion pathways were upregulated in inoculated samples of L. dendroidea , indicating an integrated defensive system in seaweeds. (asm.org)
In higher plants, FAD2 gene encodes the microsomal oleate Δ12-desaturase, one of the key enzymes essential for biosynthesis of polyunsaturated lipids that serve many important functions in plant development and stress responses. (researchsquare.com)
Haplotypes within a set of 17 starch biosynthesis/degradation genes were defined, and a particularly high level of haplotype variation was uncovered in the genes encoding sucrose synthase (types I and II) and starch synthase. (biomedcentral.com)
The high level of haplotype variation among starch biosynthesis/degradation genes in the progenitors of cultivated barley shows that domestication and breeding have greatly eroded their allelic diversity in current elite cultivars. (biomedcentral.com)
We report haplotyping data for 17 starch biosynthesis/degradation genes demonstrating the broad diversity among H. spontaneum accessions and H. vulgare landraces but rather limited genetic variance in the current elite breeding germplasm by fixing certain haplotypes. (biomedcentral.com)

Metabolism underpins development and physiology, but little is known about how metabolic genes and pathways are regulated, especially in multicellular organisms. (biorxiv.org)
they can combine with the promoter regions of key genes in signaling pathways to regulate their transcription levels and, in turn, plant resistance to stress. (biomedcentral.com)
Research in my laboratory is directed to understand how multiple small RNA pathways operate in plants using genetic, genomic, and biochemical approaches. (ttu.edu)
Plants, therefore, provide a unique system to study the genetic diversification and functional adaptation of small RNA pathways. (ttu.edu)
Xie Z , and Qi X. (2008) Diverse small RNA-directed silencing pathways in plants. (ttu.edu)
2004) Genetic and functional diversification of small RNA pathways in plants. (ttu.edu)
Transcriptomic changes in L. dendroidea in the presence of V. madracius include the upregulation of genes that participate in signaling pathways described here for the first time as a response of seaweeds to microbes. (asm.org)

High transformation efficiency of citrus is of great importance for large scale characterization of gene functions and also cultivar development via transgenic and genome editing technologies. (springer.com)
Molecular characterization and gene expression of lhcb5 gene encoding CP26 in the light-harvesting complex II of Chlamydomonas reinhardtii. (bio.net)
We reported the molecular characterization of the cotton (Gossypium hirsutum) GhFAD2 gene family and the essential role of GhFAD2-3 in cotton anther development. (researchsquare.com)
Cloning and functional characterization of a gene for capsanthin-capsorubin synthase from tiger lily (Lilium lancifolium Thunb. (oregonstate.edu)

Because the environment encountered within a living host will be quite different from the external environment, pathogens must be able to regulate the necessary genes in coordination as they move from the environment to the host and from one host niche to another. (cdc.gov)
The Goal of research is to characterize the molecular mechanisms, including identifying genes, which regulate biological processes in crops that effect agronomical performance, postharvest quality and shelf life and yield of processed products made from fruit crops. (purdue.edu)

DRB2 has been remarkably conserved throughout plant evolution, raising the possibility that translational repression is the ancient form of miRNA-directed gene regulation in plants, and that Dicer partnering proteins, such as human TRBP, might play a similar role in other eukaryotic systems. (nature.com)
The microarray analysis of drb2 also revealed a large set of gene transcripts that were significantly different from wild-type levels, but which are not thought to be the primary targets of miRNA-directed regulation ( Supplementary Fig. 3 ). (nature.com)
Notably, a large number of stress-related elements present in the promoter regions of some ZmCAMTA genes, indicating a genetic basis of stress expression regulation of these genes. (frontiersin.org)
Chaves MM, Flexas J, Pinheiro C (2009) Photosynthesis under drought and salt stress: regulation mechanisms from whole plant to cell. (springer.com)
The authors also provide a description of plant gene expression regulation features that evidence some known and other novel correlations. (plantae.org)
Various levels of regulation, including epigenetic modifications and transcription factors, play important roles in coordinating the expression of genes. (biorxiv.org)
Xie Z , Khanna K, Ruan S. (2010) Expression of MicroRNAs and Its Regulation in Plants. (ttu.edu)
Selected Recent refereed publications Faltin Z, Holland D, Velcheva M, Tsapovetsky M, Roeckel-Drevet P, Handa AK, Abu-Abied M, Friedman-Einat M, Eshdat Y, Perl A. (2010) Glutathione peroxidase regulation of reactive oxygen species level is crucial for in vitro plant differentiation. (purdue.edu)
Alternative mRNA variants and regulation: The gene contains 29 different introns (28 gt-ag, 1 gc-ag). (blogspot.com)

The maize P gene encodes a Myb homolog that recognizes the sequence CCWACC, in sharp contrast with the YAACGG bound by vertebrate Myb proteins. (wikipedia.org)
Interestingly, unlike many animals, plants encode multiple DCL and RDR proteins. (ttu.edu)
Since the discovery of the Kn1 gene, a large number of transcription factor (TF) genes encoding proteins with homeodomains have been found in all plants and there are about 135 family members in maize. (grassius.org)
The main aim of our research is to understand the molecular details and physiological roles of the multitude of water channel-like proteins present in plants and animals. (lu.se)
Annotation of Selaginella moellendorffii major intrinsic proteins and the evolution of the protein family in terrestrial plants. (lu.se)

Another challenge to using transgenic plant technology in citrus is the long juvenile phase of immature tissues that ranges from 5 to 20 years, which greatly delays analysis of the effects of candidate genes. (springer.com)
Integrated multi-omics analyses and genome-wide association studies reveal prime candidate genes of metabolic and vegetative growth variation in canola. (ipk-gatersleben.de)

The expression of photosynthesis and chlorophyll synthesis related genes were significantly reduced under both types of stresses, which limit the metabolic processes and thus help prolong survival under extreme conditions. (frontiersin.org)
Surprisingly, specialized metabolic genes, often involved in defense, were predominantly regulated by two modifications that have opposite effects on gene expression, H3K27me3 (repression) and H3K18ac (activation). (biorxiv.org)
To see if there are any interactions between epigenetic modifications across metabolic genes, we computed pairwise Pearson's correlation coefficients between the 16 epigenetic modifications based on their relative abundance at each metabolic gene region. (biorxiv.org)
Enrichment of modifications in each metabolic domain, relative to all the genes in the genome, revealed both shared and diverse patterns. (biorxiv.org)
In contrast, metabolic genes involved in specialized and hormone metabolic domains, which are generally involved in interactions with biotic and abiotic environmental stimuli, showed distinct patterns with the enrichment of a repression mark H3K27me3 and an activation mark H3K18ac ( Fig. 1B ). (biorxiv.org)
A. Correlation analysis reveals four groups of epigenetic marks, activating (red) and repressing (blue), based on their relative abundance on metabolic genes. (biorxiv.org)
Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses revealed that the candidate reference genes were significantly enriched in cellular metabolic process, protein metabolic process and ribosome in early development and normal adult tissues as well as in cellular localization and endocytosis in the hindgut under sulfide stress. (biomedcentral.com)
Hendrawati O, Woerdenbag HJ, Hille J, Kayser O. Metabolic engineering of medicinal plants and microorganisms for the production of natural products. (rug.nl)

In this study, we first identified all the CAMTA homologous genes in the whole genome of maize. (frontiersin.org)
Furthermore, the expression pattern of ZmCAMTA genes under RBSDV infection was analyzed to investigate their potential roles in responses of different maize cultivated varieties to RBSDV. (frontiersin.org)
The effects of a maize knotted1 ( kn1) gene under the control of the cauliflower mosaic virus 35S promoter on genetic transformation efficiencies of six citrus genotypes were tested. (springer.com)
The maize homeobox gene knotted1 ( kn1 ) encodes an AP2/ERF transcription factor (Hake et al. (springer.com)
Genetic analysis of plant architecture has led to the discovery of key genes that function in meristems, including the maize ( Zea mays ) transcription factor knotted1 ( kn1 ), the founding member of the kn1 homeobox ( knox ) gene family (Vollbrecht et al. (grassius.org)
1991). The maize Kn1 gene was found to encode a homeodomain-containing protein, the first identified in the plant kingdom. (grassius.org)
In maize a total of 21 ZHD genes with different physicochemical properties were found distributed on nine chromosomes in maize (Islam et al. (grassius.org)
Vollbrecht E, Veit B, Sinha N, Hake S. The developmental gene Knotted-1 is a member of a maize homeobox gene family. (grassius.org)
Bolduc N, Tyers RG, Freeling M, Hake S. Unequal redundancy in maize knotted1 homeobox genes. (grassius.org)
Miao X, Zhu W, Jin Q, Song Z, Li L. ZmHOX32 is related to photosynthesis and likely functions in plant architecture of maize. (grassius.org)

My colleague is very knowledgeable about the genes for the major subunits of eukaryotic RNA polymerase since it was his lab that cloned the first one. (blogspot.com)
Eukaryotic genes are transcribed as a primary transcript that is subsequently converted to a mature mRNA through several processing steps including splicing. (biomedcentral.com)

This study highlights a role for GABA metabolism in fine tuning physiology and opens alternative avenues for improving plant stress resilience. (nature.com)
The discovery that the activity of aluminium-activated malate transporters (ALMTs) can be regulated by GABA 18 represents a plausible mechanism by which GABA signals could be transduced in plants, providing a putative-but unproven-novel signalling link between primary metabolism and physiology 19 . (nature.com)
Drought is one of the most serious abiotic stress factors which occur throughout the development of the plant and, if sufficiently severe and/or prolonged, results in the modification of the plant's physiology and severely limit crop productivity. (biomedcentral.com)
Plant and Cell Physiology 2007, 48 (8):1132-1147. (lu.se)

Plants contain a MYB-protein subfamily that is characterised by the R2R3-type MYB domain. (wikipedia.org)
Here we show that the form of regulatory action directed by a plant miRNA is determined by DRB2, a DICER-LIKE1 (DCL1) partnering protein. (nature.com)
A second group of methods, which includes DNA microarrays and proteomics, have advantages that overcome the limitations implicit in signature-tagged mutagenesis and in vivo expression technology, namely, the ability to directly measure expression (gene or protein) levels on a true genome-wide scale, but their application to analysis of bacterial pathogens during real infections is still in its infancy. (cdc.gov)
The wounding-responsive KED gene , named for its coding for a lysine (K), glutamic acid (E), and aspartic acid (D)-rich protein , is widely present among land plants . (bvsalud.org)
Role of swollenin, an expansin-like protein from Trichoderma , in plant root colonization. (microbiologyresearch.org)
In higher plants, the microsomal oleate Δ12 -desaturase (fatty acid desaturase 2, FAD2) is a hydrophobic endoplasmic reticulum protein, catalyzing the reaction from monounsaturated oleic acid (C18:1) to polyunsaturated linoleic acid (C18:2) by introducing a double bond between the 12th and 13th carbon atoms of C18:1 [1]. (researchsquare.com)
Ramakrishna W., Deng Z., Ding C.-K, Handa A. K., Ozminkowski Jr R. H. (2003) A novel small heat shock protein gene, vis1, contributes to pectin depolymerization and juice viscosity in tomato fruit. (purdue.edu)
It makes no sense that conserved genes would be producing alternative protein variants that are species specific. (blogspot.com)
He is firmly convinced that most human genes express a number of different protein products that are produced as the result of alternatively spliced mRNA precursors. (blogspot.com)

The independent research group Meiosis (ME) primarily funded by the European Research Council (project MEIOBARMIX) is interested in the process of plant meiosis that generates genetic variation through homologous recombination. (ipk-gatersleben.de)
Inserting a fragment of a plant gene into a virus vector will result in a recombinant virus that triggers degradation of both the virus transcript and of homologous endogenous plant RNA sequences. (biomedcentral.com)

The results showed that ethanol exposure induced genes involved in common stress responses, transporting and cell envelope modification. (biomedcentral.com)

Figure 1: Expression patterns of DRB1 and DRB2 in wild-type plants, and miRNA target expression in drb1 and drb2 . (nature.com)
The results showed that nine ZmCAMTA genes showed highly diversified gene structures and tissue-specific expression patterns. (frontiersin.org)
The expression patterns of drought regulated genes were monitored during plant ontogeny, mapped and the location of these genes was incorporated into a comprehensive barley SNP linkage map. (biomedcentral.com)

Homeobox domain genes are mainly involved in controlling the growth and developmental processes such as transition through phases in an organism by encoding a certain transcription factor. (grassius.org)

In contrast, the selection of regulatory mechanisms is independent of the degree of mismatch between a plant miRNA and its target transcript 5 . (nature.com)
However, the components and mechanism(s) that determine whether a plant miRNA ultimately regulates its targets by guiding cleavage or translational inhibition are unknown 6 . (nature.com)
These small RNAs, which include microRNA (miRNA) and several classes of small interfering RNAs (siRNA), play important roles in regulating gene expression, heterochromatin formation, and defense against invading viruses. (ttu.edu)
Attri K., Zhang Z., Singh A., Sharrock R. A., Xie Z. (2022) Rapid sequence and functional diversification of a miRNA superfamily targeting calcium signaling components in seed plants. (ttu.edu)

Plant Biol. (wikipedia.org)
Rev. Plant Biol. (nature.com)
Hendrawati O , Hille J, Woerdenbag HJ, Quax WJ, Kayser O. In vitro regeneration of wild chervil (Anthriscus sylvestris L.). In Vitro Cell Dev Biol Plant 2012;48:355-361. (rug.nl)

The FA2 gene of Chlamydomonas encodes a NIMA family kinase with roles in cell cycle progression and microtubule severing during deflagellation. (bio.net)

The enrichment patterns of epigenetic modifications were consistent with expression levels of genes involved in each domain under healthy conditions (Fig. S1A). (biorxiv.org)

This research has great significance for the functional characterisation of the tobacco bZIP family and our understanding of the bZIP family in higher plants. (biomedcentral.com)
Unlike other plants, the genes encoding enzymes CDPS, KS and KO were reported to be present in duplicate functional forms in Stevia . (scialert.net)
compared the structural and functional properties of F-ATP synthases in plant mitochondria with those of yeast and mammals. (tcdb.org)
The HD-ZIP gene family is composed of two functional domains, i.e. (grassius.org)
The pea early-browning virus (PEBV) has been developed as a VIGS vector and used in pea for functional analysis of several genes. (biomedcentral.com)
The development of VIGS vectors for P. sativum , G. max and P. vulgaris has paved the way for functional analysis of plant symbiosis genes in crop legumes and the transfer of knowledge from model legumes to crop plants. (biomedcentral.com)
Here our aim was to develop a "mycorrhiza-PEBV-VIGS protocol", to extend the use of VIGS for functional studies of pea genes involved in the symbiosis with AMF. (biomedcentral.com)

Central to this investigation is an understanding of what gene products are required and expressed during a natural infection and how this expression changes over time (from initial colonization to causation of disease and spread of the pathogen to new hosts) and space (in different cells or tissues within the host). (cdc.gov)
Wounded leaves of the KED-lacking plants exhibited higher binding of Evans blue dye than the wild-type, indicating a possible role for KED in healing damaged tissues . (bvsalud.org)
Polytene chromosomes are structures found in highly specialized tissues in some animal and plant species, which are amplified through successive cycles of endoreduplication, finally producing several copies of each chromosome. (scielo.br)
In plants, polytene chromosomes have been observed in only a few species, and seemed to be restricted to ovary and immature seed tissues, e.g., in Phaseolus coccineus and P. vulgaris (Nagl, 1981), until relatively recently, when they were observed in the cells of the anther tapetum of Vigna unguiculata (Guerra and Carvalheira, 1994) and of some Phaseolus species (Carvalheira and Guerra, 1994). (scielo.br)
Induction of new shoot meristems from cultured root explants is a widely used, but poorly understood, process in which apical plant tissues are regenerated from adult somatic tissue through the de novo formation of shoot meristems. (biologists.com)
Regeneration of a patterned multicellular organism from isolated pieces of adult somatic tissues is a remarkable phenomenon that occurs both in plants and animals ( Morgan, 1901 ). (biologists.com)
In this study, we identified candidate reference genes based on transcriptome data covering embryos and larvae of early development, normal adult tissues, and the hindgut under sulfide stress using the coefficient of variation (CV) method in the echiuran Urechis unicinctus , resulting in 6834 (15.82%), 7110 (16.85%) and 13880 (35.87%) candidate reference genes, respectively. (biomedcentral.com)
The candidate reference genes STX12 , EHMT1 , and LYAG were the most stable genes in early development, normal adult tissues, and hindgut under sulfide stress, respectively. (biomedcentral.com)
Reference genes are used for the normalization of gene expression because of the stability of expression levels among different tissues, different developmental stages, or under various treatments [ 5 ]. (biomedcentral.com)
The sequence of this gene is defined by 537 GenBank accessions from 518 cDNA clones, some from breast (seen 40 times), marrow (29), head neck (19), brain (18), eye (18), leukopheresis (18), lung tumor (18) and 132 other tissues. (blogspot.com)
We train our algorithms on large resources of genetic variation, DNA binding and gene expression data across multiple species, tissues and treatments. (ipk-gatersleben.de)

Vertical gene flow from transgenic oilseed rape to non-GM counterparts may also have an impact on farming and supply chain management, depending on labelling thresholds for the adventitious presence of GM material in non-GM products. (cambridge.org)
During a 15-day treatment of water deficit by cessation of irrigation, the transgenic lines LM2 and LM14 showed lower stomatal conductance and transpiration paired with lower photosynthesis, whereas transgenic line LM7 maintained its photosynthesis, declining stomatal conductance, and transpiration compared to WT plants, which is manifested into more efficient water use. (springer.com)
The genes Cs RafS1 and CsGolS1 showed similar or greater expression in one of the transgenic lines with respect to control plants. (springer.com)
Moreover, transgenic lines were more tolerant to saline stress and presented a greener phenotype with increased chlorophyll content in leaf discs compared to WT plants. (springer.com)
Furthermore, all transgenic lines exhibited significantly less accumulation of reactive oxygen species than WT plants. (springer.com)
Cervera M, Ortega C, Navarro A, Navarro L, Peña L (2000) Generation of transgenic citrus plants with the tolerance-to-salinity gene HAL2 from yeast. (springer.com)
Fu X, Khan E, Hu S, Fan Q, Liu J (2011) Overexpression of the betaine aldehyde dehydrogenase gene from Atriplex hortensis enhances salt tolerance in the transgenic trifoliate orange (Poncirus trifoliata L. Raf. (springer.com)
While no effective HLB control methods or HLB resistance citrus cultivars have been commercialized, transgenic plant technologies have been recognized as a powerful tool to control the HLB disease. (springer.com)
On the other hand, transgenic plants produced from mature tissue via genetic transformation can drastically shorten flowering and fruiting time and thus speed up field evaluation studies. (springer.com)
Synergistic activity of endochitinase and exochitinase from Trichoderma harzianum against the pathogenic fungus Venturia inaequalis in transgenic plants. (microbiologyresearch.org)
Transgenic tobacco cell cultures expressing a Trichoderma harzianum endochitinase gene release the enzyme into the medium. (microbiologyresearch.org)
Mattoo A.K., Minocha S.C., Minocha R., Handa A.K. (2010) Polyamines and cellular metabolism in plants: Transgenic approaches reveal different responses to diamine putrescine versus higher polyamines spermidine and spermine Amino acids 38:405-413. (purdue.edu)
Bs2 tomatoes are transgenic tomatoes that have been engineered to contain the Bs2 gene from pepper. (ufl.edu)
2002]). Bs2 transgenic tomatoes were developed by the Two Blades Foundation, a charitable scientific organization which holds an exclusive license to the Bs2 gene, in collaboration with scientists at University of California and University of Florida. (ufl.edu)

Although its possible involvement in response to other biotic and abiotic stresses is still unclear, we propose that SlKED may play a role in plant 's rapid, short-term, early wounding responses, such as in cellular damage healing. (bvsalud.org)
The calmodulin-binding transcription activators (CAMTA) play critical roles in plant growth and responses to environmental stimuli. (frontiersin.org)
Dodd I, Ryan A (2016) Whole-Plant Physiological Responses to Water-Deficit Stress. (springer.com)
Previous studies have shown that the bZIP TF family is involved in plant growth, development, and stress responses. (biomedcentral.com)
MicroRNAs in Plant Development and Stress Responses. (ttu.edu)
We construct intricate molecular networks that serve as the game engines, driving the complex interactions that govern plant life and responses to environmental challenges. (ipk-gatersleben.de)

2021) Nitric oxide coordinates growth, development, and stress response via histone modification and gene expression. (oeaw.ac.at)
2021) Molecular mechanisms of endomembrane trafficking in plants. (oeaw.ac.at)
Bradamante G, Mittelsten Scheid O, Incarbone M (2021) Under siege: virus control in plant meristems and progeny. (oeaw.ac.at)
2021) The EpiDiverse Plant Epigenome-Wide Association Studies (EWAS) Pipeline. (oeaw.ac.at)
Plant J. 107 (2021) 649-661. (ipk-gatersleben.de)
2021). ZmHOX32 , a member of the HD-ZIP III family (that also harbor a START domain that is able to bind to steroid ligands), appears to function in leaf morphogenesis and plant photosynthesis as judged by the enriched category of downstream genes that it regulates (Miao et al. (grassius.org)

Quantitative real-time PCR was used to test the expression of ZmCAMTA genes under several abiotic stresses (drought, salt, and cold), various stress-related hormones [abscisic acid, auxin, salicylic acid (SA), and jasmonic acid] and biotic stress [rice black-streaked dwarf virus (RBSDV) infection]. (frontiersin.org)
Furthermore, the quantitative estimation of steviol glycosides in leaves revealed that approximately 4.5 times higher glycosides accumulated in 5% sucrose treated plants than that in 3 and 1% treated plants. (scialert.net)
Real-time quantitative PCR (RT-qPCR) is a crucial and widely used method for gene expression analysis. (biomedcentral.com)

Each RBH couple consists of two genes, one from each of the two genome sequences (or genomes) to compare, which display the highest scoring hit in the other data set in a reciprocal manner [ 36 ]. (biomedcentral.com)

With all six genotypes of citrus tested including Eureka lemon, a cultivar difficult to be transformed, our results demonstrate that the kn1 gene may provide an effective molecular tool to enhance genetic transformation efficiencies of various citrus varieties. (springer.com)
This mini-review summarizes the main findings concerning the Trichoderma -plant interaction, the molecular dialogue between the two organisms, and the dramatic changes induced by the beneficial fungus in the plant. (microbiologyresearch.org)
Gechev TS , Hille J. Molecular basis of plant stress. (rug.nl)
Strigolactones, a group of terpenoid lactones, control many aspects of plant growth and development, but the active forms of these plant hormones and their mode of action at the molecular level are still unknown. (proteopedia.org)

One major limitation associated with existing protocols when used on economically important citrus species is likely low plant regeneration frequencies. (springer.com)
We further studied the collinearity between these genes and related genes of six other species. (biomedcentral.com)
Like approximately 80% of higher plant species, legumes can form root endosymbiosis with arbuscular mycorrhizal fungi (AMF), whose root-external mycelium scavenges a large soil volume for soil nutrients, in particular phosphate. (biomedcentral.com)

Although analyses that give information on the expression of a few genes provide insight and have been responsible for a large proportion of the bacterial pathogenesis literature currently available, our ultimate goal is to understand expression changes across the whole genome. (cdc.gov)
The additional information generated by whole genome studies goes far beyond that derived by characterizing in isolation more genes and gene products, because analysis of the whole genome allows complete regulatory networks to be identified and characterized. (cdc.gov)

We then surveyed the distribution of stress-related cis -regulatory elements in the −1.5 kb promoter regions of ZmCAMTA genes. (frontiersin.org)

HD-ZIP Gene Family: Potential Roles in Improving Plant Growth and Regulating Stress-Responsive Mechanisms in Plants. (grassius.org)
Update on amino acid transporter functions and on possible amino acid sensing mechanisms in plants. (uni-bielefeld.de)

Physiol Plant;175(4): e13978, 2023. (bvsalud.org)
Plants 9 (2023) 616-630. (ipk-gatersleben.de)
Plant J. (2023) Epub ahead of print. (ipk-gatersleben.de)
Plant Cell 35 (2023) 1984-2005. (ipk-gatersleben.de)

Through engaging, game-like simulations, participants can directly interact with our scientific models, gaining an immersive and intuitive understanding of plant biology. (ipk-gatersleben.de)
Our goal is to bridge science and education, providing a novel way to explore, learn, and contribute to our understanding of plant systems biology. (ipk-gatersleben.de)
BMC Plant Biology 2008, 8 (1):45. (lu.se)

Our other focus is are methods for integration of multi-omic data and identification of causal/predictive interactions between genetic variation, gene expression, metabolite levels and emergence of crop quality traits. (ipk-gatersleben.de)

Traditional plant breeding, that harnesses natural genetic variation arising during meiosis, will have a key role to deliver crop improvements in the near future. (ipk-gatersleben.de)
We use our toolbox to estimate the regulatory impact of structural genetic variation, highlight gene candidates in GWAS studies and design gene editing strategies for gene expression modulation. (ipk-gatersleben.de)
Prospective association analysis based on core drought-regulated genes may simplify the process of identifying favourable alleles, and help to understand the genetic basis of the response to terminal drought. (biomedcentral.com)

If you click on the Entrez Gene URLs you will end up at a page that summarizes what is known about the gene. (blogspot.com)
Before following this link to the POLR1A variants, let's note that on the annotated Entrez Gene website there are no alternative splice variants listed. (blogspot.com)
It's not a surprise that the Entrez Gene annotators have ignored these predictions. (blogspot.com)

Two of these methods, signature-tagged mutagenesis and in vivo expression technology, do not directly measure gene expression and do not allow true genomic-scale analysis, but they have been devised to identify genes necessary for pathogens during real infections. (cdc.gov)
However, little information has been gathered to date regarding the genomic location of drought-regulated genes, either expressed throughout plant development or at late reproductive stages influencing seed yield and quality. (biomedcentral.com)

The expression of most ZmCAMTA genes responded to both abiotic and biotic stresses. (frontiersin.org)
Moreover, as revealed by research in recent decades, some Trichoderma strains can interact directly with roots, increasing plant growth potential, resistance to disease and tolerance to abiotic stresses. (microbiologyresearch.org)
Efforts to enhance plant resistance and tolerance to a broad range of stresses by expressing Trichoderma genes in the plant genome are also addressed. (microbiologyresearch.org)

Genome-wide identification and expression analysis of the bZIP transcription factor family genes in response to abiotic stress in Nicotiana tabacum L. (biomedcentral.com)

The main benefits reported for plant extracts, used in skin care, include antioxidant and antimicrobial activities and tyrosinase inhibition effect. (mdpi.com)

This study has revealed the involvement of TFs, transporters, and photosynthetic genes, and has also given a glimpse of hormonal cross talk under the extreme water regimes, which will aid as an important resource for soybean crop improvement. (frontiersin.org)
Leaf Amino Acid Supply Affects Photosynthetic and Plant Nitrogen Use Efficiency under Nitrogen Stress. (uni-bielefeld.de)

In this study, differentially expressed genes (DEGs) under drought and flooding conditions were investigated using Illumina RNA-Seq transcriptome profiling. (frontiersin.org)

Loss-of-function mutants highlight the requirement for knox genes in shoot function. (grassius.org)

Alvarez-Gerding X, Cortés-Bullemore R, Medina C, Romero-Romero JL, Inostroza-Blancheteau C, Aquea F, Arce-Johnson P (2015) Improved salinity tolerance in Carrizo Citrange rootstock through overexpression of glyoxalase system genes. (springer.com)

Plant J 106(2):536-54 preprint bioRxiv:2020.11.09.373282 . (oeaw.ac.at)

The mechanism that overcomes drought stress in plants is facilitated by drought avoidance, drought tolerance, drought escape, and drought recovery ( Cruz De Carvalho, 2008 ). (frontiersin.org)

can reduce the severity of plant diseases by inhibiting plant pathogens in the soil through their highly potent antagonistic and mycoparasitic activity. (microbiologyresearch.org)

The SlKED knockout plants showed a similar dietary effect as the wild-type on the larval growth of tobacco hornworm . (bvsalud.org)
Solubilization of phosphates and micronutrients by the plant-growth-promoting and biocontrol fungus Trichoderma harzianum rifai 1295-22. (microbiologyresearch.org)
Increased growth of plants in the presence of the biological control agent Trichoderma harzianum. (microbiologyresearch.org)
An interesting fact regarding sucrose responsiveness is that a specific concentration of sucrose is a necessity for plant growth and survival and at the same time mere increase or decrease from the normal concentration produces adverse results. (scialert.net)
Our work demonstrated the importance of C18:2 and/or C18:3 in development of pollen exine and anther cuticle in cotton, and provided clue for further investigation of the physiological significance of the fatty acid composition in plant growth and development. (researchsquare.com)
These networks become dynamic, interactive models that mirror the plants' strategies for growth, defense, and adaptation. (ipk-gatersleben.de)

The higher endogenous sucrose content in 5% sucrose treated plants than that in 3 or 1% treated plants suggested the uptake of exogenously available sucrose by plants. (scialert.net)
CDPS, KS, KO, UGT85C2 and UGT76G1 in 5% sucrose treated plants compared to that in 1 and 3% treated plants. (scialert.net)
From times till date, studies have well documented the multifarious important functions of carbon source sucrose during plant development from their germination to maturity. (scialert.net)
In addition, sucrose also acts as gene regulator ( Koch, 1996 ). (scialert.net)

Gene coexpression analysis refers to the en masse discovery of coexpressed genes from a large variety of transcriptomic experiments. (mdpi.com)
With the increasing application of high-throughput sequencing, transcriptome analysis has become an effective method for identifying novel stable reference genes. (biomedcentral.com)
In depth analysis of the predicted gene set revealed some errors involving genes with non-canonical splice sites in their introns. (biomedcentral.com)
The analysis provided a list of gene targets for engineering ethanol tolerance in cyanobacterium Synechocystis . (biomedcentral.com)
Purification and Proteomic Analysis of Plant Plasma Membranes. (lu.se)

Our results demonstrate that expression of the kn1 gene enhances transformation efficiencies from 3 to 15 fold compared to a control vector, 3-11 fold relative to the highest transformation efficiencies reported for these citrus genotypes. (springer.com)
Increasing gene dosage greatly enhances recombinant expression of aquaporins in Pichia pastoris. (lu.se)

Beckie , H , Warwick , S , Nair , H , Séguin-Swartz G ( 2003 ) Gene flow in commercial fields of herbicide-resistant canola ( Brassica napus ). (cambridge.org)

Anatomy38

Organisms64

Diseases2

Chemicals and Drugs56

Analytical, Diagnostic and Therapeutic Techniques and Equipment16

Psychiatry and Psychology1

Phenomena and Processes74

Disciplines and Occupations6

Anthropology, Education, Sociology and Social Phenomena3

Technology, Industry, Agriculture22

Information Science4

Health Care7

Arabidopsis11

Target genes6

Transcriptional6

Biosynthesis11

Pathways7

Characterization4

Regulate2

Regulation9

Proteins5

Candidate genes2

Metabolic8

Maize10

Eukaryotic2

Physiology4

Protein9

Homologous2

Induced genes involved1

Expression patterns3

Homeobox1

MiRNA4

Biol3

Encodes1

Patterns1

Functional7

Tissues11

Transgenic14

Responses6

20216

Quantitative3

Sequences1

Molecular4

Species3

Whole genome2

Promoter1

Mechanisms in Plants2

20234

Biology3

Metabolite1

Genetic3

Entrez Gene3

Genomic2

Stresses3

Abiotic stress1

Antioxidant1

Photosynthetic2

Differentially1

Mutants1

Overexpression1

BioRxiv1

Drought tolerance1

Pathogens1

Growth6

Sucrose4

Analysis5

Enhances2

Canola1