PhylogenyEvolution, MolecularGene Transfer, HorizontalDNA, MitochondrialSpecies SpecificityGene DuplicationSequence Analysis, DNAModels, GeneticGenomicsComputational BiologyAlgorithmsGenome, MitochondrialMolecular Sequence DataBiological EvolutionGenetic VariationLikelihood FunctionsGenes, MitochondrialBase SequenceBayes TheoremFossilsPhylogeographySequence AlignmentHaplotypesGenetic SpeciationDNA, Ribosomal SpacerDNA, RibosomalMitochondriaGeographyRNA, Ribosomal, 18SDNA, ChloroplastRNA, Ribosomal, 16SGenetics, PopulationRNA, Ribosomal, 28SClassificationMitochondrial MyopathiesElectron Transport Complex IVMammalsPolymerase Chain ReactionRNA, RibosomalMutationAngiospermsOphthalmoplegia, Chronic Progressive ExternalMELAS SyndromeGenomeInvertebratesSequence Homology, Nucleic AcidDNA, PlantNADH DehydrogenaseMitochondrial ProteinsArthropodsDNA, FungalAmino Acid SequenceGymnospermsBiodiversityPrimatesBirdsMultigene FamilyMitochondrial EncephalomyopathiesVertebratesPlastidsEukaryotaHominidaeGene OrderHistory, AncientExtinction, BiologicalCluster AnalysisGenes, rRNAPaleontologyChromosomes, Human, YAsiaSymbiosisPlantsGenome, BacterialDNA PrimersLizardsPolymorphism, Restriction Fragment LengthAscomycotaCell NucleusEcosystemFishesSiberiaOptic Atrophy, Hereditary, LeberAfricaGene PoolRNA, Transfer, LeuDNA, IntergenicAnthocerotophytaSouth AmericaMERRF SyndromeStrepsirhiniEmigration and ImmigrationArchaeaFar EastDNA, BacterialSoftwareSequence Homology