Soil microbiology
... is the study of microorganisms in soil, their functions, and how they affect soil properties. It is believed ... Soil Microbiology. Fourth ed. Enfield: Science Publishers, 1999. Print. Islam, Waqar; Saqib, Hafiz Sohaib Ahmad; Adnan, ... British Natural farming Korean natural farming Effective microorganisms Soil biology Soil biomantle Soil life Tayyab, Muhammad ... Principles and Applications of Soil Microbiology. Upper Saddle River: Prentice Hall, 1998. Print. Msimbira, Levini A.; Smith, ...
Pleomorphism (microbiology)
Soil Science. 43 (5): 327-340. Bibcode:1937SoilS..43..327W. doi:10.1097/00010694-193705000-00001. ISSN 0038-075X. S2CID ... In microbiology, pleomorphism (from Ancient Greek πλέω-, pléō, "more", and -μορφή, morphḗ, form), also pleiomorphism, is the ... Penn, M Dworkin, M (June 1976). Robert Koch and two visions of microbiology. OCLC 679603238.{{cite book}}: CS1 maint: multiple ... Rosenthal, Ken S.; Tan, Michael J. (2011), "Gram-Negative Cocci and Coccobacilli", Rapid Review Microbiology and Immunology, ...
Balamuthia mandrillaris
"Balamuthia mandrillaris from soil samples". Microbiology. 150 (Pt 9): 2837-2842. doi:10.1099/mic.0.27218-0. PMID 15347743. ... Balamuthia has been isolated from soil. It is believed to be distributed throughout the temperate regions of the world. This is ... mandrillaris is a soil-dwelling amoeba and was first discovered in 1986 in the brain of a mandrill that died in the San Diego ... Journal of Clinical Microbiology. 28 (12): 2750-2756. doi:10.1128/jcm.28.12.2750-2756.1990. ISSN 0095-1137. PMC 268267. PMID ...
Soil respiration
Applied and Environmental Microbiology. 71, 12, 8573-8580 King J, Hanson P, Bernhardt E, Deangelis P, Norby R, Pregitzer K. ( ... Soil moisture is another important factor influencing soil respiration. Soil respiration is low in dry conditions and increases ... Other macrofauna burrow or ingest litter, reducing soil bulk density, breaking up soil aggregates and increasing soil aeration ... The respiration dampening effect of elevated soil moisture is amplified when soil respiration also lowers soil redox through ...
Manganese cycle
"Fungal manganese oxidation in a reduced soil". Environmental Microbiology. 7 (9): 1480-1487. doi:10.1111/j.1462-2920.2005.00842 ... An analysis of datasets on the soil chemistry of North America and Europe revealed greater than 50% of Mn in ridge soils near ... Manganese in Soils and Plants: Proceedings of the International Symposium on 'Manganese in Soils and Plants' held at the Waite ... Manganese in Soils and Plants: Proceedings of the International Symposium on 'Manganese in Soils and Plants' held at the Waite ...
Caballeronia humi
nov., isolated from peat soil". Current Microbiology. 66 (3): 300-5. doi:10.1007/s00284-012-0270-9. PMID 23196702. S2CID ... nov.: Burkholderia glathei-like bacteria from soil and rhizosphere soil". International Journal of Systematic and Evolutionary ... non-motile bacterium from the genus Burkholderia and the family Burkholderiaceae which was isolated from peat soil in Russia. ... Microbiology. 63 (Pt 12): 4707-18. doi:10.1099/ijs.0.048900-0. PMID 23959831. Type strain of Caballeronia humi at BacDive - the ...
Martian soil
Environmental Microbiology. 24 (11): 1462-2920.16152. doi:10.1111/1462-2920.16152. ISSN 1462-2912. PMID 35920032. Logan, Bruce ... and include all non-Earth soils in a new World Reference Base for Soil Resources Reference Group or USDA soil taxonomy Order, ... High concentrations of ice in soils are thought to be the cause of accelerated soil creep, which forms the rounded "softened ... Disagreement over the significance of soil's definition arises due to the lack of an integrated concept of soil in the ...
Aneurinibacillus humi
nov., Isolated from Soil Collected in Ukraine". Current Microbiology. 72 (2): 139-144. doi:10.1007/s00284-015-0930-7. PMID ... aerobic and motile bacterium from the genus of Aneurinibacillus which has been isoladed from soil from Mykhailyky in the ...
Rhizobium
nov., Isolated from chloroethylenes contaminated soil". Current Microbiology. 66 (6): 599-605. doi:10.1007/s00284-013-0313-x. ... Rhizobium is a genus of Gram-negative soil bacteria that fix nitrogen. Rhizobium species form an endosymbiotic nitrogen-fixing ... Sridevi M, Mallaiah KV (March 2009). "Phosphate solubilization by Rhizobium strains". Indian Journal of Microbiology. 49 (1): ... nov., isolated from nodules of three leguminous species". International Journal of Systematic and Evolutionary Microbiology. 61 ...
Pontibacter humi
nov., Isolated from Mountain Soil". Current Microbiology. 69 (3): 263-269. doi:10.1007/s00284-014-0580-1. PMID 24748437. v t e ... rod-shaped and non-motile bacterium from the genus of Pontibacter which has been isolated from mountain soil in Korea. Parte, A ...
Burkholderia pseudomultivorans
nov., isolated from peat soil". Current Microbiology. 66 (3): 300-5. doi:10.1007/s00284-012-0270-9. PMID 23196702. S2CID ...
Hymenobacter terrae
nov., a bacterium isolated from soil". Current Microbiology. 70 (5): 643-50. doi:10.1007/s00284-014-0760-z. PMID 25572492. ... Hymenobacter terrae is a bacterium from the genus of Hymenobacter which has been isolated from soil from Seoul in Korea. Parte ...
Larkinella harenae
nov., Isolated from Korean Beach Soil". Current Microbiology. 74 (7): 798-802. doi:10.1007/s00284-017-1246-6. PMID 28417190. ... harenae is a Gram-negative and short rod-shaped bacterium from the genus of Larkinella which has been isolated from soil from ...
Soil acidification
BMC Microbiology. 21 (1): 52. doi:10.1186/s12866-021-02115-3. ISSN 1471-2180. PMC 7890633. PMID 33596827. Tayyab, M (2018). " ... Soil acidification can cause damage to plants and organisms in the soil. In plants, soil acidification results in smaller, less ... Acid sulfate soil Alkali soil Freshwater acidification Ocean acidification Helyar, K. R.; Porter, W. M. (1989). "2 - Soil ... Therefore, mitigating soil acidity, improving soil fertility, and soil enzymatic activities, including improved microbial ...
Halovibrio salipaludis
nov., Isolated from Saline-Alkaline Soil". Current Microbiology. 78 (1): 429-434. doi:10.1007/s00284-020-02282-y. PMID 33219431 ... halophilic and motile bacterium from the genus of Halovibrio which has been isolated from saline-alkaline wetland soil from ...
Biological soil crust
Microbial resuscitation in biological soil crusts". Environmental Microbiology. 15 (10): 2799-3515. doi:10.1111/1462-2920.12140 ... compared to nearby soils, which increases the energy absorbed by the soil surface. Soils with well-developed biological soil ... These filaments bind soil particles throughout the uppermost soil layers, forming a 3-D net-like structure that holds the soil ... The effect of biological soil crusts on water infiltration and soil moisture depends on the dominant crust organisms, soil ...
Alishewanella solinquinati
nov., isolated from soil contaminated with textile dyes". Current Microbiology. 67 (4): 454-9. doi:10.1007/s00284-013-0385-7. ...
Methylobacter tundripaludum
Patrice Dion; J.D. Rummel; Chandra Shekhar Nautiyal (22 December 2007). Microbiology of Extreme Soils. Springer Science & ... "Culturable psychrotolerant methanotrophic bacteria in landfill cover soil". Microbiology. 82 (6): 847-855. doi:10.1134/ ... nov., a methane-oxidizing bacterium from Arctic wetland soil on the Svalbard islands, Norway (78 N)". International Journal of ... Systematic and Evolutionary Microbiology. 56 (1): 109-113. doi:10.1099/ijs.0.63728-0. ISSN 1466-5026. PMID 16403874. Svenning, ...
Saprotrophic bacteria
Guzev, V. S.; Zvyagintsev, D. G. (2003-03-01). "The Biometric Analysis of Bacterial Cells in Soil". Microbiology. 72 (2): 187- ... In terms of soil pH, there is a well-known pattern of bacterial dominance in neutral or slightly alkaline soils, though clear ... Growth of saprotrophic fungi and bacteria in soil". FEMS Microbiology Ecology. 78 (1): 17-30. doi:10.1111/j.1574-6941.2011. ... "Microbial activity and the dynamics of ecosystem processes in forest soils". Current Opinion in Microbiology. Environmental ...
Bibliography of encyclopedias: biology
Lal, R. Encyclopedia of soil science. Taylor & Francis, 2006. ISBN 0849350530. Lederberg, Joshua. Encyclopedia of microbiology ... Encyclopedia of environmental microbiology. Wiley, 2002. ISBN 0471354503. Lederberg, Joshua. Encyclopedia of microbiology. ... Encyclopedia of soils in the environment. Elsevier/Academic Press, 2005. ISBN 0123485304. [26] Holton, James R., Judith A. ...
Streptomyces zhihengii
nov., isolated from rhizospheric soil of Psammosilene tunicoides". Archives of Microbiology. 198 (8): 743-9. doi:10.1007/s00203 ... Streptomyces zhihengii is a bacterium species from the genus of Streptomyces which has been isolated from rhizospheric soil ...
Lysinibacillus cavernae
nov., isolated from cave soil". Archives of Microbiology. 202 (6): 1529-1534. doi:10.1007/s00203-020-01852-9. PMID 32232517. ... rod-shaped and motile bacterium from the genus of Lysinibacillus which has been isolated from soil from a karst cave in Libo ...
Sphingomonas flava
isolated from road soil". Archives of Microbiology. 197 (7): 883-8. doi:10.1007/s00203-015-1123-2. PMID 26007155. S2CID ... isolated from road soil". Archives of Microbiology. 197 (7): 883-8. doi:10.1007/s00203-015-1123-2. PMID 26007155. S2CID ... rod-shaped and non-motile bacteria from the genus of Sphingomonas which has been isolated from soil from Yongin-si from the ...
Streptomyces boncukensis
nov., isolated from saltern soil". Archives of Microbiology. 203 (1): 279-285. doi:10.1007/s00203-020-02036-1. PMID 32915250. ... aerobic and non-motile bacterium species from the genus Streptomyces which has been isolated from soil from the Boncuk Saltern ...
Unclassified Bradyrhizobium
Daniel, Rolf (June 2005). "The metagenomics of soil". Nature Reviews Microbiology. 3 (6): 470-478. doi:10.1038/nrmicro1160. ... Research has shown that there can be between 2000 and 18000 prokaryotic genomes in 1 gram of fresh soil. Soil microbiological ... atmospheric pressure and acidity of soil. Stress in the soil environment, often caused by extreme hydrological events such as ... Due to the many factors resulting in complicated changes to the bacteria in the soil, the tools used to describe microbial ...
Binning (metagenomics)
Daniel, Rolf (2005-06-01). "The metagenomics of soil". Nature Reviews Microbiology. 3 (6): 470-478. doi:10.1038/nrmicro1160. ... For example, in a single gram of soil, there can be up to 18000 different types of organisms, each with its own genome. ... Schloss, Patrick D; Jo Handelsman (2006-07-21). "Toward a Census of Bacteria in Soil". PLOS Comput Biol. 2 (7): e92. Bibcode: ... Nature Microbiology. 3 (7): 836-843. doi:10.1038/s41564-018-0171-1. ISSN 2058-5276. PMC 6786971. PMID 29807988. ...
Coprinopsis variegata
Modern Soil Microbiology. Boca Raton, FL: CRC Press. p. 205. ISBN 978-0-8247-2749-9. Coprinopsis variegata in Index Fungorum ( ... van Elsas JD, Tam L, Finlay RD, Killham K, Trevors JT (2007). "Microbial interactions in the soil". In Trevors JT, van Elsas JD ... Coprinopsis variegata can attack soil bacteria, such as species of Pseudomonas and Agrobacterium, and use them as nutrient ... giving the appearance of growing in the soil. The fungus is found in the United States, in areas east of the Great Plains. ...
Mangrove
... seedlings in autoclaved soil". Applied Soil Ecology. 75: 162-171. doi:10.1016/j.apsoil.2013.11.009. Edwards, Joseph; Johnson, ... York, Ashley (2017). "Algal virus boosts nitrogen uptake in the ocean". Nature Reviews Microbiology. 15 (10): 573. doi:10.1038/ ... The return of tide can flush out these soils, bringing them back to salinity levels comparable to that of seawater. At low tide ... High tide brings in salt water, and when the tide recedes, solar evaporation of the seawater in the soil leads to further ...
Flaviaesturariibacter
nov., isolated from soil in Jeju Island". Archives of Microbiology. 202 (10): 2663-2669. doi:10.1007/s00203-020-01963-3. ISSN ...
Aspergillus multiplicatus
A new species of Neosartoyra from Taiwan soil. Mycoscience. 35(4):309-313 Frisvad, J.C.; Larsen, T.O. (2016). "Extrolites of ... Aspergillus fumigatus and Other Pathogenic Species in Aspergillus Section Fumigati". Frontiers in Microbiology. 6: 1485. doi: ...