*  Yeast artificial chromosome
Also, due to the nature of the reliance on sequence tagged sites (STS) as a reference point when selecting appropriate clones, ... "Mapping human chromosomes by walking with sequence-tagged sites from end fragments of yeast artificial chromosome inserts". ... 2. Ligation of necessary centromeric sequences for mitotic stability 3. Ligation of Autonomously Replicating Sequences (ARS) ... the sequence as determined from the YAC clone is different from the original, natural sequence, leading to inconsistent results ...
*  Protein primary structure
Peptides can be directly sequenced, or inferred from DNA sequences. Large sequence databases now exist that collate known ... Ubiquitin is the most common of these, and usually signals that the ubiquitin-tagged protein should be degraded. Most of the ... As with phosphorylation, sulfation adds a negative charge to a previously neutral site. prenylation and palmitoylation − C ( = ... Sequence families are often determined by sequence clustering, and structural genomics projects aim to produce a set of ...
*  Molecular cloning
... a selectable genetic marker gene that can be used to enable the survival of cells that have taken up vector sequences a tag ... to replicate inside the host organism one or more unique restriction endonuclease recognition sites to serves as sites where ... The idea arose that different DNA sequences could be inserted into a plasmid and that these foreign sequences would be carried ... vector DNA with no recombinant sequence inserted). In these vectors, foreign DNA is inserted into a sequence that encodes an ...
*  Sequence-tagged site
A sequence-tagged site (or STS) is a short (200 to 500 base pair) DNA sequence that has a single occurrence in the genome and ... Sequence-Tagged Sites (STS) description on NCBI Simple sequence length polymorphism. ... They are used in shotgun sequencing, specifically to aid sequence assembly. STSs are very helpful for detecting microdeletions ... For this reason they are useful for constructing genetic and physical maps from sequence data reported from many different ...
*  40S ribosomal protein S25
Miwa T, Sudo K, Nakamura Y, Imai T (1993). "Fifty sequenced-tagged sites on human chromosome 11". Genomics. 17 (1): 211-4. doi: ... Imai T, Sudo K, Miwa T (1994). "Assignment of the human ribosomal protein S25 gene (RPS25) to chromosome 11q23.3 by sequence ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ... 2002). "The human ribosomal protein genes: sequencing and comparative analysis of 73 genes". Genome Res. 12 (3): 379-90. doi: ...
*  OPCML
Dec 1993). "A sequence-tagged site map of human chromosome 11". Genomics. 17 (3): 699-725. doi:10.1006/geno.1993.1392. PMID ... 2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40-5. doi:10.1038/ ... Shark KB, Lee NM (1995). "Cloning, sequencing and localization to chromosome 11 of a cDNA encoding a human opioid-binding cell ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ...
*  DPAGT1
Dec 1993). "A sequence-tagged site map of human chromosome 11". Genomics. 17 (3): 699-725. doi:10.1006/geno.1993.1392. PMID ... 2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40-5. doi:10.1038/ ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ...
*  FABP2
1993). "The development of sequence-tagged sites for human chromosome 4". Hum. Mol. Genet. 2 (8): 1271-88. doi:10.1093/hmg/2.8. ... Isolation of a full length cDNA and comparative sequence analyses of orthologous and paralogous proteins". J. Biol. Chem. 260 ( ...
*  PPP1R7
"Gene-based sequence-tagged-sites (STSs) as the basis for a human gene map". Nat Genet. 10 (4): 415-23. doi:10.1038/ng0895-415. ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ... 2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635-48. doi:10.1016/ ...
*  GCN5L2
"Gene-based sequence-tagged-sites (STSs) as the basis for a human gene map". Nat. Genet. 10 (4): 415-23. doi:10.1038/ng0895-415 ...
*  SETMAR
1995). "Gene-based sequence-tagged-sites (STSs) as the basis for a human gene map". Nat. Genet. 10 (4): 415-23. doi:10.1038/ ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ... 1997). "Large-scale concatenation cDNA sequencing". Genome Res. 7 (4): 353-8. doi:10.1101/gr.7.4.353. PMC 139146 . PMID 9110174 ...
*  APOA4
de Temmerman P, Visvikis S, Boerwinkle E, Siest G (1990). "Study of the sequence tagged site (STS) in the beginning of human ... a sequence polymorphism has also been identified in the 3'UTR of the third exon. Intra-species comparative gene sequence ... 1992). "Nonsynonymous polymorphic sites in the apolipoprotein (apo) A-IV gene are associated with changes in the concentration ... 1986). "The nucleotide and derived amino acid sequence of human apolipoprotein A-IV mRNA and the close linkage of its gene to ...
*  Gene map
A sequence tagged site (STS) is a short sequence of DNA (about 100 - 500 base pairs in length) that is seen to appear multiple ... as they differ from other sequences). Sequenced tagged sites can be mapped within our genome and require a group of overlapping ... and Sequence tagged site (STS) mapping. Restriction mapping is a method in which structural information regarding a segment of ... These sites are easily recognizable, usually appearing at least once in the DNA being analyzed. These sites usually contain ...
*  Contig
One common strategy is to use sequence-tagged site (STS) content mapping to detect unique DNA sites in common between BACs. The ... In bottom-up sequencing projects, a contig refers to overlapping sequence data (reads); in top-down sequencing projects, contig ... In this sequencing method, a low-resolution map is made prior to sequencing in order to provide a framework to guide the later ... The subsequent sequence reads, which are the data that contain the sequences of the small fragments, are put into a database. ...
*  Cancer Genome Anatomy Project
... and physically mapped using sequence-tagged sites (STS). The data for BAC clones are also available through CGAP and NCBI ... The resultant part of the sequence was termed the expressed sequence tag (EST) and is always at the end of the sequence close ... This allows for easier identification of a SAGE tag's corresponding sequence. In addition, there are tools associated with ... The sequencing of cDNA will produce the entire mRNA transcript that generated it. Practically, only part of the sequence is ...
*  GATA4
2000). "A minimal critical region of the 8p22-23 amplicon in esophageal adenocarcinomas defined using sequence tagged site- ... Evans T, Reitman M, Felsenfeld G (1988). "An erythrocyte-specific DNA-binding factor recognizes a regulatory sequence common to ...
*  Shotgun sequencing
A small radioactively or chemically labeled probe containing a sequence-tagged site (STS) can be hybridized onto a microarray ... The classical shotgun sequencing was based on the Sanger sequencing method: this was the most advanced technique for sequencing ... The clones are then sequenced from both ends using the chain termination method yielding two short sequences. Each sequence is ... Although shotgun sequencing can in theory be applied to a genome of any size, its direct application to the sequencing of large ...
*  List of MeSH codes (G14)
... sequence tagged sites MeSH G14.340.024.815 --- silencer elements, transcriptional MeSH G14.340.024.850 --- tandem repeat ... expressed sequence tags MeSH G14.340.024.340.137.290 --- 3' flanking region MeSH G14.340.024.340.137.295 --- 5' flanking region ... rna splice sites MeSH G14.340.024.340.137.785 --- rna 5' terminal oligopyrimidine sequence MeSH G14.340.024.340.137.910 --- ... rna splice sites MeSH G14.080.689.687.500 --- rna 5' terminal oligopyrimidine sequence MeSH G14.080.689.755 --- silencer ...
*  Y chromosome microdeletion
... mixing it with some of the about 300 known genetic markers for sequence-tagged sites (STS) on the Y chromosome, and then using ... The gold standard test for genetic mutation, namely complete DNA sequencing of a patient's Y chromosome, is still far too ... polymerase chain reaction amplification and gel electrophoresis in order to test whether the DNA sequence corresponding to the ...
*  STS
... a field of social science and the humanities Semipalatinsk Test Site for Soviet nuclear weapons Sequence-tagged site, a gene- ... a web service Station-to-Station protocol,to agree a cryptographic key Synergy Teleconferencing System, a PC-based chat server ...
*  Outline of genetics
... ribosome risk communication sequence-tagged site (STS) sex chromosome sex-linked shotgun sequencing single-nucleotide ... mutation non-coding DNA non-directiveness nonsense mutation Northern blot Nucleic acid sequence nucleus oligo oncogene ... contig craniosynostosis cystic fibrosis cytogenetic map deletion diabetes mellitus diploid DNA replication DNA sequencing ... screening genome genotype germ line haploid haploinsufficiency hematopoietic stem cell heterozygous highly conserved sequence ...
*  Peripatric speciation
"Evidence from sequence-tagged-site markers of a recent progenitor-derivative species pair in conifers", PNAS, 97 (21): 11331- ... "Cross-species amplification of mitochondrial DNA sequence-tagged-site markers in conifers: the nature of polymorphism and ... Comparison of speciation mechanisms in web-building and non-web-building groups within a lineage of spiders. Pp. 121-146 in W.L ...
*  Index of genetics articles
Self-assembly Self-fertilization Selfed Selfish DNA Sense strand Sequence Sequence assembly Sequence tagged site Sequencing Sex ... S-9 mix Sanger sequence Sanger sequencing Sarcoma Satellite Satellite chromosome Satellite DNA Scaffold Scanning hypothesis ... site Fragile X syndrome Frameshift Frameshift mutation Fraternal twin Frequency histogram Fruiting body Full gene sequence ... DNA hybridization DNA ligase DNA marker DNA polymerase DNA probe DNA repair genes DNA replication DNA sequence DNA sequencing ...
*  Paired-end tag
... or upon further sequencing (since tag sites are unique enough to serve as primer annealing sites). Paired-end tags (PET) exist ... linker sequence, a short 5' sequence tag, a short 3' sequence tag, and a short 3' linker sequence. It was shown conceptually ... On average, 20-30 tags could be sequenced with the Sanger method, which has a longer read length. Since the tag sequences are ... The cloning sites are flanked with adaptor sequences that contain restriction sites for endonucleases (discussed below). ...
*  Restriction site associated DNA markers
The most efficient way to find RAD tags is by high-throughput DNA sequencing, called RAD tag sequencing, RAD sequencing, RAD- ... The use of the flanking DNA sequences around each restriction site is an important aspect of RAD tags. The density of RAD tags ... disrupt restriction sites and lead to the absence of RAD tags or substantial DNA sequence polymorphisms that disrupt RAD tag ... The use of high-throughput sequencing to analyze RAD tags can be classified as reduced-representation sequencing, which ...
*  List of birds of Pakistan
The following tags have been used to highlight several categories. The commonly occurring native species do not fall into any ... This list's taxonomic treatment (designation and sequence of orders, families and species) and nomenclature (common and ... Cited in Birdlife International Website Clements, James F. (2000). Birds of the World: a Checklist. Cornell University Press. ...
*  List of restriction enzyme cutting sites: Bd-Bp
Cut: Cutting site and DNA products of the cut. The recognition sequence and the cutting site usually match, but sometimes the ... C decreases TAG 3'". Nucleic Acids Res. 19 (5): 1152. doi:10.1093/nar/19.5.1152. PMC 333798 . PMID 2020550. Azeddoug H, Reysset ... Recognition sequence: Sequence of DNA recognized by the enzyme and to which it specifically binds. ... A neoschizomer is a special type of isoschizomer that recognizes the same sequence as another, but cuts in a different manner. ...