DNA sequence analysis[change , change source]. After many years when palaeontologists thought whales had evolved from ... DNA sequence analysis showed the closest relationship was with artiodactyls, the even-toed ungulates. A new clade was created ... "Analyses of mitochondrial genomes strongly support a hippopotamus-whale clade". Proceedings of the Royal Society. 265 (1412): ... "More DNA support for a Cetacea/Hippopotamidae clade: the blood-clotting protein gene gamma-fibrinogen". Molecular Biology and ...
"DNA sequence and analysis of human chromosome 9". Nature. 429 (6990): 369-74. doi:10.1038/nature02465. PMC 2734081. PMID ... "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. ...
Padmanabhan, R.; Wu, Ray (1972). "Use of oligonucleotides of defined sequences as primers in DNA sequence analysis". ... Wu, Ray (April 19, 1972). "Nucleotide Sequence Analysis of DNA". Nature. 236 (68): 198-200. doi:10.1038/newbio236198a0. PMID ... Plant genetics pioneer Ray Wu invented the first method for sequencing DNA, considered a major breakthrough in genetics as it ...
"The DNA sequence and analysis of human chromosome 13". Nature. 428 (6982): 522-8. doi:10.1038/nature02379. PMC 2665288. PMID ... "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. ... 2002). "Identification of G protein-coupled receptor genes from the human genome sequence". FEBS Lett. 520 (1-3): 97-101. doi: ...
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2003). "The DNA sequence and analysis of human chromosome 6". Nature. 425 (6960): 805-11. doi:10.1038/nature02055. PMID ...
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... and the position of their DNA cleavage site relative to the target sequence.[31][32][33] DNA sequence analyses of restriction ... Freeware DNA cloning, sequence analysis and plasmid/DNA plotting software. *. Čermák V. "Restriction Analyzer". Retrieved 2016- ... Recognition sequences in DNA differ for each restriction enzyme, producing differences in the length, sequence and strand ... but the forward and backward sequences are found in complementary DNA strands (i.e., of double-stranded DNA), as in GTATAC ( ...
1999b). Further DNA sequence analyses (Madsen et al. 2001, Murphy et al., 2001 Waddell et al. 2001) supported the Euarchonta ... 2001) showing near total congruence of mtDNA-based and nuclear-based trees when such sequences were excluded, some authors ... Despite multiple papers pointing out that some mitochondrial sequences showed unusual properties (particularly murid rodents ... Comparing multi-gene analyses with phylogenomic results leaves monophyly of Euarchonta doubtful". Integrative Zoology. 10 (2): ...
Sequencing and analysis of Neanderthal genomic DNA. Science. 2006 Nov 17;314(5802):1113-8. Tringe SG et al. Comparative ... during which time the DOE JGI completed the sequencing and analyses of chromosomes 5, 16 and 19. After that project, he ... harnessing sequence comparisons between species for the discovery of genes and non-coding sequences of pivotal evolutionary and ... his DOE JGI collaborators have played a leading role in the emerging field of metagenomics-sequencing and characterizing DNA ...
Mungall AJ, Palmer SA, Sims SK, et al., The DNA sequence and analysis of human chromosome 6., in Nature, vol. 425, nº 6960, ... Wistow G, Bernstein SL, Wyatt MK, et al., Expressed sequence tag analysis of human RPE/choroid for the NEIBank Project: over ... Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., in Proc. Natl. Acad. Sci. U.S. ... Nucleotidi · Basi azotate · Acidi nucleici (DNA · RNA) · Cromosomi · Genoma. Concetti chiave. Gene · Codice genetico · Allele · ...
2002). "The DNA sequence and comparative analysis of human chromosome 20". Nature. 414 (6866): 865-71. doi:10.1038/414865a. ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ... 2005). "An analysis of PAX1 in the development of vertebral malformations". Clin. Genet. 68 (5): 448-53. doi:10.1111/j.1399- ...
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2002). "The DNA sequence and comparative analysis of human chromosome 20". Nature. 414 (6866): 865-71. doi:10.1038/414865a. ... DNA metabolic process. • multicellular organism development. • adenylate cyclase-activating adrenergic receptor signaling ... Bruno JF, Whittaker J, Song JF, Berelowitz M (1991). "Molecular cloning and sequencing of a cDNA encoding a human alpha 1A ... 1995). "Cloning and pharmacological characterization of human alpha-1 adrenergic receptors: sequence corrections and direct ...
2001). "The DNA sequence and comparative analysis of human chromosome 20". Nature. 414 (6866): 865-871. doi:10.1038/414865a. ... of the euchromatic DNA.[5] Since then, due to sequencing improvements and fixes, the length of chromosome 20 has been updated ... and represents between 2 and 2.5 percent of the total DNA in cells. Chromosome 20 was fully sequenced in 2001 and was reported ... Chromosome 20 spans around 63 million base pairs (the building material of DNA) ...
by 16S Ribosomal DNA Sequence Analysis". International Journal of Systematic Bacteriology. 47 (4): 921-925. doi:10.1099/ ... Molecular analysis of the patient isolate allowed the classification of the strain to B. lusitaniae, a genospecies previously ... Vitorino, L. L.; Margos, G.; Zé-Zé, L.; Kurtenbach, K.; Collares-Pereira n, M. (2010). "Plasmid profile analysis of Portuguese ... "Fine-Scale Phylogeographic Structure of Borrelia lusitaniae Revealed by Multilocus Sequence Typing". PLOS ONE. 3 (12): 1-13. ...
DNASTAR provides DNA sequence assembly and analysis. Gene Codes Corporation Genedata software for data analysis and storage. ... Strand Life Sciences TimeLogic offers DeCypher FPGA-accelerated BLAST, Smith-Waterman, HMMER and other sequence search tools.. ...
DNA sequence analysis further confirmed the identity. Another case found N. sphaerica isolated from a corneal ulcer. A woman in ... rRNA sequence comparison of the ITS region confirmed N. sphaerica identity. Cases of leaf spot disease of kiwi fruit (Actinidia ... Analysis of corneal scrapings showed presence of hyphae elements suggesting cause of ulcer from a fungal pathogen. Isolated ...
Zheng H, Ji C, Li J, Jiang H, Ren M, Lu Q, Gu S, Mao Y, Xie Y (August 2004). "Cloning and analysis of human Apg16L". DNA ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ... 2005). "Cloning and analysis of human Apg16L". DNA Seq. 15 (4): 303-5. doi:10.1080/10425170400004104. PMID 15620219. S2CID ... 2007). "Association analysis of genetic variants in IL23R, ATG16L1 and 5p13.1 loci with Crohn's disease in Japanese patients". ...
Taxonomic and biogeographic implications of an analysis of nuclear DNA sequence data". Proceedings of the Royal Society of ... DNA analysis has shown the family Maluridae to be related to the Meliphagidae (honeyeaters), and the Pardalotidae (pardalotes, ... A 2017 genetic study using both mitochondrial and nuclear DNA found the ancestors of the superb and splendid fairywrens ...
"Theoretical analysis of mutation hotspots and their DNA sequence context specificity" (PDF). Mutation Research. 544 (1): 65-85 ... Hotspots can arise at certain nucleotide sequences because of interactions between the DNA and DNA repair, replication, and ... At the genotype level recurrent evolution can only be detected using DNA sequencing data. The same or similar changes in the ... An example of this would include some types of phase variation that involve highly directed changes at the DNA sequence level. ...
Palatnick, Aspyn; Zhou, Bin; Ghedin, Elodie; Schatz, Michael C (2020-12-07). "iGenomics: Comprehensive DNA sequence analysis on ... "The world's first DNA "tricorder" in your pocket". Cold Spring Harbor Laboratory. 2020-12-07. Retrieved 2020-12-26. "The Trek ... "Purdue chemical-analysis method promises fast results". Pursue University. 2006-03-16. Archived from the original on April 8, ... Michael Schatz and his intern Aspyn Palatnick published a paper on the first mobile app to allow anybody to study DNA virtually ...
Mulet, Magdalena; Lalucat, Jorge; García-Valdés, Elena (March 2010). "DNA sequence-based analysis of the Pseudomonas species". ... Based on 16S rRNA analysis, similar species have been placed in its group. A comparative genomic and phylogenomic study in 2020 ... Jul 2000). "Phylogenetic affiliation of the pseudomonads based on 16S rRNA sequence". Int J Syst Evol Microbiol. 50 (4): 1563- ... Nikolaidis, Marios; Mossialos, Dimitris; Oliver, Stephen G.; Amoutzias, Grigorios D. (2020-07-24). "Comparative Analysis of the ...
PubMed id 20379614)1, 4 Rose J.E....Uhl G.R. (2010) 8. DNA sequence and analysis of human chromosome 9. (PubMed id 15164053)1, ... 2004). "DNA sequence and analysis of human chromosome 9". Nature. 429 (6990): 369-74. doi:10.1038/nature02465. PMC 2734081. ... 2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci ... This gene is found in a cluster with two other members of the gene family, having in common a zinc finger-like DNA-binding ...
Cloning and sequence analysis of the complementary DNA". Biochemistry. 26 (13): 3975-82. doi:10.1021/bi00387a035. PMID 3651428 ...
The paternal DNA in the mother's plasma had to have come from the fetus. Then, they could reliably identify fetal DNA, which ... And each case seems to present a new low in terms of the depth and quality of analysis." She sees a common thread in these ... So they wanted to focus on genetic fragments containing paternally inherited sequences the mother did not share, but had ... The inventors realized that the fetus had DNA derived from the father as well as the mother, and that paternal DNA was not ...
The Chimpanzee Sequencing and Analysis Consortium. Initial sequence of the chimpanzee genome and comparison with the human ... 由於粒線體缺乏用來檢查複製錯誤的能力,因此粒線體DNA(mDNA)的變異速率比細胞核DNA(一般所指的DNA)更快。粒線體的突變速率快了20倍,這使mDNA能夠用來較為精確地追溯出母系祖先。研究族群中的mDNA,也能使人們得知此族群過去的遷移
... sequence-specific DNA binding. • RNA polymerase II regulatory region sequence-specific DNA binding. • DNA binding. • sequence- ... "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. ... specific DNA binding. • transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific ... 2002). "Complete mutation analysis panel of the 39 human HOX genes". Teratology. 65 (2): 50-62. doi:10.1002/tera.10009. PMID ...
... based on morphological and DNA sequence comparisons, Chalara fraxinea was suggested to be the asexual stage (anamorph) of the ... Genetic analysis of the fungus Lambertella albida which grows harmlessly on petioles of the Manchurian ash (Fraxinus ... The sequence has been published on the website OpenAshDieBack and offers clues to how the fungus infects trees. The study has ... Teams from The Sainsbury Laboratory (TSL) and the John Innes Centre in Norwich sequenced the genome of the fungus in December ...
Once a region of DNA is identified as contributing to a phenotype, it can be sequenced. The DNA sequence of any genes in this ... Analysis of variance[edit]. The simplest method for QTL mapping is analysis of variance (ANOVA, sometimes called "marker ... DNA locus associated with variation in a quantitative trait. A quantitative trait locus (QTL) is a locus (section of DNA) that ... In a recent development, classical QTL analyses were combined with gene expression profiling i.e. by DNA microarrays. Such ...
Systems biology Bioinformatics Computational genomics Computational biology Microarray analysis DNA microarray Pathway analysis ... Laboratory Corporation and Quest Diagnostics to develop a solution for scoring genetic variation for next generation sequencing ... "The Return on Investment for Ingenuity Pathways Analysis within the Pharmaceutical Value Chain", Zimmerman, Reeve, and Golden, ... "Ingenuity Preps New NGS Variant Analysis Tool, Signs Translational Oncology Group as Beta Tester". BioInform. GenomeWeb. ...
An analysis of mitochondrial DNA sequences published in 2003 confirmed that the black-billed magpie and the yellow-billed ... A more recent study using both mitochondrial and nuclear DNA found that magpies in east and northeast China are genetically ...
The genome of S. pneumoniae is a closed, circular DNA structure that contains between 2.0 and 2.1 million base pairs depending ... The recent advances in next-generation sequencing and comparative genomics have enabled the development of robust and reliable ... further analysis showed that neutrophils exposed to dead H. influenzae were more aggressive in attacking S. pneumoniae.[28] ... Competence in S. pneumoniae is induced by DNA-damaging agents such as mitomycin C, fluoroquinolone antibiotics (norfloxacin, ...
December 1999). "Identification of Ebola virus sequences present as RNA or DNA in organs of terrestrial small mammals of the ... "Virological Analysis: no link between Ebola outbreaks in west Africa and Democratic Republic of Congo". World Health ... Genome-sequencing showed that this outbreak was not related to the 2014-15 West Africa Ebola virus outbreak, but was the same ... Genome sequencing suggests that this outbreak, the 11th outbreak since the virus was first discovered in the country in 1976, ...
Mitochondrial DNA data for the D-loop sequence suggests that mallards may have evolved in the general area of Siberia. Mallard ... Genetic analysis has shown that certain mallards appear to be closer to their Indo-Pacific relatives while others are related ... Mallards are differentiated in their mitochondrial DNA between North American and Eurasian populations,[17] but the nuclear ... The genome of Anas platyrhynchos was sequenced in 2013.[6] ...
DNA studies also suggest an unknown degree of interbreeding between Homo sapiens sapiens and Homo sapiens denisova.[27] ... "Phylogeographic Analysis of the mid-Holocene Mammoth from Qagnax Cave, St. Paul Island, Alaska" (PDF).. ... "Callaway, Ewen (22 September 2011), "First Aboriginal genome sequenced", Nature, Nature News, doi:10.1038/news.2011.551 ... Evidence from canine DNA collected by Robert K. Wayne suggests that dogs may have been first domesticated in the late Middle ...
... and first sequenced in 1986-when two Japanese research teams sequenced the chloroplast DNA of liverwort and tobacco.[5] Since ... "Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of ... DNA replicationEdit. Leading model of cpDNA replicationEdit. Chloroplast DNA replication via multiple D loop mechanisms. ... Chloroplast DNA Interactive gene map of chloroplast DNA from Nicotiana tabacum. Segments with labels on the inside reside on ...
2004). "Mass spectrometry analysis of recombinant human ZP3 expressed in glycosylation-deficient CHO cells". Biochemistry. 43 ( ... A variation in the last exon of this gene has previously served as the basis for an additional ZP3 locus; however, sequence and ... negative regulation of transcription, DNA-templated. • phosphatidylinositol-mediated signaling. • single fertilization. • egg ... The nascent protein contains a N-terminal signal peptide sequence, a conserved "ZP domain" module, a consensus furin cleavage ...
... mismatch as small as a single DNA base pair is significant so perfect matches require knowledge of the exact DNA sequence of ... "Data analysis slides by Center for International Blood and Marrow Transplant Research". mcw.edu. Archived from the original on ...
Kamboh MI, Aston CE, Hamman RF (2000). "DNA sequence variation in human apolipoprotein C4 gene and its effect on plasma lipid ... "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. ... 2007). "Proteomic analysis of human very low-density lipoprotein by two-dimensional gel electrophoresis and MALDI-TOF/TOF". ... "Large-scale candidate gene analysis of spontaneous clearance of hepatitis C virus". J. Infect. Dis. 201 (9): 1371-80. doi ...
The DNA sequence of a gene often varies from one individual to another. Those variations are called alleles. While some genes ... Gupta, R.S.; Chan, D.H.Y.; Siminovitch, L. (1978). "Evidence obtained by segregation analysis for functional hemizygosity at ... Zygosity is a description of whether those two alleles have identical or different DNA sequences. In some cases the term " ... Diploid organisms have the same loci on each of their two sets of homologous chromosomes except that the sequences at these ...
This was further confirmed by molecular studies of their DNA.[6] These also showed that the brolga is more closely related to ... Analyses showed strong niche separation between Brolgas and sarus cranes by diet. It is likely that their diet in dry season ... "Mitochondrial genome sequences and the phylogeny of cranes (Gruiformes: Gruidae)". Auk. 127 (2): 440-452. doi:10.1525/auk. ... Isotopic analyses of molted feathers in their breeding grounds along the Gulf of Carpentaria showed their diet to be diverse ...
Satellite DNA. *Selfish DNA. *Sequence analysis. *Single nucleotide polymorphism. T. *Tandem repeat ... Pages in category "DNA". The following 33 pages are in this category, out of 33 total. ... Retrieved from "https://simple.wikipedia.org/w/index.php?title=Category:DNA&oldid=4367965" ...
In 2010, the Caulobacter NA1000 strain was sequenced and all differences with the CB15 "wild type" strain were identified.[6] ... In Caulobacter cells, replication of the chromosome involves about 2 million DNA synthesis reactions for each arm of the ... "The diversity and evolution of cell cycle regulation in alpha-proteobacteria: A comparative genomic analysis". BMC Systems ... "Complete genome sequence of Caulobacter crescentus". Proceedings of the National Academy of Sciences of the United States of ...
A phylogenetic hypothesis for passerine birds: taxonomic and biogeographic implications of an analysis of nuclear DNA sequence ...
DNA binding. • sequence-specific DNA binding. • transcription factor activity, sequence-specific DNA binding. • transcriptional ... "A comprehensive analysis of PAX8 expression in human epithelial tumors". The American Journal of Surgical Pathology. 35 (6): ... transcription regulatory region DNA binding. • RNA polymerase II core promoter sequence-specific DNA binding. • RNA polymerase ... sequence-specific DNA binding. • transcriptional activator activity, RNA polymerase II transcription regulatory region sequence ...
... but recent research into DNA sequences suggests that this interpretation leaves the Pinales without Taxales as paraphyletic, ... Interpretation of concentrations determined by analysis is easy only when a nutrient occurs in excessively low or occasionally ... A new classification and linear sequence based on molecular data can be found in an article by Christenhusz et al.[7] ... Phylogeny of the Pinophyta based on cladistic analysis of molecular data.[5] ...
... revealed the presence of the DNA sequence of Borrelia burgdorferi making him the earliest known human with Lyme disease.[242] ... Lyme disease fact sheet Analysis of CDC data on VoxHealth. Retrieved on 2013-30-1 ... The examination of preserved museum specimens has found Borrelia DNA in an infected Ixodes ricinus tick from Germany that dates ... Except for one study in Europe,[229] much of the data implicating lizards is based on DNA detection of the spirochete and has ...
Saint Nicolas on a text by Eric Crozier which covers the saint's legendary life in a dramatic sequence of events. A tenor ... In the absence of DNA testing, however, it is not yet possible to know for certain whether the pelvis is from the same man.[101 ... Scientific analysis[edit]. Saint Nicholas, Russian icon from first quarter of the 18th century (Kizhi monastery, Karelia) ...
Complete mitochondrial DNA of the hagfish, Eptatretus burgeri: the comparative analysis of mitochondrial DNA sequences strongly ... 28S and 18S ribosomal DNA sequences support the monophyly of lampreys and hagfishes. Molecular Biology and Evolution 15 (12): ...
DNA analysis consistently shows that all existing red wolves carry coyote genes. This has caused a problem for Canid taxonomy, ... "Large sequence divergence among mitochondrial DNA genotypes within populations of eastern African black-backed jackals" (PDF). ... analysis of control region haplotypes of the mitochondrial DNA and sex chromosomes from Mexican wolves, a critically endangered ... However, DNA study shows that "the dingo originates from domesticated dogs, originally from East Asia"[16] (which reverted to ...
1977). "Nucleotide sequence of bacteriophage phi X174 DNA". Nature. 265 (5596): 687-695.. ... ENCODE: the complete analysis of the human genome. References[change , change source]. *↑ Hans Winkler, Professor of Botany at ... The C. elegans sequencing consortium (1998). "Genome sequence of the nematode C. elegans: a platform for investigating biology" ... This includes both the genes and the non-coding sequences of the DNA. Professor Hans Winkler coined the term in 1920.[1] ...
"Genetic analysis of completely sequenced disease-associated MHC haplotypes identifies shuffling of segments in recent human ... either as a consequence of recombination-obstruction within the DNA, as a consequence of repeated selection for the entire ... The SNP analysis of the haplotype suggests a potential founding affect of 20,000 years within Europe, though conflicts in ... Castaño-Rodríguez N, Diaz-Gallo LM, Pineda-Tamayo R, Rojas-Villarraga A, Anaya JM (February 2008). "Meta-analysis of HLA-DRB1 ...
Early DNA-analysis showed that the Capparaceae-as defined at that moment-were paraphyletic, and it was suggested to assign the ... Hall, J.C.; Sytsma, K.J.; Iltis, H.H. (2002). "Phylogeny of Capparaceae and Brassicaceae based on chloroplast sequence data". ... Current insights in the relationships of the Brassicaceae, based on a 2012 DNA-analysis, are summarized in the following tree.[ ... It has long been clear that the Aethionema are sister of the remainder of the family.[9] One analysis from 2014 represented the ...
"Same DNA deletion paves paths to autism, schizophrenia , Spectrum". Spectrum. 2016-10-18. Retrieved 2016-11-13.. ... Gruneberg, H., 1938 An analysis of the "pleiotropic" effects of a new lethal mutation in the rat (Mus norvegicus). Proc. R. Soc ... evidence from a meta-analysis of twin studies". Archives of General Psychiatry. 60 (12): 1187-1192. doi:10.1001/archpsyc.60.12. ...