March 2007). "Suitability of partial 16S ribosomal RNA gene sequence analysis for the identification of dangerous bacterial ...

"Reverse transcriptase pauses at N2-methylguanine during in vitro transcription of Escherichia coli 16S ribosomal RNA". ... of retroviral reverse transcriptase present in ribosomal RNA. In a 1984 publication with John E. Hearst, and in collaboration ...

"16s ribosomal RNA sequence analysis for determination of phylogenetic relationship among methylotrophs" Journal of General ... Using small-subunit 16S rRNAs and comparing metabolic/phylogenic similarities and differences< between M. flagellatus and its ... "Use of 16S rRNA analysis to investigate phylogeny of methylotrophic bacteria" International Journal of Systematic Bacteriology ... or Alexa for targeting 16S rRNA. The fluoresced microbe can then be subjected to analysis and cell sorting. The detection phase ...

Chromophyte plastid 16S ribosomal RNA genes found in a clone library from Atlantic Ocean seawater. J. Phycol. 31: 979-988. ( ... Molecular biology techniques: Cloning and sequencing of genes such as that of ribosomal RNA, which allows researchers to ... 2001: Through sequencing of the ribosomal RNA gene extracted from marine samples, several European teams discover that ...

Aoshima M, Nishibe Y, Hasegawa M, Yamagishi A, Oshima T (1996). "Cloning and sequencing of a gene encoding 16S ribosomal RNA ... Its RNA polymerase does not react with antibodies against Desulfurococcus RNA polymerase. It has a GC-content of 41.0 ± 0. 2 ... Burggraf S, Huber H, Stetter KO (1997). "Reclassification of the crenarchael orders and families in accordance with 16S rRNA ...

It also has 69 RNA genes in its genome. The 16s ribosomal RNA gene of X. azovorans KF46FT has been amplified using the ... Amplification of the 16S ribosomal RNA and subsequent phylogenetic analysis was performed using the ARB software package. ARB ... Sequencing of the 16S ribosomal RNA gene revealed phylogenetic relatives within 95.0 to 96.1 percent similarity. Those ... This was determined by cell plate counting and ribosomal intergenic spacer analysis (RISA). Aerobic azoreductases make a ...

... based on partial 16S and 12S ribosomal RNA gene sequences". Marine Biology. 150 (1): 111-119. doi:10.1007/s00227-006-0335-z. ... The cladogram is based on molecular phylogeny using mitochondrial (12S, 16S) and nuclear (18S, 28S, and H3) gene markers by ... based on mitochondrial 16S and 12S rRNA genes". Molecular Phylogenetics and Evolution. 31 (1): 89-95. doi:10.1016/j.ympev. ...

As a result of 16S ribosomal RNA sequence analysis, many members of Thiobacillus have been reassigned. Thiobacillus versutus to ...

... including protein family existence and 16S ribosomal RNA, produce similar results at lower resolutions. Bacterial phyla § ... Additionally, all CPR members are missing the L30 ribosomal protein, a trait that is often seen in symbionts. Many of its ... Furthermore, CPR members have unique ribosomal features. While the members of CPR are generally uncultivable, and therefore ... CPR lineages are generally characterized as having small genomes and lacking several biosynthetic pathways and ribosomal ...

Stackebrandt, Erko; Wehmeyer, Uta; Liesack, Werner (December 1986). "16S ribosomal RNA- and cell wall analysis of Gemmata ... including ribosomal proteins. One or more nucleoid-like regions of densely compact DNA is commonly observed in G. obscuriglobus ...

In bioinformatics, the EzTaxon database is a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA ... a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences". International Journal of ... a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species". Int J Syst Evol Microbiol. 62 ... Based on 16S rRNA sequence phylogeny, some obviously misclassified species have been renamed using special suffixes. For ...

A more generalizable tool is the 16S ribosomal RNA gene, which is found in bacteria and archaea. This gene evolves very slowly ... Other ideas include the "RNA World" hypothesis, which postulates that the first biologic molecule was RNA, and the idea that ...

... this attenuation allows higher levels of expression of 16S ribosomal RNA relative to the tRNA gene downstream. The product of ...

... a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences". International Journal of ... a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB". Nucleic Acids ... "The atypical mechanosensitive microRNA-712 derived from pre-ribosomal RNA induces endothelial inflammation and atherosclerosis ... Typically interfering RNAs target the 3'UTR, but inclusion of binding sites within the sequence of the protein itself allows ...

based on 26 clinical isolates from Belgium that shared 94-95% homology after 16S ribosomal RNA sequencing. The species ...

"Three widely separated positions in the 16S RNA lie in or close to the ribosomal decoding region; a site-directed cross-linking ... "Modifications of ribosomal RNA: From enzymes to function". Ribosomes: Structure, Function, and Dynamics. Springer Verlag. pp. ... RNA. 15 (12): 2312-20. doi:10.1261/rna.1584209. PMC 2779675. PMID 19861420. Dontsova, O; Tishkov, V; Dokudovskaya, S; Bogdanov ... Her research interests includes: structure and functions of RNA-containing cellular machines, functional properties and ...

Mahendran B, Ghosh SK, Kundu SC (April 2006). "Molecular phylogeny of silk-producing insects based on 16S ribosomal RNA and ... Liu B, Davis TM (November 2011). "Conservation and loss of ribosomal RNA gene sites in diploid and polyploid Fragaria (Rosaceae ... Mochizuki K (2010). "DNA rearrangements directed by non-coding RNAs in ciliates". Wiley Interdisciplinary Reviews. RNA. 1 (3): ... https://dx.doi.org/10.1590/S1516-89132008000200003 Nani TF, Cenzi G, Pereira DL, Davide LC, Techio VH (2015). "Ribosomal DNA in ...

Specimens from Baja California have been sequenced for the 16S ribosomal RNA, Histone H3 and CO1 genes. Marcus, Ev., & Er. ...

A 1476-bp fragment of the rrs gene encoding the 16S ribosomal RNA was amplified and sequenced. Surprisingly, a BLAST search did ... not result in a close similarity with any published 16S RNA gene sequences from other bacteria. The level of 16S rRNA gene ... An initial phylogenetic analysis based on 16S rRNA, clustered D. massiliensis with Rickettsiella grylli. Because of its low 16S ... Comparative 16S rRNA gene sequence analysis showed that this strain belongs to the family Coxiellaceae, order Legionellales of ...

The 12S rRNA is the mitochondrial homologue of the prokaryotic 16S and eukaryotic nuclear 18S ribosomal RNAs. Mutations in the ... Mitochondrially encoded 12S ribosomal RNA (often abbreviated as 12S or 12S rRNA) is the SSU rRNA of the mitochondrial ribosome ... Eperon IC, Anderson S, Nierlich DP (July 1980). "Distinctive sequence of human mitochondrial ribosomal RNA genes". Nature. 286 ... Their 2 rRNA, 22 tRNA and 13 mRNA genes are very useful in phylogenetic studies, in particular the 12S and 16S rRNAs. ...

Mitochondrially encoded 16S RNA (often abbreviated as 16S) is the mitochondrial large subunit ribosomal RNA that in humans is ... The 16S rRNA is the mitochondrial homologue of the prokaryotic 23S and eukaryotic nuclear 28S ribosomal RNAs. Mitochondrial DNA ... Eperon IC, Anderson S, Nierlich DP (July 1980). "Distinctive sequence of human mitochondrial ribosomal RNA genes". Nature. 286 ... 2001). "Mitochondrial 16S rRNA sequence diversity of hominoids". The Journal of Heredity. 92 (6): 490-496. doi:10.1093/jhered/ ...

However 16S ribosomal RNA research finds that while common, these species make up only 5% of skin bacteria. However, skin ... The estimate of the number of species present on skin bacteria has been radically changed by the use of 16S ribosomal RNA to ... These samples then were analyzed using 16S rDNA libraries so that strains that did not grow well in cultures could be ...

Freshwater and marine cable bacteria have been found to be 88% similar based on 16S ribosomal RNA comparisons. These genera are ...

Initial examination of single-stranded ribosomal RNA indicated that the organism most likely belonged to the Archaea domain. ... Nanoarchaeum is peculiar in that its 16S RNA sequence is undetectable by the most common methods. ... They argue that the initial sample, ribosomal RNA only, was biased and Nanoarchaeum actually belongs to the "Euryarchaeota" ... A total of 95% of its DNA encodes for proteins or stable RNA molecules. N. equitans has small appendages that come out of its ...

cite journal}}: Cite journal requires ,journal= (help) "Leptopelis grandiceps voucher MTSN 7685 16S ribosomal RNA gene, partial ... 841 ttaatgggag tagtcttgat natattt The other sequence is a partial sequence of the 16S ribosomal RNA gene: 1 gnntcgcctg ...

... the classification of Halobacteroides and Haloanaerobacter species based on sequence comparisons of the 16S ribosomal RNA gene ...

The 40S subunit contains a 18S ribosomal RNA (abbreviated 18S rRNA), which is homologous to the prokaryotic 16S rRNA. The 60S ... Both subunits contain dozens of ribosomal proteins arranged on a scaffold composed of ribosomal RNA (rRNA). The small subunit ... doi:10.1261/rna.2624511. PMC 3153980. PMID 21693620. "EMDB-1067: Ribosomal 80S-eEF2-sordarin complex from S. cerevisiae - EM ... Ribosomal proteins enter the nucleolus and combine with the four rRNA strands to create the two ribosomal subunits (one small ...

Like other members in its family, it has a characteristic 16S ribosomal RNA which consists of 1474 base pairs. In 1976 the ... in the Gamma Division of Proteobacteria on the Basis of 16s rRNA Sequence Comparisons". International Journal of Systematic and ...

Current knowledge of the microbial ecology of the subsurface is primarily based on 16S ribosomal RNA (rRNA) gene sequences. ...

However, phylogenetic analyses based on 16S ribosomal RNA (rRNA) gene sequences has divided the genus Butyrivibrio into six ...