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*  5S ribosomal RNA
16S and 23S) rRNA genes. Crystallographic studies indicate that 5S rRNA-binding proteins and other proteins of the central ... Page for 5S ribosomal RNA at Rfam 5SData 5S Ribosomal RNA at the US National Library of Medicine Medical Subject Headings (MeSH ... Template:Infobox rfamh The 5S ribosomal RNA (5S rRNA) is an approximately 120 nucleotide-long ribosomal RNA molecule with a ... "Interaction of the RNA binding fingers of Xenopus transcription factor IIIA with specific regions of 5 S ribosomal RNA". ...
*  16S ribosomal RNA
... (or 16S rRNA) is the component of the 30S small subunit of a prokaryotic ribosome that binds to the Shine- ... Bacterial Sequencing The Ribosomal Database Project Ribosomes and Ribosomal RNA: (rRNA) SILVA rRNA database Greengenes: 16S ... Chakravorty S, Helb D, Burday M, Connell N, Alland D (May 2007). "A detailed analysis of 16S ribosomal RNA gene segments for ... Coenye T, Vandamme P (November 2003). "Intragenomic heterogeneity between multiple 16S ribosomal RNA operons in sequenced ...
*  SSU rRNA
"Escherichia coli 16S ribosomal RNA". "Halobacterium salinarum 18S ribosomal RNA". "Homo sapiens 18S ribosomal RNA (nuclear)". ... "Arabidopsis thaliana 16S ribosomal RNA (chloroplast)". Woese, Carl R.; Kandler, O; Wheelis, M (1990). "Towards a natural system ... Small subunit ribosomal ribonucleic acid (SSU rRNA) is the smallest of the two major RNA components of the ribosome. Associated ... LSU rRNA: the large subunit ribosomal ribonucleic acid. " ... with a number of ribosomal proteins, the SSU rRNA forms the ...
*  Clostridium cadaveris
Woo, P.C.; Lau,Chan,Fung,Tang,Yuen (2005). "Clostridium bacteramia characterized by 16S ribosomal RNA gene sequencing". Journal ... Currently the standard to identify clostrida species such as C. cadaveris is via molecular techniques utilizing ribosomal RNA ...
*  Rifamycin
Based on 16S ribosomal RNA sequences, Bala et al. renamed the species in 2004 Amycolatopsis rifamycinica. Rifamycins were first ... This is due to the high affinity of rifamycins for the prokaryotic RNA polymerase. The selectivity of the rifamycins depends on ... RifA through rifE encode a type I polyketide synthase module, with the loading module being a non-ribosomal peptide synthetase ... The rifamycins have a unique mechanism of action, selectively inhibiting bacterial DNA-dependent RNA polymerase, and show no ...
*  Brocadia fulgida
The species' 16S ribosomal RNA sequence has been determined. Q. Ashton Acton (2013). Issues in Chemical, Biological, and ...
*  Globicatella sulfidifaciens
Lau, S K P (1 March 2006). "Globicatella bacteraemia identified by 16S ribosomal RNA gene sequencing". Journal of Clinical ...
*  Micromonospora inyonensis
Doi, Yohei; Arakawa, Yoshichika (2007). "16S ribosomal RNA methylation: emerging resistance mechanism against aminoglycosides ...
*  Metagenomics
Lane, DJ; Pace B; Olsen GJ; Stahl DA; Sogin ML; Pace NR (1985). "Rapid determination of 16S ribosomal RNA sequences for ... These early studies focused on 16S ribosomal RNA sequences which are relatively short, often conserved within a species, and ... As viruses lack a shared universal phylogenetic marker (as 16S RNA for bacteria and archaea, and 18S RNA for eukarya), the only ... These surveys of ribosomal RNA (rRNA) genes taken directly from the environment revealed that cultivation based methods find ...
*  Ancient DNA
Fish SA; Shepherd TJ; McGenity TJ; Grant WD (May 2002). "Recovery of 16S ribosomal RNA gene fragments from ancient halite". ... Fish SA; Shepherd TJ; McGenity TJ; Grant WD (2002). "Recovery of 16S ribosomal RNA gene fragments from ancient halite". Nature ...
*  Burkholderia singaporensis
AY197330 Burkholderia singaporensis strain Gs 16S ribosomal RNA gene, partial sequence. Direct Submission NCBI GenBank " ...
*  List of Nepenthes endophyte species
Bacillus cibi strain AIMST Ngme2 16S ribosomal RNA gene, partial sequence. NCBI. Bacillus cibi strain AIMST Nmae9 16S ribosomal ... Bacillus cereus strain AIMST Nalbe1 16S ribosomal RNA gene, partial sequence. NCBI. Bacillus cereus strain AIMST Nalbe7 16S ... Bacillus cereus strain AIMST Nalbe8 16S ribosomal RNA gene, partial sequence. NCBI. Bacillus cereus strain AIMST Nalme2 16S ... Bacillus cereus strain AIMST Nalme13 16S ribosomal RNA gene, partial sequence. NCBI. Bacillus cereus strain AIMST Ngme4 16S ...
*  Brevinema andersonii
"Brevinema andersonii strain ATCC 43811 16S ribosomal RNA gene, partial - Nucleotide - NCBI". www.ncbi.nlm.nih.gov. Retrieved ... The 16S rRNA genome is extracted was a partial genome with 1490 bp, the 16S rRNA partial genome reads as: DEFOSSE, D. L.; ... There is also a distinguishing 16S rRNA sequence that corresponds to position 724 to 750 in E. coli (5'- ...
*  Oleispira antarctica
16S ribosomal RNA gene clones identified as belonging to the genus Oleispira were found to be very commonly occurring in ... Based on sequencing of 16S ribosomal RNA genes conducted by Yakimov et al., phylogenetically, this organism is related most ... Sequencing of O. lenta's 16S ribosomal RNA genes revealed sequence similarity of about 97.2% to O. antarctica. Oleispira ... Its 16S rRNA gene sequences were no more than 90% similar to any other Gammaproteobacteria 16S rRNA gene sequence, and thus ...
*  Infective endocarditis
... and by polymerase chain reaction or and sequencing of bacterial 16S ribosomal RNA. Multiple case reports of infective ...
*  Haemophilus segnis
"Haemophilus Segnis Polymicrobial and Monomicrobial Bacteraemia Identified by 16S Ribosomal RNA Gene Sequencing". Journal of ...
*  Prokaryotic small ribosomal subunit
It is a complex of the 16S ribosomal RNA (rRNA) and 19 proteins. This complex is implicated in the binding of Transfer RNA onto ... Prokaryotic large ribosomal subunit (50S) Ribosomal RNA Antibiotics Schluenzen F, Tocilj A, Zarivach R, Harms J, Gluehmann M, ... doi:10.1016/S0092-8674(00)00216-6. 16S rRNA, BioMineWiki http://pathmicro.med.sc.edu/mayer/antibiot.htm 16S Ribosomal RNA at ... The small ribosomal subunit is made up of 16S rRNA and 19 full proteins. There is also one polypeptide chain that measures in ...
*  S4 protein domain
S4 is a multifunctional protein, and it must bind to the 16S ribosomal RNA. In addition, the S4 domain binds a complex ... In molecular biology, S4 domain refers to a small RNA-binding protein domain found in a ribosomal protein named S4. The S4 ... "The crystal structure of ribosomal protein S4 reveals a two-domain molecule with an extensive RNA-binding surface: one domain ... this protein domain delivers nucleotide-modifying enzymes to RNA and to regulates translation through structure specific RNA ...
*  Halostagnicola larsenii
The 16S ribosomal RNA gene sequence of H. larsenii was studied using ARB software. The neighbor-joining method was used to ... conduct 16s rRNA gene sequence analysis and determine phylogenetic relationships. The closest neighboring species Natrialba ...
*  Spectinomycin
One form of resistance has emerged in the 16S ribosomal RNA in Pasteurella multocida. Biosynthesis of spectinomycin begins ... Kehrenberg C, Schwarz S (June 2007). "Mutations in 16S rRNA and ribosomal protein S5 associated with high-level spectinomycin ...
*  Eukaryote
In the 1970s, Carl Woese explored microbial phylogenetics, studying variations in 16S ribosomal RNA. This helped to uncover the ... "Mitochondrial Genome Evolution and a Novel RNA Editing System in Deep-Branching Heteroloboseids". Genome Biology and Evolution ...
*  Amycolatopsis rifamycinica
Finally, in 2004, it was renamed Amycolatopsis rifamycinica based on 16S ribosomal RNA sequencing. Saxena A, Kumari R, ...
*  Burkholderia kururiensis
Genotypically, studies of 16s ribosomal RNA suggested B. kururiensis belonged to the genus Burkholderia. The G+C total DNA ...
*  Common firecrest
... inferred from mitochondrial 16S ribosomal RNA gene sequences" (PDF). Molecular Phylogenetics and Evolution. 30: 325-335. doi: ...
*  Human Microbiome Project
The microbial genome data were extracted by identifying the bacterial specific ribosomal RNA, 16S rRNA. The researchers ... Stombaugh, J.; Widmann, J.; McDonald, D.; Knight, R. (2011). "Boulder ALignment Editor (ALE): A web-based RNA alignment tool". ... The project also financed deep sequencing of bacterial 16S rRNA sequences amplified by polymerase chain reaction from human ... a web-based RNA alignment tool; WebMGA, a customizable web server for fast metagenomic sequence analysis; and DNACLUST, a tool ...
*  Pectinatus
All-Species Living Tree Project."16S rRNA-based LTP release 111 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA Database ... and the phylogeny is based on 16S rRNA-based LTP release 111 by The All-Species Living Tree Project See the List of Prokaryotic ...
*  Human microbiota
The microbial genome data were extracted by identifying the bacterial specific ribosomal RNA, 16S rRNA. The researchers ... This is done primarily using DNA-based studies, though RNA, protein and metabolite based studies are also performed. DNA-based ...