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*  Metagenomics
Zhu, Wenhan; Lomsadze Alex; Borodovsky Mark (2010). "Ab initio gene identification in metagenomic sequences". Nucleic Acids ... Misassemblies are caused by the presence of repetitive DNA sequences that make assembly especially difficult because of the ... sequences many short sequences, and reconstructs them into a consensus sequence. Shotgun sequencing reveals genes present in ... In contrast, sequence-driven analysis uses conserved DNA sequences to design PCR primers to screen clones for the sequence of ...
*  AP-1 transcription factor
Due to the amino acid sequence and the periodicity of the helices, the leucine side chains are arranged along one face of the α ... and the usefulness of antisense nucleic acids". Biochem. Pharmacol. 50 (4): 435-42. doi:10.1016/0006-2952(95)00068-B. PMID ... characterized by a periodicity of 3.5 residues per turn and repetitive leucines appearing at every seventh position of the ... Retinoic Acid Inhibits Serum-stimulated Activator Protein-1 via ... Inagi R, Miyata T, Nangaku M, et al. (November 2002). " ...
*  Phycodnaviridae
The different amino acid sequences and lack of COOH-terminal cytoplasmic tail make the Kcv protein different from other ... It is suggested that these repetitive sequences may play a role in gene recombination that allows the virus to exchange genetic ... Shuman, Stewart (2000). "Structure, mechanism, and evolution of the mRNA capping apparatus". Progress in Nucleic Acid Research ... EsV-1 encodes a 124 codon ORF that has significant amino acid similarity to PBCV-1 Kcv (41% amino acid identity). However, the ...
*  Somatic genome processing
In ciliates there are two types of diminution: the first is fragmentation of genome and loss of repetitive sequences and the ... Nucleic Acids Research. 27 (5): 1243-1250. ISSN 0305-1048. PMC 148308 . PMID 9973610. Brown, T.A. Genomes 3. pp. 439-441. ISBN ... interrupted by many non-coding DNA sequences, also called internal eliminated (IESs). In the Spirotrichea class, to which ... second is deletion of internally eliminated sequences in chromosomes and the rejoining of remaining DNA fragments. Gene ...
*  Trinucleotide repeat expansion
Due to the repetitive nature of the DNA sequence in these regions, 'loop out' structures may form during DNA replication while ... Nucleic Acids Res. 39 (15): 1-11. doi:10.1093/nar/gkr429. PMC 3177194 . PMID 21666257. McIvor EI, Polak U, Napierala M (2010 ... If the loop out structure is formed from the sequence on the daughter strand this will result in an increase in the number of ...
*  Robin Allshire
"Transcription-coupled changes to chromatin underpin gene silencing by transcriptional interference". Nucleic Acids Res. pii: ... as a postdoctoral researcher where he discovered that mammalian telomeres are composed of simple repetitive sequences similar ... "Sequence features and transcriptional stalling within centromere DNA promote establishment of CENP-A chromatin". PLoS Genet. 11 ...