Loading...
*  DNase footprinting assay
... is compared to the cleavage pattern of DNA in the presence of a DNA binding protein. If the protein binds DNA, the binding site ... By varying the concentration of the DNA-binding protein, the binding affinity of the protein can be estimated according to the ... This makes it possible to locate a protein binding site on a particular DNA molecule. The method uses an enzyme, ... The cleavage pattern of the DNA in the absence of a DNA binding protein, typically referred to as free DNA, ...
*  DNA footprinting
A protein that specifically binds a region within the DNA template will protect the DNA it is bound to from the cleavage agent ... The DNA bound to a protein of interest can be immunoprecipitated with an antibody to that protein, and then specific region ... Thus is more likely to have its action blocked by a bound protein on a DNA sequence. In addition, the DNase I enzyme is easily ... A disadvantage is that the gel can be difficult to interpret, as the bound protein does not protect the DNA, it merely alters ...
*  Protein primary structure
The phosphorylated tyrosines are often used as "handles" by which proteins can bind to one another, whereas phosphorylation of ... Functionally, however, the acetylation of lysine residues is used to regulate the binding of proteins to nucleic acids. The ... Protein primary structure is the linear sequence of amino acids in a peptide or protein. By convention, the primary structure ... The protein is activated by cleaving off the inhibitory peptide. Some proteins even have the power to cleave themselves. ...
*  Plasma protein binding
Quantum Plasma Protein Binding S+ Plasma Protein Binding Albumin binding prediction Blood proteins Pharmacokinetics Shargel, ... of the plasma proteins are bound with drug, however. Protein binding can influence the drug's biological half-life. The bound ... A drug that is 99% bound means that 99% of the drug molecules are bound to blood proteins not that 99% of the blood proteins ... assume that Drug A and Drug B are both protein-bound drugs. If Drug A is given, it will bind to the plasma proteins in the ...
*  Protein-bound paclitaxel
... , also known as nanoparticle albumin-bound paclitaxel or nab-paclitaxel, is an injectable formulation ... "Definition of "protein-bound paclitaxel"". National Cancer Institute Dictionary of Cancer Terms. "FDA approves Celgene's ... Stinchcombe, Thomas E (2007). "Nanoparticle albumin-bound paclitaxel: a novel Cremphor-ELĀ®-free formulation of paclitaxel". ... Gradishar, William J (2006). "Albumin-bound paclitaxel: a next-generation taxane". Expert Opinion on Pharmacotherapy. 7 (8): ...
*  Vimentin 3' UTR protein-binding region
UTR protein-binding region is an RNA element that contains a Y shaped structure which has been shown to have protein binding ... Page for Vimentin 3' UTR protein-binding region at Rfam Transterm page for Vimentin Localisation Element. ... The identity of the proteins involved and the localisation mechanism are not known. Zehner, ZE; Shepherd RK; Gabryszuk J; Fu TF ... Al-Ali M; Holmes WM (1997). "RNA-protein interactions within the 3 ' untranslated region of vimentin mRNA". Nucleic Acids Res. ...
*  Alfalfa mosaic virus coat protein binding (CPB) RNA
The Alfalfa mosaic virus (AMV) coat protein binding (CPB) RNA is an RNA element which is found in the 3' UTR of the genome. AMV ... This family contains at least two coat protein binding sites which are thought to be essential for efficient RNA translation. ... Page for Alfalfa mosaic virus coat protein binding (CPB) RNA at Rfam. ... "Efficient translation of alfamovirus RNAs requires the binding of coat protein dimers to the 3' termini of the viral RNAs". J ...
*  Binding protein
DNA-binding protein Single-strand binding protein Telomere-binding protein RNA-binding protein Poly(A)-binding protein Nuclear ... binding protein Syntaxin binding protein 2 Oxysterol-binding protein E3 binding protein Iron-responsive element-binding protein ... cap-binding protein complex CREB-binding protein Calcium-binding protein Calcium-binding protein 1 S100 calcium-binding protein ... C4b-binding protein Rap GTP-binding protein Calmodulin-binding proteins Iron-binding proteins Thyroxine-binding proteins Folate ...
*  Emopamil binding protein
EBP refers to "emopamil binding protein". emopamil Guggenberger C, Ilgen D, Adamski J (May 2007). "Functional analysis of ... Happle Syndrome EBP protein, human at the US National Library of Medicine Medical Subject Headings (MeSH). ...
*  Branchpoint Binding Protein
... (BBP) is a Orem RNA processing factor. The protein complex binds to the branchpoint sequence (BPS) ... The BPS that the protein binds to in yeast is UACUAAC. "BBP Involved in Splice Site Recognition". Archived from the original on ... Rymond, B. C. (2010). "The branchpoint binding protein: in and out of the spliceosome cycle". Adv Exp Med Biol. 693: 123-41. ... The role of the protein in yeast cells has been the subject of study, as for other eukaryotic cells. ...
*  Retinol-binding protein
Retinol-binding proteins (RBP) are a family of proteins with diverse functions. They are carrier proteins that bind retinol. ... Plasma retinol-binding protein, the retinol transport vehicle in serum. CRBP I/II, cellular-binding proteins involved in ... MacDonald, P.N.; Bok, D.; Ong, D.E. (1990). "Localization of cellular retinol-binding protein and retinol-binding protein in ... Assessment of retinol-binding protein is used to determine visceral protein mass in health-related nutritional studies. Retinol ...
*  Actin-binding protein
Actin-binding proteins (also known as ABP) are proteins that bind to actin. This may mean ability to bind actin monomers, or ... This is a list of actin-binding proteins in alphabetical order. List: 0-9 A B C D E F G H I J K L M N O P Q R S T U V W x Y Z ... Zipper protein Zo-1 Zyxin Cytoskeletal drugs dos Remedios CG, Chhabra D, Kekic M, et al. (April 2003). "Actin binding proteins ... Mayven Myelin basic protein Naphthylphthalamic acid binding protein (NPA) N-RAP Nebulin N-WASP Neurabin Nullo Neurexins ...
*  Acrosin binding protein
... is a protein that in humans is encoded by the ACRBP gene. The protein encoded by this gene is similar ... This protein is located in the sperm acrosome and is thought to function as a binding protein to proacrosin for packaging and ... Acrosin binding protein". Retrieved 2016-08-01. Okumura H, Noguchi Y, Uenaka A, Aji T, Ono T, Nakagawa K, Aoe M, Shimizu N, ... This protein is a member of the cancer/testis family of antigens and it is found to be immunogenic. In normal tissues, this ...
*  Lipopolysaccharide binding protein
... is a protein that in humans is encoded by the LBP gene. LBP is a soluble acute-phase protein ... 1994). "Bactericidal/permeability-increasing protein and lipopolysaccharide (LPS)-binding protein. LPS binding properties and ... Sato M, Saeki Y, Tanaka K, Kaneda Y (1999). "Ribosome-associated protein LBP/p40 binds to S21 protein of 40S ribosome: analysis ... 2000). "Lipopolysaccharide-Binding Protein and Phospholipid Transfer Protein Release Lipopolysaccharides from Gram-Negative ...
*  Auxin binding protein
In molecular biology, the auxin binding protein family is a family of proteins which bind auxin. They are located in the lumen ... Palme K, Hesse T, Campos N, Garbers C, Yanofsky MF, Schell J (February 1992). "Molecular analysis of an auxin binding protein ... 2002). "Crystal structure of auxin-binding protein 1 in complex with auxin". EMBO J. 21 (12): 2877-85. doi:10.1093/emboj/cdf291 ... which could represent a signal for translocation of the protein to the ER. The mature protein comprises around 165 residues, ...
*  Oxysterol-binding protein
... 1 - Homo sapiens (Human) - OSBP gene & protein". www.uniprot.org. "OSBP2 - Oxysterol-binding protein ... protein". www.uniprot.org. "OSBPL2 - Oxysterol-binding protein-related protein 2 - Homo sapiens (Human) - OSBPL2 gene & protein ... protein". www.uniprot.org. "OSBPL5 - Oxysterol-binding protein-related protein 5 - Homo sapiens (Human) - OSBPL5 gene & protein ... protein". www.uniprot.org. "OSBPL7 - Oxysterol-binding protein-related protein 7 - Homo sapiens (Human) - OSBPL7 gene & protein ...
*  Folate-binding protein
... (FBP) are proteins that bind folate, typically the folate receptors and reduced folate carrier. It can ... www.scrippslabs.com/enzymes-biochemicals-folate-binding-protein/. ... "Folate-binding Protein Is a Marker for Ovarian Cancer". 1991. http://www.marketwatch.com/story/galena-biopharma-to-present-at- ... FBP can refer to protein(s) (e.g. extracted from cow's milk) used to do folic acid assays. "The role of folate receptor a in ...
*  C4b-binding protein
Outer membrane protein A from E. coli, Ubiquitous surface protein 1 and 2 from Moraxella. Complement C4b-Binding Protein at the ... C4b-binding protein (C4BP) is a protein involved in the complement system where it acts as inhibitor. C4BP has an octopus-like ... proline arginine-rich end leucine-rich repeat protein (PRELP), streptococcal M-proteins, gonococcal porins, ... C4BP binds apoptotic and necrotic cells as well as DNA, to clean up after injury. The interaction with apoptotic and necrotic ...
*  Immunoglobulin-binding protein
... 1 (IGBP1), a protein that binds B-cells in the blood. Protein A, a 42 kDa protein originally ... Immunoglobulin-binding protein, or sometimes Immunoglobulin binding protein is a generic name for any protein that binds ... It, therefore, can mean: Binding immunoglobulin protein (BiP, or heat shock 70 kDa protein 5, with an official symbol HSPA5), a ... Protein G, expressed in group C and G Streptococcal bacteria much like Protein A. Protein L, isolated from the surface of a ...
*  Telomere-binding protein
In particular, telomere-binding protein refers to TTAGGG repeat binding factor-1 (TRF1) and TTAGGG repeat binding factor-2 ( ... Telomere-binding proteins can generate a T-loop to protect chromosome ends. TRFs are double-stranded proteins which are known ... The DNA-binding proteins include TRF1, TRF2, and POT1, which have specific sequences, altering binding affinity or regulatory ... Telomere-binding proteins (also known as TERF, TRBF, TRF) function to bind telomeric DNA in various species. ...
*  Guanylate-binding protein
Structure of human guanylate-binding protein 1 representing a unique class of GTP-binding proteins. Nature. 2000 Feb 3;403(6769 ... Guanylate-binding proteins (GBP) fall into the last class. In humans, there are seven GBPs (hGBP1-7). Structurally, hGBP1 ... In molecular biology, the guanylate-binding protein family is a family of GTPases that is induced by interferon (IFN)-gamma. ... "Human guanylate binding protein-1 is a secreted GTPase present in increased concentrations in the cerebrospinal fluid of ...
*  TATA-binding protein
Sp1 and cAMP-response-element-binding protein-binding protein (CBP/p300)". Biochem. J. 339 (3): 751-8. doi:10.1042/0264-6021: ... The TATA-binding protein (TBP) is a general transcription factor that binds specifically to a DNA sequence called the TATA box ... Type 17 Interactive TBP Structure at massey.ac.nz PDB Molecule of the Month TATA-binding protein TATA-Box Binding Protein at ... gene is mediated by interactions of Msx1 protein with a multi-protein transcriptional complex containing TATA-binding protein, ...
*  CREB-binding protein
... , also known as CREBBP or CBP, is a protein that in humans is encoded by the CREBBP gene. The CREB protein ... CREB-binding protein has been shown to interact with: TF2, AR, AIRE, BRCA1, C-jun, CSK, Ccaat-enhancer-binding proteins, CDX2, ... First isolated as a nuclear protein that binds to cAMP-response element-binding protein (CREB), this gene is now known to play ... Zhang Q, Vo N, Goodman RH (July 2000). "Histone binding protein RbAp48 interacts with a complex of CREB binding protein and ...
*  E3 binding protein
... also known as pyruvate dehydrogenase protein X component, mitochondrial is a protein that in humans is ... E3 binding protein (E3BP). This gene encodes the E3 binding protein subunit; also known as component X of the pyruvate ... The protein encoded by the human PDHX gene, also known as E3 binding protein (E3BP), is part of the pyruvate dehydrogenase ... "How dihydrolipoamide dehydrogenase-binding protein binds dihydrolipoamide dehydrogenase in the human pyruvate dehydrogenase ...
*  Maltose-binding protein
N-Terminal Fusion of Target Protein to Maltose-Binding Protein at Michigan Technological University maltose-binding protein at ... The fusion protein binds to amylose columns while all other proteins flow through. The MBP-protein fusion can be purified by ... Ferenci, T; Randall, LL (1979). "Precursor maltose-binding protein is active in binding substrate". J Biol Chem. 254 (20): 9979 ... In these systems, the protein of interest is often expressed as a MBP-fusion protein, preventing aggregation of the protein of ...
*  UCKL1
2002). "Epstein-Barr virus encoded nuclear protein EBNA-3 binds a novel human uridine kinase/uracil phosphoribosyltransferase ... 2006). "A probability-based approach for high-throughput protein phosphorylation analysis and site localization". Nat. ...
*  DNA-binding protein
A distinct group of DNA-binding proteins are the DNA-binding proteins that specifically bind single-stranded DNA. In humans, ... DNA-binding proteins are proteins composed of DNA-binding domains and thus have a specific or general affinity for either ... Other non-specific DNA-binding proteins in chromatin include the high-mobility group (HMG) proteins, which bind to bent or ... Structural proteins that bind DNA are well-understood examples of non-specific DNA-protein interactions. Within chromosomes, ...