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*  Stepwise mutation model
... resulting in both individuals with identical number of microsatellite repeats (that is, 10 repeats for a particular locus). ... Given the underlying assumptions of the SMM, it has been widely adopted for use with microsatellite markers that contain repeat ... For example, individual A might have gained a single additional repeat (from an ancestor who had 9) whereas individual B might ... Ellegren, H.(2004) Microsatellites: Simple Sequences with Complex Evolution. Nature Reviews Genetics. 5: 435-445. Laval, G., ...
*  Eukaryotic chromosome fine structure
Short repeats of nucleotides. Microsatellite: Very short repeats of nucleotides. Some trinucleotide repeats are found in coding ... Repeated sequences are of two basic types: unique sequences that are repeated in one area; and repeated sequences that are ... This region is a microsatellite, but its function is more specific than a simple tandem repeat. Throughout the eukaryotic ... They can be classified based on the length of the repeat as: SINE: Short interspersed sequences. The repeats are normally a few ...
*  Microsatellite enrichment
This can be achieved by designing oligonucleotide probes that hybridize with the repeats in the microsatellites and then pull ... Microsatellite enrichment is a method in molecular biology used for enriching the amount of microsatellite sequences in a DNA ... Jennings, TN; Knaus, BJ; Mullins, TD; Haig, SM; Cronn, RC (2011-06-16). "Multiplexed microsatellite recovery using massively ... Kaukinen KH, Supernault KJ, Miller KM (2004). "Enrichment of tetranucleotide microsatellite loci from invertebrate species". ...
*  Simple sequence length polymorphism
SSLPs are repeated sequences over varying base lengths in intergenic regions of deoxyribonucleic acid (DNA). Variance in the ... An example of the usage of SSLPs (microsatellites) is seen in a study by Rosenberg et al., where SSLPs were used to cluster ...
*  Albert Erives
A third-related finding is that frequent selection for different responses also enriches for microsatellite repeat tracts, ... His lab's work also elucidated how a mutational mechanism (microsatellite repeat slippage) plays a significant evolutionary ... Brittain, A; Stroebele, E; Erives, A (2015). "Microsatellite repeat instability fuels evolution of embryonic enhancers in ... As indels are largely produced by unstable microsatellite repeats, which are fast-evolving and difficult to genotype accurately ...
*  Trinucleotide repeat disorder
The mutation is a subset of unstable microsatellite repeats that occur throughout all genomic sequences. If the repeat is ... Trinucleotide repeat disorders (also known as trinucleotide repeat expansion disorders, triplet repeat expansion disorders or ... as are larger repeats (e.g. VNTRs - Variable Number Tandem Repeats). One possibility is that repeats that are not a multiple of ... is also capable of binding CAG repeats. Furthermore, when the CAG repeat was changed to a repeating series of CAACAG (which ...
*  Vasopressin receptor 1A
However, there is no evidence of preferential transmission of AVPR1A microsatellite repeats to hypersexual or uninhibited ... The AVPR1A repeat polymorphism RS3 is a complex (CT)4-TT-(CT)8-(GT)24 repeat that is 3625 bp upstream of the transcription ... The AVPR1A repeat polymorphism RS1 is a (GATA)14 tetranucleotide repeat that is 553 bp upstream from the transcription start ... Chimpanzees populations have individuals with single (only (GT)25 microsatellite) and duplicated (the (GT)25 microsatellite as ...
*  Balai Penelitian Ternak, Ciawi, Bogor
2001.Characterization of duck microsatellite repeat sequences. JARQ 35(4): 217-219. (in Indonesian) Sari L, Purwadaria T. 2004 ...
*  ST7
Zenklusen JC, Bi├Ęche I, Lidereau R, Conti CJ (December 1994). "(C-A)n microsatellite repeat D7S522 is the most commonly deleted ...
*  Snptstr (database)
SNPSTR is a database of Snpstrs (a microsatellite with one or more tightly linked SNPs). Snpstr Short tandem repeat ... a database of compound microsatellite-SNP markers". Nucleic Acids Res. England. 35 (Database issue): D71-5. doi:10.1093/nar/ ... Microsatellite Single-nucleotide polymorphism Agrafioti, I; Stumpf M P H (Jan 2007). "SNPSTR: ...
*  FGR (gene)
Patel MS, Mankoo BS, Brickell PM (Apr 1992). "A polymorphic microsatellite repeat is located close to the promoter region of ...
*  Microsatellite instability
Microsatellites are also known as simple sequence repeats (SSRs). Microsatellite instability structure consists of repeated ... Microsatellites are repeated sequences of DNA. These sequences can be made of repeating units of one to six base pairs in ... each individual has microsatellites of a set length. The most common microsatellite in humans is a dinucleotide repeat of the ... The majority of repeats occur in untranslated regions, specifically introns. However, microsatellites that occur in coding ...
*  Surfactant protein C
1995). "Mapping of the pulmonary surfactant SP5 (SFTP2) locus to 8p21 and characterization of a microsatellite repeat marker ...
*  Satellite DNA
Between the strand-biased microsatellite repeats and G:C mononucleotide repeats, all sequence variations retained one or two ... The most prevalent repeated sequences in the embedded microsatellite regions were CCT:AGG, CTT:AAG, CTTT:AAAG, and CCCT:AGGG. ... Variations among cloned RU sequences were characterized by the number of microsatellite repeats, and also by the lengths of C ... Four divergent domains consisted of microsatellite repeats biased in composition with purines on one strand and pyrimidines on ...
*  Microsatellite
JSTRING - Java Search for Tandem Repeats in genomes Microsatellite repeats finder MISA - MIcroSAtellite identification tool ... Microsatellites are often referred to as short tandem repeats (STRs) by forensic geneticists, or as simple sequence repeats ( ... Microsatellite mutation rates vary with base position relative to the microsatellite, repeat type, and base identity. Mutation ... microsatellite mutations lead to the gain or loss of an entire repeat unit, and sometimes two or more repeats simultaneously. ...
*  PRRC2A
This gene has microsatellite repeats which are associated with the age-at-onset of insulin-dependent diabetes mellitus (IDDM) ...
*  List of MeSH codes (G14)
... dna repeat expansion MeSH G14.340.024.850.150 --- dna, satellite MeSH G14.340.024.850.500 --- microsatellite repeats MeSH ... trinucleotide repeat expansion MeSH G14.080.708.800.150 --- dna, satellite MeSH G14.080.708.800.500 --- microsatellite repeats ... minisatellite repeats MeSH G14.080.708.850 --- terminal repeat sequences MeSH G14.080.708.850.400 --- hiv long terminal repeat ... dna repeat expansion MeSH G14.340.024.189.220.865 --- trinucleotide repeat expansion MeSH G14.340.024.189.610 --- chromosome ...
*  Constitutive heterochromatin
... minisatellite and microsatellite repeats, and transposon repeats. In humans these regions account for about 200Mb or 6.5% of ... Constitutive heterochromatin is composed mainly of high copy number tandem repeats known as satellite repeats, ... The repeat sequences found at the pericentromeres are not conserved throughout many species and depend more on epigenetic ... The Y chromosome has been fully sequenced: its repeats do not interfere with finding the overlapping regions that are needed ...
*  BAT2
This gene has microsatellite repeats which are associated with the age-at-onset of insulin-dependent diabetes mellitus (IDDM) ... 2002). "New polymorphic microsatellite markers in the human MHC class III region". Tissue Antigens. 57 (5): 397-404. doi: ... 2000). "Genetic contribution of the BAT2 gene microsatellite polymorphism to the age-at-onset of insulin-dependent diabetes ... "A gene pair from the human major histocompatibility complex encodes large proline-rich proteins with multiple repeated motifs ...
*  List of MeSH codes (G06)
... microsatellite repeats MeSH G06.184.603.080.708.800.500.150 --- dinucleotide repeats MeSH G06.184.603.080.708.800.500.850 --- ... terminal repeat sequences MeSH G06.184.603.080.708.850.400 --- hiv long terminal repeat MeSH G06.184.603.080.708.850.400.400 ... tandem repeat sequences MeSH G06.184.603.080.708.800.140 --- dna repeat expansion MeSH G06.184.603.080.708.800.140.865 --- ... trinucleotide repeats MeSH G06.184.603.080.708.800.500.850.200 --- trinucleotide repeat expansion MeSH G06.184.603.080.708.800. ...
*  FASTA
This might be problematic as when the query sequence contains such regions, e.g. mini- or microsatellites repeating the same ... this increases the score of not familiar sequences in the database which only match in this repeats, which occur quite ...
*  Non-Mendelian inheritance
These diseases are all caused by the expansion of microsatellite tandem repeats consisting of a stretch of three nucleotides. ... Prominent trinucleotide repeat disorders include Fragile X syndrome and Huntington's disease. In the case of Fragile X syndrome ... Individuals with a number of repeats that falls in the premutation range have a good chance of having affected children. Those ... With each successive generation, there is a chance that the number of repeats will expand. As this occurs, progeny can progress ...
*  Slipped strand mispairing
Genomic regions with a high proportion of repeated DNA sequences (tandem repeats, microsatellites) are prone to strand slippage ... In long repeats, expansions may involve two or more units. For example, insertion of a single repeat unit in GAGAGA expands the ... For example, a transversion could change the simple two- base repeat [GA]10 to [GA]4GATA[GA]2. This could then be expanded to[ ... The combination of SSM events with point mutation is thought to account for the evolution of more complex repeat units. ...
*  Centre for Cellular and Molecular Biology
Discovered the functionality of microsatellites (simple sequence repeats) among non-coding DNA. Discovered the gene CPA1, which ...
*  Minisatellite
... and microsatellites are often referred to as short tandem repeats (STRs) or simple sequence repeats (SSRs). Minisatellites ... Microsatellite Tandem repeat Telomere Minisatellite at the US National Library of Medicine Medical Subject Headings (MeSH) ... Repeat turnover therefore appears to be controlled by recombinational activity in DNA that flanks the repeat array and results ... and that was subsequently identified as large centromeric tandem repeats. When shorter (10-30-bp) tandem repeats were later ...
*  Eulaema meriana
Males repeat cycles of patrolling and perching as long as the male remained in the territory and was not disturbed by other ... "Isolation and cross-species characterization of polymorphic microsatellites for the orchid bee Eulaema meriana (Hymenoptera: ...
*  K-mer
Smaller k-mers also have the problem of not being able to resolve areas in the DNA where small microsatellites or repeats occur ... This is because most of the k-mers will sit in the repeated region and may just be discarded as repeats of the same k-mer ... Larger k-mer sizes help alleviate the problem of small repeat regions. This is due to the fact that the k-mer will contain a ... This is because smaller k-mers will tend to sit entirely within the repeat region and is therefore hard to determine the amount ...