Loading...
*  Mitochondrial DNA
... "mtDNA Segregation in Heteroplasmic Tissues Is Common In Vivo and Modulated by Haplotype Differences and Developmental Stage". ...
*  Transmission disequilibrium test
The Blackwelder and Elston approach uses the total number of haplotypes identical by descent (mean haplotype sharing). This ...
*  Molecular phylogenetics
Any group of haplotypes that are all more similar to one another than any of them is to any other haplotype may be said to ... Haplotypes of individuals of closely related, but different, taxa are also determined. Finally, haplotypes from a smaller ... The base sequences for the haplotypes are then compared. In the simplest case, the difference between two haplotypes is ... The particular sequence found in a given organism is referred to as its haplotype. In principle, since there are four base ...
*  Tag SNP
This measure is suitable only for haplotype blocks with limited haplotype diversity and it is not clear how to use it for large ... When a disease is found to be associated with a haplotype, some SNPs in that haplotype will have synthetic association with the ... Therefore tag SNPs are representative of all SNPs within a haplotype. The selection of tag SNPs is dependent on the haplotypes ... By mapping the entire genome to haplotypes, tag SNPs can be identified to represent the haplotype blocks examined by genetic ...
*  HLA-DQ1
DQA1*0101 is commonly linked to haplotypes of DQB1*05, the common DQA1*0101:DQB1*0501 haplotype which is part of a broader DR1- ... Another haplotype, DR8-DQ1 which contains this haplotype may be associated with primary biliary cirrhosis, Grave's disease ... DQB1*0601 haplotype, and in Europe with the *0103:DQB1*0603 haplotype, indicating the protective effect is influenced by the ... HLA-DQ1 is a serotype that covers a broad range of HLA-DQ haplotypes. Historically it was identified as a DR-like alpha chain ...
*  Haplotype
... haplotype estimation and haplotype tagging (Homepage). HelixTree - Haplotype analysis software - Haplotype Trend Regression ( ... Haplotype diversity is a measure of the uniqueness of a particular haplotype in a given population. The haplotype diversity (H ... Given the genotypes for a number of individuals, the haplotypes can be inferred by haplotype resolution or haplotype phasing ... haplotype frequency of each haplotype in the sample and N {\displaystyle N} is the sample size. Haplotype diversity is given ...
*  Haplotype convergence
... is the unrelated appearance of identical haplotypes in separate populations, through either convergent ... Haplotype convergence is rare, due to the sheer odds involved of two unrelated individuals independently evolving the exact ... Thus, haplotypes are shared mainly between very closely related individuals, as the genetic information in two related ... "Common haplotypes". ancestry.com. 14 December 2006. Retrieved 28 March 2012. [better source needed] Blair, C.; Murphy, R. W. ( ...
*  Haplotype estimation
In genetics, haplotype estimation (also known as "phasing") refers to the process of statistical estimation of haplotypes from ... List of haplotype estimation and genotype imputation software imputation: predict missing genotypes using known haplotypes ... Approximations to the distribution of a haplotype conditional upon a set of other haplotypes were used for the conditional ... These methods iteratively update the haplotype estimates of each sample conditional upon a subset of K haplotype estimates of ...
*  Haplotype 35
In human genetics, Haplotype 35, also called ht35 or the Armenian Modal Haplotype, is a Y chromosome haplotype of Y-STR ... Modal haplotype Haplotype Haplogroup Haplogroup R1b List of Y-STR markers Haplogroup R1b (Haplotype 35). ... It is characterized by DYS393=12 (as opposed to the Atlantic Modal Haplotype, another R1b haplotype, which is characterized by ... DYS393=13). The members of this haplotype are found in high numbers in Anatolia and Armenia, with smaller numbers throughout ...
*  Modal haplotype
The two most commonly discussed modal haplotypes are the Atlantic Modal Haplotype (the most common haplotype in parts of Europe ... A modal haplotype is an ancestral haplotype derived from the DNA test results of a specific group of people, using genetic ... the haplotype associated with the Jewish Cohanim tradition). However, a specific modal haplotype may be determined for any ... associated with Haplogroup R1b) and the Cohen Modal Haplotype ( ...
*  Atlantic modal haplotype
Modal haplotype Haplotype Haplogroup Haplogroup R1b List of Y-STR markers Some Haplotype Definitions Some Variations of DYS390 ... In human genetics, the Atlantic modal haplotype (AMH) or haplotype 15 is a Y chromosome haplotype of Y-STR microsatellite ... One mutation in either direction, would be AMH 1.15+. The AMH 1.15 set of haplotypes is also referred to as the Atlantic modal ... It corresponds most closely with subclade R1b1a2a1a(1) [L11]. The AMH is the most frequently occurring haplotype amongst human ...
*  Preimplantation genetic haplotyping
A haplotype map is thus created, not only exhibiting genes the offspring will contain, but also the parental origin of the ... "Developing a Haplotype Map of the Human Genome to Find Genes Related to Health and Disease: Meeting Summary". www.genome.gov. ... Preimplantation genetic haplotyping (PGH) is a clinical method of preimplantation genetic diagnosis (PGD) used to determine the ... Altarescu G, Zeevi DA, Zeligson S, Perlberg S, Eldar-Geva T, Margalioth EJ, Levy-Lahad E, Renbaum P. Familial haplotyping and ...
*  Microfluidic whole genome haplotyping
Whole genome haplotyping is the process of resolving personal haplotypes on a whole genome basis. Current methods of next ... Whole genome direct haplotyping involves the resolution of haplotype at the whole genome level, usually through the isolation ... Most molecular biology techniques for haplotyping can accurately determine haplotypes of only a limited region of the genome. ... Haplotypes have no defined size and can refer to anything from a few closely linked loci up to an entire chromosome. The term ...
*  HLA A1-B8 haplotype
In Europe A1-B8 is found, generally as part of the HLA A1-B8-DR3-DQ2 haplotype. This haplotype is 4.7 million nucleotides in ... Underlying this move was the HLA A1-B8-DR3-DQ2 haplotype, a haplotype that is in acute linkage disequilibrium in the European ... A multigene haplotype is set of inherited alleles covering several genes, or gene-alleles; common multigene haplotypes are ... Two-point haplotype analysis between TNFB(B*01 allele) and HLA show that the allele is in linkage disequilibrium with HLA-A1, ...
*  Y Chromosome Haplotype Reference Database
By October 2017 more than 197,000 9-locus haplotypes, among them 145,816 17-locus haplotypes, 39,414 23-locus haplotypes, ... The analysis of ~12,000 European Haplotypes by AMOVA demonstrates that three largely homogeneous pools of European Haplotypes ... the generation of reliable frequency estimates for Y-STR Haplotypes and Y-SNP Haplotypes to be used in the quantitative ... Haplotypes within a haplogroup could be highly similar or even "identical by descent" (IBD). In thus, the haplogroup could be ...
*  A30-Cw5-B18-DR3-DQ2 (HLA Haplotype)
The CwB haplotype peaks in Sardinia along with the rest of the haplotype and can be found in high resolution studies of the S. ... There are other haplotypes that have similar origins (e.g. A2-Cw7-B58-DR16-DQ5.2) and combined these haplotypes represent ... Long haplotypes, like A30::DQ2, are generally the result of descent by common ancestry. As haplotypes increase in size, ... Excepting A*3002:Cw*0501:B*1801 haplotype, A*3002, the A30 allele found in the A30-Cw5-B18 haplotype, is rare in Europe. ...
*  List of haplotype estimation and genotype imputation software
This is a list of notable software for haplotype estimation and genotype imputation. Alphabetical order: AlphaImpute Beagle ...
*  Family Tree DNA
Their haplotypes matched perfectly. Gibbens, Pam (April 2006). "Talk of The Town - At Familytree DNA, it's all Relative". ... Michael Hammer (PhD), one of a team of scientists that first published on the Cohen Modal Haplotype in 1997 in the journal ... Family Tree DNA became widely known for its Y-chromosome STR testing for the Cohen Modal Haplotype. Soon, they were offering ...
*  Genealogical DNA test
... with Y-STR values clustered unusually closely around a haplotype known as the Cohen Modal Haplotype (CMH). This could be ... This mtDNA haplotype test was popularized in the book The Seven Daughters of Eve. Genealogical DNA tests have become popular ... Their haplotypes matched perfectly. Lomax, John Nova (April 14, 2005). "Who's Your Daddy?". Houston Press. Retrieved June 14, ... "Extended Y chromosome haplotypes resolve multiple and unique lineages of the Jewish priesthood". Human Genetics. 126 (5): 707- ...
*  Genetic genealogy
Their haplotypes matched perfectly. Lomax, John Nova (April 14, 2005). "Who's Your Daddy?". Houston Press. Retrieved June 14, ... "The impact of additional Y-STR loci on resolving common haplotypes and closely related individuals". Forensic Science ... Citizen science Electropherogram Family name Genealogical DNA test Genealogy Genetic recombination Haplogroup Haplotype Human ...
*  Haplogroup J (Y-DNA)
Some J-M172 haplotypes (as well as some J-M267 ones) belong to the "Cohen Modal Haplotype". In South Asia, J2-M172 was found to ... 2001, see Modal Haplotypes of "J1" (as Eu10) Sanchez, Juan J; Hallenberg, Charlotte; Børsting, Claus; Hernandez, Alexis; Gorlin ... Moreover, the network analysis of J-P58 haplotypes shows that some of the populations with low diversity, such as Bedouins from ... Jobling, Mark A.; Tyler-Smith, Chris (2000). "New uses for new haplotypes". Trends in Genetics. 16 (8): 356-62. doi:10.1016/ ...
*  Self-incompatibility
"The S haplotype-specific F-box protein gene, SFB, is defective in self-compatible haplotypes of Prunus avium and P. mume". ... The units are called S-haplotypes. The translation products of the two regions of the S-locus are two proteins which, by ... However, when a female determinant interacts with a male determinant of a different haplotype, no SI is created, and ... There are possibly up to 100 polymorphs of the S-haplotype in Brassica, and within these there is a dominance hierarchy. The ...
*  HLA-DQ6
There are many haplotypes of DQ6. DQB1*0601 is generally linked to DQA1*0103 as 6.1 haplotype. This haplotype is more common in ... This haplotype is considered to be the longest multigene haplotype known within the human genome as it covers over 4.7 million ... The DR15-DQ6.2 haplotype is the most common DR-DQ haplotype in Europe, and approximately 30% of Americans carry at least DQ6.2 ... This haplotype is found at its highest Eurasian frequencies in Japan. DQB1*0609 is found in Africa and proximal regions of ...
*  Chang Yi Wang
Molecular diversity of HLA-DR4 haplotypes. Proc Natl. Acad Sci USA 1986; 83: 2642. 35. Rinnooy-Kan EA, Wright SD, Welte K and ... Molecular analysis of HLA class genes in two DR6w-related haplotypes, DRw13 DQw1 and DRw14 DQw3. J Immunol 1989; 142: 1743. 29 ...
*  Onge
The Andaman M4 haplotype ... is still present among populations in India, suggesting it was subject to the late Pleistocene ... it is possible that the haplotypes have become extinct in India or are present at a low frequency and have not yet been sampled ... The Andamanese M2 contains two haplotypes ... developed in situ, after an early colonization ... Alternatively, ...