Advantages over 16S rRNA amplicon sequencing are: not being limited to bacteria; strain-level classification where amplicon ... sequencing only gets the genus; and the possibility to extract whole genes and specify their function as part of the metagenome ...

The genes were named hgcA through hgcG ("high GC"). It was later identified as Pab40 H/ACA snoRNA with rRNA targets. HgcC ... The genes from this screen were named hgcA through hgcG ("high GC"). HgcG is of unknown function. hgcG is significantly similar ... The HgcG RNA gene is a non-coding RNA that was identified computationally and experimentally verified in AT-rich ... family RNA HgcE RNA HgcF RNA Klein RJ, Misulovin Z, Eddy SR (May 2002). "Noncoding RNA genes identified in AT-rich ...

"Robertsonian translocation 13/14 associated with rRNA genes overexpression and intellectual disability". Egyptian Journal of ... Hartwell, Leland (2011). Genetics From Genes to Genomes, 4e (4 ed.). New York: McGraw-Hill. pp. 443, 454. ISBN 9780073525266. ...

Wright AG (June 2006). "Phylogenetic relationships within the order Halobacteriales inferred from 16S rRNA gene sequences". ... branching pattern of various phylogenetic trees constructed from several different datasets of conserved proteins and 16S rRNA ...

The genes were named hgcA through hgcG ("high GC"). It was later identified as Pab35 H/ACA snoRNA with rRNA targets. HgcC ... The HgcF RNA gene is a non-coding RNA identified computationally and experimentally verified in AT-rich hyperthermophiles. ... family RNA HgcE RNA HgcG RNA SscA RNA Klein RJ, Misulovin Z, Eddy SR (May 2002). "Noncoding RNA genes identified in AT-rich ...

In the case of ribosomal RNAs (rRNA), they are often transcribed as a pre-rRNA that contains one or more rRNAs. The pre-rRNA is ... A facultative gene is a gene only transcribed when needed as opposed to a constitutive gene. An inducible gene is a gene whose ... Gene expression is the process by which information from a gene is used in the synthesis of a functional gene product that ... rRNA) genes. RNA polymerase II (Pol II) transcribes all protein-coding genes but also some non-coding RNAs (e.g., snRNAs, ...

... rRNA). U73 has been demonstrated to function as a 2'-O-ribose methylation guide RNA for pre-28S rRNA. Galardi S, Fatica A, ... is encoded within the introns of the human and mouse ribosomal protein S3a genes". Gene. 210 (2): 255-63. doi:10.1016/S0378- ... Rebane A, Roomere H, Metspalu A (2002). "Locations of several novel 2'-O-methylated nucleotides in human 28S rRNA". BMC ...

This RNA guides the 2'-O-methylation of 18S rRNA. In yeast this snoRNA is found to reside in an intron of the IMD4 gene. This ...

rRNA gene primers were used to test Neobodo's global distribution and genetic diversity. The non-overlap between environmental ... of different rRNA gene sequences of free-living Neobodo species globally. Some of the species identified to date are: Neobodo ... Ultrastructure and SSU rRNA Gene Sequence of a New Freshwater Flagellate, Neobodo borokensis n. sp. (Kinetoplastea, Excavata). ...

"Phylogenetic Reconstruction of the Felidae Using 16S rRNA and NADH-5 Mitochondrial Genes". Journal of Molecular Evolution. 44 ( ... The domestic cat genes MC1R and ASIP allow for the variety of color in coats. The feline ASIP gene consists of three coding ... Wildcats of Egypt contributed to the maternal gene pool of the domestic cat at a later time. The earliest known evidence for ... Three novel microsatellite markers linked to ASIP were isolated from a domestic cat BAC clone containing this gene and were ...

and Hippopus hippopus in the Philippines using mitochondrial CO1 and 16S rRNA genes". {{cite journal}}: Cite journal requires , ...

"Compensatory substitutions and the evolution of the mitochondrial 12S rRNA gene in mammals". Molecular Biology and Evolution. ... The Msx2 gene associated with hair follicle maintenance is also linked to the closure of the parietal eye in mammals, ... Mammals are metagenomic, in that they are composed of not only their own genes, but also those of all of their associated ... Molecular phylogenetics uses features of organisms' genes to work out family trees in much the same way as paleontologists do ...

Wong AC, Chaston JM, Douglas AE (October 2013). "The inconstant gut microbiota of Drosophila species revealed by 16S rRNA gene ... These studies implicated genes such as Wingless in wing development through mutations in Wnt signalling and the Wingless gene. ... It is possible that this Spiroplasma defends D. tenebrosa against parasites, as horizontal gene transfer of defensive genes ... Other genes in the Wnt signalling pathway such as yellow and ebony are also involved in melanin regulation. Studies in the ...

Schmidt, T. M.; DeLong, E. F.; Pace, N. R. (1991-07-01). "Analysis of a marine picoplankton community by 16S rRNA gene cloning ...

"Phylogenetic reconstruction of the Felidae using 16S rRNA and NADH-5 mitochondrial genes". Journal of Molecular Evolution. 44 ( ... Yu, L. & Zhang, Y.P. (2005). "Phylogenetic studies of pantherine cats (Felidae) based on multiple genes, with novel application ... Genes & Genetic Systems. 81 (2): 115-127. doi:10.1266/ggs.81.115. PMID 16755135. Retrieved 8 September 2015. Moreno, A.; Lima- ...

... early environmental gene sequencing cloned specific genes (often the 16S rRNA gene) to produce a profile of diversity in a ... The first approach is to identify genes based upon homology with genes that are already publicly available in sequence ... "Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing". Journal of Bacteriology. 173 (14): 4371-8 ... while the human gut microbiome gene catalog identified 3.3 million genes assembled from 567.7 gigabases of sequence data. ...

2165 total genes, 2069 protein coding genes, 54 total RNA genes (45 tRNA, 6 rRNA, 3 other RNA), and 42 pseudogenes. Sechler and ... R. toxicus isolates were then made distinguishable by 16S rRNA gene sequence homology. The ISSR markers that were generated, ... A functional tunicamycin gene cluster has been identified consisting of 14 genes composing 2 separate transcriptional units. ... and 16S rRNA gene sequences. In 1998, Clavibacter toxicus was reclassified as Rathayibacter toxicus by Sasaki and colleagues. ...

Sequencing of the16S rRNA gene places Ca. "G. gigasporarum" within the Burkholderia genus. Ca. "G. gigasporarum is unculturable ...

"Phylogenetic reconstruction of the Felidae using 16S rRNA and NADH-5 mitochondrial genes". Journal of Molecular Evolution. 44 ( ... It was grouped into Ictailurus in 1997 following a study on mitochondrial genes of cat species. Today, it is still considered ...

Its type strain is SPS-243T (=LMG 22897T =CIP 108604T). The species was differentiated with the 16S rRNA gene sequence and ...

Its 16S rRNA gene sequence analysis has shown that it belongs to Massilia. "Genus: Massilia". Lpsn.dsmz.de. Retrieved 24 ...

5.8S rRNA can be used as a reference gene for miRNA detection. The 5.8S ribosomal RNA is used to better understand other rRNA ... The 5.8S rRNA is homologous to the 5' end of non-eukaryotic LSU rRNA. In eukaryotes, the insertion of ITS2 breaks LSU rRNA into ... Page for 5.8S ribosomal RNA at Rfam Arabidopsis 5.8S rRNA sequence Rice 5.8S rRNA sequence v t e (Articles with short ... Some flies have their 5.8 rRNA further split into two pieces. L567.5 rRNA structure is approximately 150 nucleotides in size ...

Insights from mitochondrial rRNA gene sequences". African Journal of Herpetology. 52 (2): 83-92. doi:10.1080/21564574.2003. ...

1993). Ultrastructure and 18S rRNA gene sequence for Pelagomonas calceolata gen. and sp. nov. and the description of a new ... 1998). Phylogenetic diversity of ultraplankton plastid Small-Subunit rRNA genes recovered in environmental nucleic acid samples ... Genomics consists in determining the complete sequence of genome of an organism and to list every gene present. It is then ... Chromophyte plastid 16S ribosomal RNA genes found in a clone library from Atlantic Ocean seawater. J. Phycol. 31: 979-988. ( ...

Based on 16S rRNA gene sequences, it is most similar to S. peroris. Martín V, Mañes-Lázaro R, Rodríguez JM, Maldonado-Barragán ...

... a versatile sequence alignment editor for both rRNA- and protein-coding genes". International Journal of Systematic and ...

"Phylogenetic Reconstruction of the Felidae Using 16S rRNA and NADH-5 Mitochondrial Genes". Journal of Molecular Evolution. 44 ( ...

A 16S rRNA gene analysis has confirmed B. ansorpii belongs to this genus. Journal of Clinical Microbiology [1] JMM Journal of ...

The characterisation is mostly done by rbcL gene and 18S rRNA sequence analysis. The algae of the genus Nannochloropsis differ ... In addition, a large proportion (15.3%) of TAG biosynthesis related genes were acquired by Nannochloropsis via horizontal gene ... There are 13 DGAT genes in Nannochloropsis, representing the highest gene dose in known genomes. Through a comprehensive ... such as the gene dose expansion of selected lipid biosynthesis genes compared to green algae Chlamydomonas. The most prominent ...

Gram-positive bacilli bacteraemia characterized by 16S rRNA gene sequencing". J. Med. Microbiol. 53 (Pt 12): 1247-1253. doi: ...