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*  5S ribosomal RNA
... the 5S rRNA gene is typically located in rRNA operons downstream of the small and large subunit rRNA, and co-transcribed into a ... The exact function of 5S rRNA is not yet clear. In Escherichia coli, 5S rRNA gene deletions reduce the protein synthesis rate ... rRNA genes. Crystallographic studies indicate that 5S rRNA-binding proteins and other proteins of the central protuberance of ... Binding between 5S rRNA and TFIIIA serves to both repress further transcription of the 5S RNA gene and stabilize the 5S RNA ...
*  Alexandrium fundyense
Sequence analysis of a fragment of the LSU rRNA gene; Journal of Phycology, 30: 991-1011. ANDERSON, D.M., KULIS, D.M., DOUCETTE ... RFLP analysis of SSU rRNA genes; Journal of Phycology, 30: 744-754. SCHOLIN, C.A., HERZOG, M., SOGIN, M. & ANDERSON, D.M. 1994 ...
*  Methanocaldococcus sp. FS406-22
The 16S rRNA gene of Methanocaldococcus sp. FS406-22, is almost 100% similar to that of Methanocaldococcus jannaschii, a non- ... It also has a GC-content of 32.04%. The 16S rRNA gene of Methanocaldococcus sp. FS406-22, is almost 100% similar to that of ... Looking further into this methanogen, it was found that the 16S rRNA gene of Methanocaldococcus sp. FS406-22, is 99% similar to ... This divergence of genes is estimated to have happened before the separation of the Domains bacteria and methanogenic archaea. ...
*  Halosimplex
nov., a unique halophilic archeon, with three 16s rRNA genes, that grows only in defined medium with glycerol and acetate or ... "Intragenomic heterogeneity and intergenomic recombination among haloarchaeal rRNA genes". Journal of Bacteriology. 186 (12): ...
*  NoRC associated RNA
Ribosomal RNA genes (rDNA) encodes for ribosomal RNA (rRNA) that constitutes the majority of the ribosome. These genes are not ... These studies confirmed that pRNA has a role gene silencing by targeting chromatin remodelling complex to a rDNA gene promoters ... "Intergenic transcripts regulate the epigenetic state of rRNA genes". Molecular Cell. 22 (3): 351-361. doi:10.1016/j.molcel. ... Gene silencing of rDNA requires binding of the chromatin remodelling complex, NoRC to a non-coding RNA (ncRNA) molecule that is ...
*  Soda lake
Tringe SG, Hugenholtz P (2008). "A renaissance for the pioneering 16S rRNA gene". Curr Opin Microbiol. 11: 442-446. doi:10.1016 ... For instance, 16S ribosomal RNA gene clone libraries revealed that the bacterial community of the lake with the highest ... For microorganisms, the phylogenetic marker gene Small Subunit (SSU) Ribosomal RNA is typically targeted, due to its good ...
*  Molecular ecology
... rapid taxonomic classification of fungal large-subunit rRNA genes". Applied and Environmental Microbiology. 78: 1523-1533. doi: ... The Good Genes Hypothesis, also referred to as the sexy son hypothesis, suggests that the females will choose a male that ... Because high gene flow was still anticipated along this cline, selection was only expected to act upon the QTLs that incur ... Therefore, the mates that are more 'attractive" are more likely to be chosen for mating and pass on their genes to the next ...
*  23S ribosomal RNA
Compared to 16S rRNA genes, 23S rRNA genes typically have higher sequence variations including insertions and/or deletions 23S ... 2009) Diversity of 23S rRNA Genes within Individual Prokaryotic Genomes. PLOS ONE 4(5): e5437. doi: 10.1371/journal.pone. ... The 23S rRNA is a 2904 nt long (in E. coli) component of the large subunit (50S) of the bacterial ribosome. The ribosomal ... Linezolid and quinupristin-dalfopristin also bind to the 23S rRNA, and cross-resistance has been demonstrated between these ...
*  Banded surili
2011). "Phylogenetic relationships of leaf monkeys (Presbytis; Colobinae) based on cytochrome b and 12S rRNA genes" (PDF). ...
*  Rhodoferax
It has 4,169 protein-coding genes, six rRNA genes, and 44 tRNA genes on the chromosome, as well as 75 pseudogenes. The plasmid ... Within the genome are 64 tRNA, and three rRNA genes. Analysis of the genome reveals the presence of two forms of rubisco. The ... These genes include a putative arsenite efflux pump and an arsenate reductase, as well as genes similar to those found in ... The genome also contains several genes suggesting R. ferrireducens may have some ability to resist exposure to metalloids and ...
*  Anopheles sinensis
2377 genes had an ortholog belonging to one of the 235 known biological pathways. There are 41 microRNA, 348 tRNA and 2017 rRNA ... It has 3,972 gene clusters containing 11,300 genes that were common to the genomes of the three previously sequenced mosquito ... possibly a significant mechanism for gene introgression in sympatric populations". Parasites & Vectors. 7 (1): 36. doi:10.1186/ ... genes. Ree, Han-Il (2005). "Studies on Anopheles sinensis, the vector species of vivax malaria in Korea". The Korean Journal of ...
*  Methanobrevibacter
"Comparison of 16S rRNA gene sequences of genus Methanobrevibacter". BMC Microbiology. 4: 20. doi:10.1186/1471-2180-4-20. Li, ... "Comparison of 16S rRNA gene sequences of genus Methanobrevibacter". BMC Microbiol. doi:10.1186/1471-2180-4-20. Retrieved 2016- ...
*  Gaffkaemia
homari by 16S rRNA gene sequence and RAPD" (PDF). Diseases of Aquatic Organisms. 63 (2-3): 237-246. doi:10.3354/dao063237. PMID ...
*  Aerococcus
homari by 16S rRNA gene sequence and RAPD" (PDF). Diseases of Aquatic Organisms. 63 (2-3): 237-246. doi:10.3354/dao063237. PMID ... Sequencing of 16S rRNA has become the gold standard for identification, but other techniques such as MALDI-TOF have also been ...
*  Otto Kandler
Kandler's group studied the cell wall composition and Woese's group the 16S rRNA gene sequences of bacteria and archaebacteria ... results of 16S rRNA gene sequencing of methanogens (Woese). While Woese's proposal to subdivide organisms into "three lines of ... Wiegel, Jürgen (1998). "Lateral Gene Exchange, an Evolutionary Mechanism for Extending the Upper or Lower Temperature Limits ... for his cell wall analyses matched perfectly with Woese's 16S rRNA sequencing results. This was the beginning of a close and ...
*  RN5S1@
1994). "5S rRNA gene hybridizes to human chromosome 1 at two sites (1q42.11→q42.13 and 1q43)". Cytogenet. Cell Genet. 68 (1-2 ... Sørensen PD, Lomholt B, Frederiksen S, Tommerup N (1991). "Fine mapping of human 5S rRNA genes to chromosome 1q42.11----q42.13 ... RNA, 5S cluster 1, also known as RN5S1@, is a human gene encoding the 5S subunit of ribosomal RNA. "Human PubMed Reference:". " ... Hori H, Osawa S, Iwabuchi M (1981). "The nucleotide sequence of 5S rRNA from a cellular slime mold Dictyostelium discoideum". ...
*  PICRUSt
A similar step predicts the copy number of 16S rRNA genes. When applying PICRUSt to a 16S rRNA gene library, PICRUSt matches ... This index reflects the average phylogenetic distance between each 16S rRNA gene sequence in their sample, and a 16S rRNA gene ... and retrieves a predicted 16S rRNA copy number and gene copy number for each gene family. The abundance of each OTU is divided ... In these cases, the shotgun metagenomic results were taken as a representation of the 'true' community, and the 16S rRNA gene ...
*  Lycopodiophyta
"Evolution of Lycopodiaceae Inferred from Spacer Sequencing of Chloroplast rRNA Genes". Russian Journal of Genetics. 37 (9): ...
*  Apicomplexa
... using small subunit rRNA gene sequences suggests they are the free-living sister group to apicomplexans". J. Eukaryot. ... "Evolutionary origin of Plasmodium and other Apicomplexa based on rRNA genes". Proc. Natl. Acad. Sci. U.S.A. 92 (13): 5793-7. ... Horizontal gene transfer appears to have occurred early on in this phylum's evolution with the transfer of a histone H4 lysine ... A second gene-H3K36 methyltransferase (Ashr3 in plants)-may have also be horizontally transferred. This has rarely been studied ...
*  Dicyemida
"Origin of the Mesozoa inferred from 18S rRNA gene sequences". Mol. Biol. Evol. 13 (8): 1128-32. doi:10.1093/oxfordjournals. ... "Origin of the Mesozoa inferred from 18S rRNA gene sequences". Mol. Biol. Evol. 13 (8): 1128-32. doi:10.1093/oxfordjournals. ... tool-kit genes in a highly simplified bilaterian". BMC Evol. Biol. 7: 201. doi:10.1186/1471-2148-7-201. PMC 2222250 . PMID ...
*  Leptospiraceae
"Species-specific identification of Leptospiraceae by 16S rRNA gene sequencing". J. Clin. Microbiol. 44 (10): 3510-6. doi: ...
*  Bryocella elongata
"Strain Bryocella elongata partial 16S rRNA gene, type strain SN10T". Type strain of Bryocella elongata at BacDive - the ... According to analysis of 16S rRNA sequence, Bryocella elongata is a member of subdivision 1 of the phylum Acidobacteria. ... 16S ribosomal RNA gene sequence similarity to members of the genera Edaphobacter and Granulicella, 93.0-93.7% similarity to ...
*  Phylum
"Origin of the Mesozoa inferred from 18S rRNA gene sequences". Mol. Biol. Evol. 13 (8): 1128-32. doi:10.1093/oxfordjournals. ...
*  Globicatella sanguinis
"Globicatella sanguinis bacteraemia identified by partial 16S rRNA gene sequencing". Scandinavian Journal of Infectious Diseases ...
*  Photobacterium profundum
Strain SS9 has 14 ribosomal RNA (rRNA) genes on chromosome 1, and 1 on chromosome 2; this is the largest number of rRNA genes ... Based on 16S rRNA sequence P. profundum is closely related to the Vibrio genus, the most prominent species being the human ... Bartlett, D.H. and T.J. Welch, ompH gene expression is regulated by multiple environmental cues in addition to high pressure in ... In strain SS9 it has been shown that several stress response genes are up regulated in response to atmospheric pressure, these ...
*  Antonius Suwanto
Microbiological and Molecular Biological Analysis Based on 16S rRNA Gene". Microbiology Indonesia. 2 (1): 17-21. doi:10.5454/mi ... Teo, J. W.; Suwanto, A; Poh, C. L. (2000). "Novel beta-lactamase genes from two environmental isolates of Vibrio harveyi". ... and gene localization". Journal of Bacteriology. 171 (11): 5840-9. PMC 210444 . PMID 2553662. Suwanto, A; Kaplan, S (1992). " ...
*  Pleurobrachia bachei
"A molecular phylogenetic framework for the phylum Ctenophora using 18S rRNA genes". Molecular Phylogenetics & Evolution. 21 (2 ...