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*  Inferring horizontal gene transfer
Koski, L. B.; Golding, G. B. (2001). "The closest BLAST hit is often not the nearest neighbor". Journal of Molecular Evolution ... Dalquen, D. A.; Anisimova, M; Gonnet, G. H.; Dessimoz, C (2012). "ALF--a simulation framework for genome evolution". Molecular ... Fletcher, W; Yang, Z (2009). "INDELible: A flexible simulator of biological sequence evolution". Molecular Biology and ... Methods in molecular biology (Clifton, N.J.). Methods in Molecular Biology. 532. pp. 227-40. doi:10.1007/978-1-60327-853-9_13. ...
*  Directed evolution
Romero, PA; Arnold, FH (December 2009). "Exploring protein fitness landscapes by directed evolution". Nature Reviews Molecular ... Directed evolution is a mimic of the natural evolution cycle in a laboratory setting. Evolution requires three things to happen ... Directed evolution (DE, "gelenkte Evolution") is a method used in protein engineering that mimics the process of natural ... Directed evolution investigates evolution in a controlled system of genes for individual enzymes, ribozymes and replicators ( ...
*  Ancestral reconstruction
"Integrating fossils with molecular phylogenies improves inference of trait evolution". Evolution. 66 (12): 3931-3944. doi: ... With respect to proteins, this allows for the investigation of the evolution of present-day molecular structure and function. ... Eyre-Walker, Adam (1998). "Problems with Parsimony in Sequences of Biased Base Composition". Journal of Molecular Evolution. 47 ... Yang, Z. (2007). "PAML 4: Phylogenetic Analysis by Maximum Likelihood". Molecular Biology and Evolution. 24 (8): 1586-1591. doi ...
*  Phylogenesis
These terms may be confused with the term phylogenetics, the application of molecular - analytical methods (i.e. molecular ... Phylogeny Phylogenetics Taxonomy Cladistics Ontogeny Evolution Mayr E. (2005). Das ist Evolution. München: Goldmann. ISBN 3-442 ... ISBN 0-87969-684-2. CS1 maint: Uses authors parameter (link) Bowler P. J. (2003). Evolution: the history of an idea (3rd ed.). ... Phylogenetics is the branch of life science concerned with the analysis of molecular sequencing data to study evolutionary ...
*  ParaHox
Molecular Biology and Evolution. 27 (10): 2386-2391. doi:10.1093/molbev/msq121. PMC 2944030 . PMID 20463047. Hui, J; et al. ( ... doi:10.1046/j.1469-7580.2001.19910013.x. Holland, P. W. H. (1 January 2012). "Evolution of homeobox genes". Wiley ... 2008). "Do cnidarians have a ParaHox cluster? Analysis of synteny around a Nematostella homeobox gene cluster". Evolution & ... although in many animals the roles of the genes have changed in evolution, notably the Gsx gene family which plays a role in ...
*  Molecular phylogenetics
Molecular phylogeny uses such data to build a "relationship tree" that shows the probable evolution of various organisms. With ... Molecular phylogenetics is one aspect of molecular systematics, a broader term that also includes the use of molecular data in ... Molecular evolution: a phylogenetic approach. Blackwell Science, Oxford. ISBN 0-86542-889-1. Soltis, P.S., Soltis, D.E., and ... ISBN 0-87893-282-8. Page, Roderic D. M.; Holmes, Edward C. (1998). Molecular evolution : a phylogenetic approach. Oxford: ...
*  Pathogenicity island
... function and impact on microbial evolution". Molecular Microbiology. 23 (6): 1089-1097. doi:10.1046/j.1365-2958.1997.3101672.x ... Hacker, J; Kaper, JB (2000). "Pathogenicity islands and the evolution of microbes". Annu Rev Microbiol. 54: 641-679. doi: ... Groisman E (1996). "Pathogenicity Islands: Bacterial Evolution in Quantum Leaps". Cell. 87: 791-794. doi:10.1016/s0092-8674(00) ... Molecular Microbiology. 29 (2): 527-43. doi:10.1046/j.1365-2958.1998.00947.x. PMID 9720870. BAC definition of pathogenicity. ...
*  Orrorin
This date is markedly different from those derived using the molecular clock approach, but has found general acceptance among ... Haviland, William A.; Prins, Harald E. L.; Walrath, Dana; McBride, Bunny (2007). Evolution and prehistory: the human challenge ... Perspectives on Hominin Evolution. ISBN 9781107019959. Senut et al. 2001 Haviland et al. 2007, p. 122 Henke 2007, pp. 1527-9 " ... as much as it still remains the most prevalent hypothesis of human evolution as of 2012. The name of genus Orrorin (plural ...
*  Weak Selection
Consequently, weak selection provides a model for describing how evolution can occur in large steps in a population in which ... 2. Kimura, M. (February 17, 1968). Evolutionary Rate at the Molecular Level.Nature, 217, 5129, 624-626. 3. Ohta, T. (December ... 10, 2002). Near-Neutrality in Evolution of Genes and Gene Regulation. Proceedings of the National Academy of Sciences of the ...
*  Genome evolution
Gillespie, John H. (1 September 1984). "Molecular Evolution Over the Mutational Landscape". Evolution. 38 (5): 1116. doi: ... Zhang, Jianzhi (2003). "Evolution by gene duplication: an update". Trends in Ecology & Evolution. 18 (6): 292-298. doi:10.1016/ ... Methods in molecular biology (Clifton, N.J.). Methods in Molecular Biology. 804: 57-80. doi:10.1007/978-1-61779-361-5_4. ISBN ... Evolution; international journal of organic evolution. 56 (1): 121-30. doi:10.1111/j.0014-3820.2002.tb00854.x. PMID 11913657. ...
*  Molecular evolution
Other journals dedicated to molecular evolution include Journal of Molecular Evolution and Molecular Phylogenetics and ... Genome evolution Heterotachy History of molecular evolution Horizontal gene transfer Human evolution Molecular clock Molecular ... The Society for Molecular Biology and Evolution publishes the journals "Molecular Biology and Evolution" and "Genome Biology ... Nei, M. (2005). "Selectionism and Neutralism in Molecular Evolution". Molecular Biology and Evolution. 22 (12): 2318-2342. doi: ...
*  Journal of Molecular Evolution
... rapidly developing areas of molecular evolution such as molecular developmental biology and work connecting molecular evolution ... The Journal of Molecular Evolution is a peer-reviewed scientific journal that covers molecular evolution. The journal is ... 48 (1999), p. 1 Lehman, Niles (2013). "Editorial Changes at the Journal of Molecular Evolution". Journal of Molecular Evolution ... the purview of several other molecular evolution journals, most significantly Molecular Phylogenetics and Evolution), except in ...
*  History of molecular evolution
... and the Challenges of Molecular Evolution", pp. 335-339 Dietrich, "The Origins of the Neutral Theory of Molecular Evolution", ... The history of molecular evolution starts in the early 20th century with "comparative biochemistry", but the field of molecular ... Molecular evolutionists were finding that while rates of protein evolution (consistent with the molecular clock) were fairly ... Molecular evolution in general-and the molecular clock in particular-offered little basis for exploring evolutionary causation ...
*  Neutral theory of molecular evolution
Kimura argued that molecular evolution is dominated by selectively neutral evolution but at the phenotypic level, changes in ... Adaptive evolution in the human genome Coalescent theory Masatoshi Nei Motoo Kimura Molecular evolution Nearly neutral theory ... 1969). Non-Darwinian Evolution. Science 164:788-97. Zuckerkandl, E. and Pauling, L.B. (1962). "Molecular disease, evolution, ... The neutral theory of molecular evolution holds that at the molecular level most evolutionary changes and most of the variation ...
*  The Neutral Theory of Molecular Evolution
... and the rate of evolution Population genetics at the molecular level Summary and conclusion Molecular evolution Molecular clock ... Journal of Molecular Evolution. 82: 51-64 - via EbscoHost. Kimura, M. (1983). The Neutral Theory of Molecular Evolution. ... While the neutral theory of molecular evolution existed since his article in 1968, Kimura felt the need to write a monograph ... This concept (also brought to prominence by Motoo Kimura (1979) in his expansion of the Neutral Theory of Molecular Evolution ( ...
*  Nearly neutral theory of molecular evolution
History of molecular evolution The Nearly Neutral Theory of Molecular Evolution - Perspectives on Molecular Evolution. ... The nearly neutral theory of molecular evolution is a modification of the neutral theory of molecular evolution that accounts ... According to the neutral theory of molecular evolution, the rate at which molecular changes accumulate between species should ... the neutral theory predicts that their rate of molecular evolution should be slower. However, molecular evolutionists found ...
*  Evolution of molecular chaperones
Since they are so widespread and ancient, they can be used as molecular markers in studies of ancient cellular evolution. ... Genome Biology and Evolution. 2 (0): 609-619. doi:10.1093/gbe/evq045. Gupta, RS (January 1995). "Evolution of the chaperonin ... These results illustrate a model in which evolution can act on the phenotype of a protein while the deleterious effect of the ... Chaperones, also called molecular chaperones, are proteins that assist other proteins in assuming their three-dimensional fold ...
*  Molecular Phylogenetics and Evolution
... is a peer-reviewed scientific journal of evolutionary biology and phylogenetics. The ...
*  Molecular Biology and Evolution
Evolution, The Society for Molecular Biology &. "Molecular Biology and Evolution". www.smbe.org. Retrieved 2017-10-20. "About ... Official website Submission website Society for Molecular Biology and Evolution Guide to the Molecular Biology and Evolution ... Molecular Biology and Evolution , Oxford Academic". academic.oup.com. Retrieved 2017-10-20. "Molecular Biology and Evolution". ... Molecular Biology and Evolution is a monthly peer-reviewed scientific journal published by Oxford University Press on behalf of ...
*  Society for Molecular Biology and Evolution
"Molecular Biology and Evolution , Oxford Academic". OUP Academic. Retrieved 2017-10-20. "Genome Biology and Evolution , Oxford ... The Society for Molecular Biology and Evolution (SMBE) is a scientific and academic organization created in 1982 to support ... In 1983, the society began publishing the journal Molecular Biology and Evolution with Oxford University Press. With the rapid ... academic research in the field of molecular evolution. The society hosts an annual meeting, typically in June or July. It also ...
*  List of University of Oregon faculty and staff
Kenneth, Chang (2006-04-07). "Study, in a First, Explains Evolution's Molecular Advance". The New York Times. Retrieved March ...
*  Joseph Thornton (biologist)
Finnigan, G. C.; Hanson-Smith, V.; Stevens, T. H.; Thornton, J. W. (2012). "Evolution of increased complexity in a molecular ... Chang, Kenneth (April 7, 2006). "Study, in a First, Explains Evolution's Molecular Advance". New York Times. New York. Begley, ... Zimmer, Carl (September 28, 2009). "Can Evolution Run in Reverse? A Study Says It's a One-Way Street". New York Times. New York ... Ortlund, E. A.; Bridgham, J. T.; Redinbo, M. R.; Thornton, J. W. (2007). "Crystal structure of an ancient protein: Evolution by ...
*  Pseudogene
Molecular evolution Molecular paleontology Retroposon Retrotransposon Max EE (1986). "Plagiarized Errors and Molecular Genetics ... Zhang J (2003). "Evolution by gene duplication: an update". Trends in Ecology and Evolution. 18 (6): 292-298. doi:10.1016/S0169 ... Journal of Molecular Evolution. 28 (4): 279-85. doi:10.1007/BF02103423. PMID 2499684. Baertsch R, Diekhans M, Kent WJ, Haussler ... Molecular Biology and Evolution. 19 (5): 654-63. doi:10.1093/oxfordjournals.molbev.a004124. PMID 11961099. Okuda H, Tsujimura A ...
*  Genome size
Molecular Evolution. Sinauer Associates, Inc., Sunderland. pp. 179-199. Greilhuber J, Doležel J, Lysák M, Bennett MD; Dolezel; ... The Evolution of the Genome. San Diego: Elsevier. pp. 89-162. Gregory TR (2005). "Genome size evolution in animals". In T.R. ... Molecular Biology and Evolution. 16 (9): 1178-1191. doi:10.1093/oxfordjournals.molbev.a026208. PMID 10486973. Animal Genome ... The Evolution of the Genome. San Diego: Elsevier. pp. 3-87. Hou Y, Lin S; Lin (2009). Redfield, Rosemary Jeanne, ed. "Distinct ...
*  Altitude
October 2009). "Parallel evolution in the major haemoglobin genes of eight species of Andean waterfowl". Molecular Evolution. ...
*  Neonauclea
Molecular Phylogenetics and Evolution 56(1):21-39. doi:10.1016/j.ympev.2010.04.002 Neonauclea At: Search Page At: World ... Molecular phylogenetic studies indicate that some related genera are probably embedded in it. The following species list may be ...
*  William F. Martin
Martin is a distinguished and sometimes controversial contributor to the field of molecular evolution. He is known particularly ... for contributions to understanding the origin and evolution of eukaryotic cells. Martin is co-author, with Miklos Mueller of ... "Gene transfer to the nucleus and the evolution of chloroplasts". Nature. 393: 162-165. Race, HL; Herrmann, RG; Martin, W (1999 ... currently Head of the Institut für Molekulare Evolution, Heinrich Heine Universität, Düsseldorf. Born in Bethesda, Maryland, ...